Genomic map of Lactococcus phage ul36.t1k1 (DQ394809)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
DQ394809
Definition
Lactococcus phage ul36.t1k1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
34897
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
35.83
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ABD63820.1 DQ394809_p23 unknown phrog_10155 unknown function unknown function 1 12182 12547
ABD63840.1 DQ394809_p43 unknown phrog_1061 unknown function unknown function 1 24240 24647
ABD63848.1 DQ394809_p51 endolysin phrog_998 endolysin lysis 1 33511 34290
ABD63835.1 DQ394809_p38 unknown phrog_541 head-tail adaptor connector 1 22201 22602
ABD63821.1 DQ394809_p24 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 12544 12963
ABD63804.1 DQ394809_p6 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 4643 4867
ABD63819.1 DQ394809_p22 unknown phrog_121 unknown function unknown function 1 11643 12185
ABD63830.1 DQ394809_p33 portal protein phrog_12 portal protein head and packaging 1 17513 19042
ABD63833.1 DQ394809_p36 unknown phrog_1623 virion structural protein head and packaging 1 20945 21862
ABD63845.1 DQ394809_p48 unknown phrog_8250 unknown function unknown function 1 32600 32836
ABL67436.1 DQ394809_p19 unknown phrog_7446 unknown function unknown function 1 11108 11278
ABD63810.1 DQ394809_p12 unknown phrog_4416 transcriptional regulator transcription regulation 1 6857 7030
ABD63822.1 DQ394809_p25 unknown phrog_6209 unknown function unknown function 1 12967 13326
ABD63837.1 DQ394809_p40 unknown phrog_556 minor head protein head and packaging 1 22933 23262
ABD63815.1 DQ394809_p17 unknown phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10375 10785
ABD63841.1 DQ394809_p44 unknown phrog_706 unknown function unknown function 1 24663 25370
ABD63803.1 DQ394809_p5 cI-like repressor phrog_8 transcriptional regulator transcription regulation -1 3843 4370
ABD63802.1 DQ394809_p4 unknown phrog_87 metallo-protease other -1 3246 3833
ABD63809.1 DQ394809_p11 unknown phrog_5450 unknown function unknown function 1 6590 6826
ABD63828.1 DQ394809_p31 unknown phrog_309 terminase small subunit head and packaging 1 15595 16068
ABD63808.1 DQ394809_p10 unknown phrog_6258 unknown function unknown function -1 6209 6487
ABD63799.1 DQ394809_p1 integrase phrog_1 integrase integration and excision -1 502 1581
ABD63817.1 DQ394809_p20 unknown phrog_16505 unknown function unknown function 1 11291 11449
ABD63807.1 DQ394809_p9 unknown phrog_7263 unknown function unknown function 1 6021 6254
ABD63826.1 DQ394809_p29 unknown phrog_2275 unknown function unknown function 1 14650 14958
ABD63829.1 DQ394809_p32 terminase large subunit phrog_38 terminase large subunit head and packaging 1 16049 17500
ABD63831.1 DQ394809_p34 unknown phrog_2468 head morphogenesis head and packaging 1 19035 19865
ABD63816.1 DQ394809_p18 unknown phrog_5080 unknown function unknown function 1 10893 11099
ABD63827.1 DQ394809_p30 unknown phrog_2198 Alt-like transcription activator transcription regulation 1 15035 15424
ABD63843.1 DQ394809_p46 tail protein phrog_202 distal tail protein Dit tail 1 27979 29508
ABD63811.1 DQ394809_p13 sak phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7132 7869
ABD63846.1 DQ394809_p49 unknown phrog_1893 unknown function unknown function 1 32849 33199
ABD63814.1 DQ394809_p16 unknown phrog_23225 unknown function unknown function 1 10120 10362
ABD63844.1 DQ394809_p47 receptor binding protein phrog_6468 tail fiber protein; host specificity tail 1 29505 32588
ABD63847.1 DQ394809_p50 holin phrog_263 holin lysis 1 33212 33511
ABD63806.1 DQ394809_p8 unknown phrog_823 unknown function unknown function 1 5623 5958
ABD63825.1 DQ394809_p28 unknown phrog_2670 unknown function unknown function 1 14306 14521
ABD63832.1 DQ394809_p35 unknown phrog_3017 head maturation protease head and packaging 1 19881 20930
ABD63836.1 DQ394809_p39 unknown phrog_793 head-tail adaptor connector 1 22592 22936
ABD63813.1 DQ394809_p15 replicase phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 9228 10127
ABD63838.1 DQ394809_p41 unknown phrog_913 minor head protein head and packaging 1 23262 23696
ABD63834.1 DQ394809_p37 unknown phrog_215 structural protein with Ig domain head and packaging 1 21891 22127
ABD63800.1 DQ394809_p2 unknown phrog_7115 unknown function unknown function -1 1701 2075
ABD63842.1 DQ394809_p45 tape measure protein phrog_58 tail length tape measure protein tail 1 25360 27969
ABD63801.1 DQ394809_p3 unknown phrog_17949 unknown function unknown function -1 2118 3185
ABD63805.1 DQ394809_p7 unknown phrog_373 anti-repressor transcription regulation 1 4894 5610
ABD63823.1 DQ394809_p26 unknown phrog_1071 DNA methyltransferase other 1 13353 14072
ABD63839.1 DQ394809_p42 major capsid protein phrog_820 major tail protein tail 1 23707 24183
ABD63818.1 DQ394809_p21 excisionase phrog_16544 excisionase integration and excision 1 11468 11650
ABD63812.1 DQ394809_p14 unknown phrog_674 unknown function unknown function 1 7844 8938
ABD63824.1 DQ394809_p27 unknown phrog_7406 unknown function unknown function 1 14091 14309