| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
DQ394809 |
Definition |
Lactococcus phage ul36.t1k1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
34897 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
35.83 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABD63820.1 | DQ394809_p23 | unknown | phrog_10155 | unknown function | unknown function | 1 | 12182 | 12547 |
| ABD63840.1 | DQ394809_p43 | unknown | phrog_1061 | unknown function | unknown function | 1 | 24240 | 24647 |
| ABD63848.1 | DQ394809_p51 | endolysin | phrog_998 | endolysin | lysis | 1 | 33511 | 34290 |
| ABD63835.1 | DQ394809_p38 | unknown | phrog_541 | head-tail adaptor | connector | 1 | 22201 | 22602 |
| ABD63821.1 | DQ394809_p24 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 12544 | 12963 |
| ABD63804.1 | DQ394809_p6 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4643 | 4867 |
| ABD63819.1 | DQ394809_p22 | unknown | phrog_121 | unknown function | unknown function | 1 | 11643 | 12185 |
| ABD63830.1 | DQ394809_p33 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 17513 | 19042 |
| ABD63833.1 | DQ394809_p36 | unknown | phrog_1623 | virion structural protein | head and packaging | 1 | 20945 | 21862 |
| ABD63845.1 | DQ394809_p48 | unknown | phrog_8250 | unknown function | unknown function | 1 | 32600 | 32836 |
| ABL67436.1 | DQ394809_p19 | unknown | phrog_7446 | unknown function | unknown function | 1 | 11108 | 11278 |
| ABD63810.1 | DQ394809_p12 | unknown | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 6857 | 7030 |
| ABD63822.1 | DQ394809_p25 | unknown | phrog_6209 | unknown function | unknown function | 1 | 12967 | 13326 |
| ABD63837.1 | DQ394809_p40 | unknown | phrog_556 | minor head protein | head and packaging | 1 | 22933 | 23262 |
| ABD63815.1 | DQ394809_p17 | unknown | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10375 | 10785 |
| ABD63841.1 | DQ394809_p44 | unknown | phrog_706 | unknown function | unknown function | 1 | 24663 | 25370 |
| ABD63803.1 | DQ394809_p5 | cI-like repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3843 | 4370 |
| ABD63802.1 | DQ394809_p4 | unknown | phrog_87 | metallo-protease | other | -1 | 3246 | 3833 |
| ABD63809.1 | DQ394809_p11 | unknown | phrog_5450 | unknown function | unknown function | 1 | 6590 | 6826 |
| ABD63828.1 | DQ394809_p31 | unknown | phrog_309 | terminase small subunit | head and packaging | 1 | 15595 | 16068 |
| ABD63808.1 | DQ394809_p10 | unknown | phrog_6258 | unknown function | unknown function | -1 | 6209 | 6487 |
| ABD63799.1 | DQ394809_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 502 | 1581 |
| ABD63817.1 | DQ394809_p20 | unknown | phrog_16505 | unknown function | unknown function | 1 | 11291 | 11449 |
| ABD63807.1 | DQ394809_p9 | unknown | phrog_7263 | unknown function | unknown function | 1 | 6021 | 6254 |
| ABD63826.1 | DQ394809_p29 | unknown | phrog_2275 | unknown function | unknown function | 1 | 14650 | 14958 |
| ABD63829.1 | DQ394809_p32 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 16049 | 17500 |
| ABD63831.1 | DQ394809_p34 | unknown | phrog_2468 | head morphogenesis | head and packaging | 1 | 19035 | 19865 |
| ABD63816.1 | DQ394809_p18 | unknown | phrog_5080 | unknown function | unknown function | 1 | 10893 | 11099 |
| ABD63827.1 | DQ394809_p30 | unknown | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 15035 | 15424 |
| ABD63843.1 | DQ394809_p46 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 27979 | 29508 |
| ABD63811.1 | DQ394809_p13 | sak | phrog_252 | Bet-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7132 | 7869 |
| ABD63846.1 | DQ394809_p49 | unknown | phrog_1893 | unknown function | unknown function | 1 | 32849 | 33199 |
| ABD63814.1 | DQ394809_p16 | unknown | phrog_23225 | unknown function | unknown function | 1 | 10120 | 10362 |
| ABD63844.1 | DQ394809_p47 | receptor binding protein | phrog_6468 | tail fiber protein; host specificity | tail | 1 | 29505 | 32588 |
| ABD63847.1 | DQ394809_p50 | holin | phrog_263 | holin | lysis | 1 | 33212 | 33511 |
| ABD63806.1 | DQ394809_p8 | unknown | phrog_823 | unknown function | unknown function | 1 | 5623 | 5958 |
| ABD63825.1 | DQ394809_p28 | unknown | phrog_2670 | unknown function | unknown function | 1 | 14306 | 14521 |
| ABD63832.1 | DQ394809_p35 | unknown | phrog_3017 | head maturation protease | head and packaging | 1 | 19881 | 20930 |
| ABD63836.1 | DQ394809_p39 | unknown | phrog_793 | head-tail adaptor | connector | 1 | 22592 | 22936 |
| ABD63813.1 | DQ394809_p15 | replicase | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9228 | 10127 |
| ABD63838.1 | DQ394809_p41 | unknown | phrog_913 | minor head protein | head and packaging | 1 | 23262 | 23696 |
| ABD63834.1 | DQ394809_p37 | unknown | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 21891 | 22127 |
| ABD63800.1 | DQ394809_p2 | unknown | phrog_7115 | unknown function | unknown function | -1 | 1701 | 2075 |
| ABD63842.1 | DQ394809_p45 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 25360 | 27969 |
| ABD63801.1 | DQ394809_p3 | unknown | phrog_17949 | unknown function | unknown function | -1 | 2118 | 3185 |
| ABD63805.1 | DQ394809_p7 | unknown | phrog_373 | anti-repressor | transcription regulation | 1 | 4894 | 5610 |
| ABD63823.1 | DQ394809_p26 | unknown | phrog_1071 | DNA methyltransferase | other | 1 | 13353 | 14072 |
| ABD63839.1 | DQ394809_p42 | major capsid protein | phrog_820 | major tail protein | tail | 1 | 23707 | 24183 |
| ABD63818.1 | DQ394809_p21 | excisionase | phrog_16544 | excisionase | integration and excision | 1 | 11468 | 11650 |
| ABD63812.1 | DQ394809_p14 | unknown | phrog_674 | unknown function | unknown function | 1 | 7844 | 8938 |
| ABD63824.1 | DQ394809_p27 | unknown | phrog_7406 | unknown function | unknown function | 1 | 14091 | 14309 |