| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
DQ394807 |
Definition |
Lactococcus phage ul36.k1t1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
35594 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.73 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABD63724.1 | DQ394807_p30 | unknown | phrog_2275 | unknown function | unknown function | 1 | 15170 | 15478 |
| ABD63707.1 | DQ394807_p12 | unknown | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 6857 | 7030 |
| ABD63732.1 | DQ394807_p39 | unknown | phrog_541 | head-tail adaptor | connector | 1 | 22721 | 23122 |
| ABD63710.1 | DQ394807_p15 | replisome organizer | phrog_5708 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9167 | 9949 |
| ABL67434.1 | DQ394807_p24 | unknown | phrog_10155 | unknown function | unknown function | 1 | 12702 | 13067 |
| ABD63716.1 | DQ394807_p21 | unknown | phrog_16505 | unknown function | unknown function | 1 | 11811 | 11969 |
| ABD63746.1 | DQ394807_p53 | unknown | phrog_26180 | unknown function | unknown function | -1 | 35201 | 35404 |
| ABD63700.1 | DQ394807_p5 | cI repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3843 | 4370 |
| ABD63706.1 | DQ394807_p11 | unknown | phrog_5450 | unknown function | unknown function | 1 | 6590 | 6826 |
| ABD63744.1 | DQ394807_p51 | holin | phrog_297 | holin | lysis | 1 | 33608 | 33874 |
| ABD63739.1 | DQ394807_p46 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 25880 | 28489 |
| ABD63699.1 | DQ394807_p4 | unknown | phrog_87 | metallo-protease | other | -1 | 3246 | 3833 |
| ABD63712.1 | DQ394807_p17 | unknown | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10671 | 11060 |
| ABD63702.1 | DQ394807_p7 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 4894 | 5610 |
| ABD63730.1 | DQ394807_p36 | unknown | phrog_3017 | head maturation protease | head and packaging | 1 | 20401 | 21450 |
| ABD63713.1 | DQ394807_p18 | unknown | phrog_3109 | unknown function | unknown function | 1 | 11063 | 11302 |
| ABD63729.1 | DQ394807_p35 | unknown | phrog_2468 | head morphogenesis | head and packaging | 1 | 19555 | 20385 |
| ABD63737.1 | DQ394807_p44 | unknown | phrog_1061 | unknown function | unknown function | 1 | 24760 | 25167 |
| ABD63718.1 | DQ394807_p23 | unknown | phrog_121 | unknown function | unknown function | 1 | 12163 | 12705 |
| ABD63734.1 | DQ394807_p41 | unknown | phrog_556 | minor head protein | head and packaging | 1 | 23453 | 23782 |
| ABD63715.1 | DQ394807_p20 | unknown | phrog_7446 | unknown function | unknown function | 1 | 11628 | 11798 |
| ABD63701.1 | DQ394807_p6 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4643 | 4867 |
| ABD63726.1 | DQ394807_p32 | activator of late transcription | phrog_309 | terminase small subunit | head and packaging | 1 | 16115 | 16588 |
| ABD63736.1 | DQ394807_p43 | major capsid protein | phrog_820 | major tail protein | tail | 1 | 24227 | 24703 |
| ABD63731.1 | DQ394807_p37 | unknown | phrog_1623 | virion structural protein | head and packaging | 1 | 21465 | 22382 |
| ABD63735.1 | DQ394807_p42 | unknown | phrog_913 | minor head protein | head and packaging | 1 | 23782 | 24216 |
| ABD63717.1 | DQ394807_p22 | unknown | phrog_16544 | excisionase | integration and excision | 1 | 11988 | 12170 |
| ABD63696.1 | DQ394807_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 502 | 1581 |
| ABD63705.1 | DQ394807_p10 | unknown | phrog_6258 | unknown function | unknown function | -1 | 6209 | 6487 |
| ABD63697.1 | DQ394807_p2 | unknown | phrog_7115 | unknown function | unknown function | -1 | 1701 | 2075 |
| ABD63719.1 | DQ394807_p25 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 13064 | 13483 |
| ABD63698.1 | DQ394807_p3 | unknown | phrog_17949 | unknown function | unknown function | -1 | 2118 | 3185 |
| ABD63711.1 | DQ394807_p16 | unknown | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9949 | 10674 |
| ABD63741.1 | DQ394807_p48 | antireceptor | phrog_6468 | tail fiber protein; host specificity | tail | 1 | 30025 | 33108 |
| ABD63704.1 | DQ394807_p9 | unknown | phrog_7263 | unknown function | unknown function | 1 | 6021 | 6254 |
| ABD63742.1 | DQ394807_p49 | unknown | phrog_8250 | unknown function | unknown function | 1 | 33120 | 33356 |
| ABD63727.1 | DQ394807_p33 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 16569 | 18020 |
| ABD63708.1 | DQ394807_p13 | sak | phrog_252 | Bet-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7134 | 7871 |
| ABD63722.1 | DQ394807_p28 | unknown | phrog_7406 | unknown function | unknown function | 1 | 14611 | 14829 |
| ABD63723.1 | DQ394807_p29 | unknown | phrog_2670 | unknown function | unknown function | 1 | 14826 | 15041 |
| ABD63714.1 | DQ394807_p19 | unknown | phrog_5080 | unknown function | unknown function | 1 | 11413 | 11619 |
| ABD63743.1 | DQ394807_p50 | holin | phrog_689 | holin | lysis | 1 | 33369 | 33611 |
| ABD63740.1 | DQ394807_p47 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 28499 | 30028 |
| ABD63720.1 | DQ394807_p26 | unknown | phrog_6209 | unknown function | unknown function | 1 | 13487 | 13846 |
| ABD63728.1 | DQ394807_p34 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 18033 | 19562 |
| ABD63725.1 | DQ394807_p31 | unknown | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 15555 | 15944 |
| ABD63733.1 | DQ394807_p40 | unknown | phrog_793 | head-tail adaptor | connector | 1 | 23112 | 23456 |
| ABD63745.1 | DQ394807_p52 | endolysin | phrog_291 | endolysin | lysis | 1 | 33871 | 35160 |
| ABD63721.1 | DQ394807_p27 | unknown | phrog_1071 | DNA methyltransferase | other | 1 | 13873 | 14592 |
| ABD63709.1 | DQ394807_p14 | unknown | phrog_674 | unknown function | unknown function | 1 | 7846 | 8940 |
| ABL67435.1 | DQ394807_p38 | unknown | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 22411 | 22647 |
| ABD63738.1 | DQ394807_p45 | unknown | phrog_706 | unknown function | unknown function | 1 | 25183 | 25890 |
| ABD63703.1 | DQ394807_p8 | unknown | phrog_823 | unknown function | unknown function | 1 | 5623 | 5958 |