| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
EF506570 |
Definition |
Spiroplasma kunkelii virus SkV1_CR2-3x, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Plectroviridae; Vespertiliovirus. |
DB of origin |
NUCCORE |
Length |
7870 |
Host Name |
Spiroplasma |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
13 |
%GC |
22.21 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABU40631.1 | EF506570_p3 | unknown | phrog_16578 | unknown function | unknown function | 1 | 482 | 730 |
| ABU40629.1 | EF506570_p10 | unknown | phrog_7654 | unknown function | unknown function | 1 | 3213 | 3590 |
| ABU40634.1 | EF506570_p8 | unknown | phrog_12405 | unknown function | unknown function | 1 | 2004 | 2207 |
| ABU40630.1 | EF506570_p4 | unknown | phrog_38090 | unknown function | unknown function | 1 | 1082 | 1381 |
| ABU40637.1 | EF506570_p1 | unknown | phrog_21884 | unknown function | unknown function | 1 | 90 | 200 |
| ABU40628.1 | EF506570_p5 | unknown | phrog_15243 | unknown function | unknown function | 1 | 1369 | 1851 |
| ABU40627.1 | EF506570_p9 | unknown | phrog_11343 | unknown function | unknown function | 1 | 2207 | 3220 |
| ABU40626.1 | EF506570_p13 | unknown | phrog_8463 | transposase | integration and excision | 1 | 6624 | 7712 |
| ABU40625.1 | EF506570_p12 | unknown | phrog_14869 | unknown function | unknown function | 1 | 3838 | 6024 |
| ABU40632.1 | EF506570_p11 | unknown | phrog_5673 | unknown function | unknown function | 1 | 3590 | 3826 |
| ABU40633.1 | EF506570_p2 | unknown | phrog_16020 | unknown function | unknown function | 1 | 249 | 482 |
| ABU40635.1 | EF506570_p7 | unknown | phrog_15292 | unknown function | unknown function | 1 | 1862 | 2023 |
| ABU40636.1 | EF506570_p6 | unknown | phrog_13382 | transmembrane protein | other | 1 | 1852 | 2001 |