Genomic map of Lactococcus phage P335 (P335) (DQ838728)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
DQ838728
Definition
Lactococcus phage P335, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
33613
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
35.48
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ABI54248.1 DQ838728_p45 base plate protein phrog_5983 tail protein tail 1 27953 28786
ABI54229.1 DQ838728_p26 unknown singleton unknown function unknown function 1 11628 12338
AAR14304.2 DQ838728_p6 SSB phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 2480 2830
ABI54249.1 DQ838728_p46 antireceptor phrog_6465 tail protein tail 1 28806 29288
ABI54237.1 DQ838728_p34 unknown phrog_132 head-tail adaptor connector 1 18556 18888
ABI54250.1 DQ838728_p47 unknown phrog_689 holin lysis 1 29371 29595
ABI54228.1 DQ838728_p25 unknown phrog_7693 acetyltransferase other 1 11136 11516
ABI54212.1 DQ838728_p9 RusA resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 3965 4354
ABI54242.1 DQ838728_p39 unknown phrog_183 tail chaperone protein tail 1 20562 20912
ABI54241.1 DQ838728_p38 major tail protein phrog_238 major tail protein tail 1 19949 20446
ABI54223.1 DQ838728_p20 unknown phrog_6072 unknown function unknown function 1 8519 8764
ABI54208.1 DQ838728_p2 unknown singleton unknown function unknown function 1 852 1160
ABI54234.1 DQ838728_p31 scaffolding protein phrog_2932 head scaffolding protein head and packaging 1 16890 17552
ABI54216.1 DQ838728_p13 unknown phrog_4314 unknown function unknown function 1 5323 5502
ABI54215.1 DQ838728_p12 unknown phrog_1709 unknown function unknown function 1 4916 5224
ABI54236.1 DQ838728_p33 unknown phrog_2250 unknown function unknown function 1 18372 18572
ABI54211.1 DQ838728_p8 unknown phrog_7699 unknown function unknown function 1 3754 3975
ABI54209.1 DQ838728_p3 transcriptional regulator singleton unknown function unknown function 1 1190 1324
ABI54244.1 DQ838728_p41 tape measure protein phrog_58 tail length tape measure protein tail 1 21281 23494
ABI54251.1 DQ838728_p48 neck passage structure phrog_28468 minor head protein head and packaging 1 29607 31583
ABI54232.1 DQ838728_p29 portal protein phrog_64 portal protein head and packaging 1 14370 15728
ABI54213.1 DQ838728_p10 unknown singleton unknown function unknown function 1 4359 4664
ABI54239.1 DQ838728_p36 structural protein phrog_5 tail completion or Neck1 protein connector 1 19193 19552
ABI54225.1 DQ838728_p22 transcriptional regulator phrog_2198 Alt-like transcription activator transcription regulation 1 9112 9534
ABI54210.1 DQ838728_p7 replication protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 2964 3773
ABI54224.1 DQ838728_p21 unknown singleton unknown function unknown function 1 8940 9035
ABI54231.1 DQ838728_p28 large terminase subunit phrog_38 terminase large subunit head and packaging 1 12981 14369
ABI54221.1 DQ838728_p18 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7467 7997
ABI54220.1 DQ838728_p17 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 7029 7448
ABI54230.1 DQ838728_p27 small terminase subunit phrog_309 terminase small subunit head and packaging 1 12500 12988
ABI54243.1 DQ838728_p40 unknown phrog_441 tail assembly chaperone tail 1 20996 21265
ABI54217.1 DQ838728_p14 unknown phrog_4149 unknown function unknown function 1 5492 6061
ABI54214.1 DQ838728_p11 unknown phrog_3109 unknown function unknown function 1 4661 4900
ABI54246.1 DQ838728_p43 tail associated lysin phrog_1067 minor head protein head and packaging 1 24265 27021
ABI54240.1 DQ838728_p37 structural protein phrog_176 tail terminator connector 1 19549 19938
ABI54227.1 DQ838728_p24 ABC-transporter phrog_293 ABC transporter moron, auxiliary metabolic gene and host takeover 1 10462 11139
ABI54222.1 DQ838728_p19 unknown phrog_6209 unknown function unknown function 1 8000 8497
ABI54226.1 DQ838728_p23 unknown phrog_620 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 9959 10483
ABI54219.1 DQ838728_p16 unknown phrog_121 unknown function unknown function 1 6460 7032
ABI54238.1 DQ838728_p35 unknown phrog_348 minor head protein head and packaging 1 18885 19196
ABI54253.1 DQ838728_p50 endolysin phrog_291 endolysin lysis 1 32074 33369
ABI54245.1 DQ838728_p42 distal tail protein phrog_33 distal tail protein Dit tail 1 23504 24265
AAR14302.1 DQ838728_p4 unknown phrog_4729 unknown function unknown function 1 1466 1861
ABI54247.1 DQ838728_p44 base plate protein phrog_8913 minor head protein head and packaging 1 27034 28002
ABI54207.1 DQ838728_p1 cro/cI like repressor phrog_3 transcriptional repressor transcription regulation 1 587 808
ABI54235.1 DQ838728_p32 major capsid protein phrog_544 major head protein head and packaging 1 17554 18372
ABI54218.1 DQ838728_p15 unknown phrog_98 unknown function unknown function 1 6072 6467
ABI54233.1 DQ838728_p30 minor capsid protein phrog_115 minor head protein head and packaging 1 15732 16775
AAR14303.1 DQ838728_p5 Erf recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 1872 2480
ABI54252.1 DQ838728_p49 holin phrog_297 holin lysis 1 31811 32077