| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
EU056923 |
Definition |
Pseudomonas phage PT5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus PT5. |
DB of origin |
PVOG |
Length |
42954 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
62.33 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABW23114.1 | EU056923_p35 | hypothetical protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23524 | 24492 |
| ABW23119.1 | EU056923_p40 | injection needle component | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29231 | 31927 |
| ABW23081.1 | EU056923_p2 | hypothetical protein | phrog_7124 | unknown function | unknown function | 1 | 2020 | 2247 |
| ABW23105.1 | EU056923_p26 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 16824 | 17870 |
| ABW23094.1 | EU056923_p15 | hypothetical protein | phrog_23126 | unknown function | unknown function | 1 | 7499 | 7702 |
| ABW23111.1 | EU056923_p32 | hypothetical protein | phrog_3112 | virion structural protein | head and packaging | 1 | 21680 | 21976 |
| ABW23112.1 | EU056923_p33 | hypothetical protein | phrog_18808 | unknown function | unknown function | 1 | 21897 | 22064 |
| ABW23095.1 | EU056923_p16 | hypothetical protein | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 7675 | 8499 |
| ABW23118.1 | EU056923_p39 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 28686 | 29231 |
| ABW23113.1 | EU056923_p34 | hypothetical protein | phrog_449 | head-tail adaptor | connector | 1 | 21988 | 23520 |
| ABW23098.1 | EU056923_p19 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 10343 | 11290 |
| ABW23120.1 | EU056923_p41 | internal core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 31955 | 35944 |
| ABW23123.1 | EU056923_p44 | structural protein | phrog_4176 | tail fiber protein | tail | 1 | 37215 | 38060 |
| ABW23125.1 | EU056923_p46 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 38669 | 38974 |
| ABW23104.1 | EU056923_p25 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16387 | 16827 |
| ABW23088.1 | EU056923_p9 | hypothetical protein | phrog_4342 | unknown function | unknown function | 1 | 4649 | 4942 |
| ABW23082.1 | EU056923_p3 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 2258 | 2797 |
| ABW23122.1 | EU056923_p43 | hypothetical protein | phrog_8874 | tail fiber protein | tail | 1 | 36701 | 37159 |
| ABW23091.1 | EU056923_p12 | DNA-binding protein | phrog_6982 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5868 | 6677 |
| ABW23108.1 | EU056923_p29 | DNA-dependent RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18400 | 20850 |
| ABW23124.1 | EU056923_p45 | hypothetical protein | phrog_4950 | tail fiber protein | tail | 1 | 38064 | 38669 |
| ABW23097.1 | EU056923_p18 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 9726 | 10343 |
| ABW23089.1 | EU056923_p10 | hypothetical protein | phrog_5433 | unknown function | unknown function | 1 | 5021 | 5437 |
| ABW23083.1 | EU056923_p4 | hypothetical protein | phrog_6951 | unknown function | unknown function | 1 | 3165 | 3533 |
| ABW23100.1 | EU056923_p21 | DNA directed DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11619 | 14042 |
| ABW23126.1 | EU056923_p47 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38983 | 40788 |
| ABW23092.1 | EU056923_p13 | hypothetical protein | phrog_9409 | unknown function | unknown function | 1 | 6757 | 7176 |
| ABW23107.1 | EU056923_p28 | hypothetical protein | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 18245 | 18391 |
| ABW23116.1 | EU056923_p37 | tubular protein A | phrog_446 | tail protein | tail | 1 | 25649 | 26203 |
| ABW23085.1 | EU056923_p6 | hypothetical protein | phrog_8496 | unknown function | unknown function | 1 | 3926 | 4105 |
| ABW23129.1 | EU056923_p50 | hypothetical protein | phrog_214 | Rz-like spanin | lysis | 1 | 41422 | 41751 |
| ABW23131.1 | EU056923_p52 | hypothetical protein | phrog_7171 | minor head protein | head and packaging | 1 | 42205 | 42399 |
| ABW23086.1 | EU056923_p7 | hypothetical protein | phrog_4342 | unknown function | unknown function | 1 | 4105 | 4398 |
| ABW23115.1 | EU056923_p36 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24545 | 25552 |
| ABW23084.1 | EU056923_p5 | hypothetical protein | phrog_7027 | unknown function | unknown function | 1 | 3520 | 3747 |
| ABW23121.1 | EU056923_p42 | tail fiber protein | phrog_6953 | tail fiber protein | tail | 1 | 35946 | 36701 |
| ABW23117.1 | EU056923_p38 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 26206 | 28686 |
| ABW23080.1 | EU056923_p1 | hypothetical protein | phrog_5722 | unknown function | unknown function | 1 | 1730 | 2020 |
| ABW23106.1 | EU056923_p27 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 17880 | 18248 |
| ABW23087.1 | EU056923_p8 | hypothetical protein | phrog_4955 | unknown function | unknown function | 1 | 4395 | 4631 |
| ABW23096.1 | EU056923_p17 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 8543 | 9736 |
| ABW23090.1 | EU056923_p11 | hypothetical protein | phrog_6915 | unknown function | unknown function | 1 | 5506 | 5865 |
| ABW23093.1 | EU056923_p14 | hypothetical protein | phrog_2563 | unknown function | unknown function | 1 | 6947 | 7489 |
| ABW23128.1 | EU056923_p49 | phage lysozyme | phrog_7 | endolysin | lysis | 1 | 40982 | 41464 |
| ABW23102.1 | EU056923_p23 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 14407 | 15456 |
| ABW23130.1 | EU056923_p51 | minor structural protein | phrog_6908 | minor head protein | head and packaging | 1 | 41841 | 42155 |
| ABW23127.1 | EU056923_p48 | hypothetical protein | phrog_6597 | holin | lysis | 1 | 40785 | 40985 |
| ABW23101.1 | EU056923_p22 | hypothetical protein | phrog_5437 | unknown function | unknown function | 1 | 14039 | 14350 |
| ABW23099.1 | EU056923_p20 | hypothetical protein | phrog_7292 | unknown function | unknown function | 1 | 11287 | 11622 |
| ABW23110.1 | EU056923_p31 | hypothetical protein | phrog_3986 | unknown function | unknown function | 1 | 21262 | 21735 |
| ABW23103.1 | EU056923_p24 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15456 | 16397 |
| ABW23109.1 | EU056923_p30 | hypothetical protein | phrog_6575 | unknown function | unknown function | 1 | 21011 | 21262 |