Genomic map of Lactococcus phage asccphi28 (EU438902)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
EU438902
Definition
Lactococcus phage asccphi28, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
18762
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
28
%GC
33.65
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ACA21482.1 EU438902_p8 unknown phrog_34581 unknown function unknown function 1 4429 4869
ACA21486.1 EU438902_p12 lysin phrog_37633 endolysin lysis 1 6563 7690
ACA21481.1 EU438902_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2264 4432
ACA21500.1 EU438902_p26 unknown phrog_36210 unknown function unknown function -1 16918 17082
ACA21498.1 EU438902_p23 major capsid protein phrog_33048 major head protein head and packaging -1 15110 16570
ACA21489.1 EU438902_p15 unknown phrog_27979 unknown function unknown function -1 9820 10527
ACA21483.1 EU438902_p9 unknown phrog_35781 unknown function unknown function 1 4871 5041
ACA21501.1 EU438902_p27 ssDNA-binding phrog_6243 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 17191 17682
ACA21492.1 EU438902_p18 unknown phrog_17155 unknown function unknown function -1 12128 13081
ACA21496.1 EU438902_p22 unknown phrog_35903 unknown function unknown function -1 14856 15056
ACA21484.1 EU438902_p10 holin phrog_38456 holin lysis 1 5081 5467
ACA21495.1 EU438902_p21 upper collar phrog_2038 upper collar connector connector -1 14086 14856
ACA21475.1 EU438902_p1 unknown phrog_36694 unknown function unknown function 1 614 871
ACA21502.1 EU438902_p28 unknown phrog_35920 unknown function unknown function -1 17896 18168
ACA21494.1 EU438902_p19 unknown phrog_3393 endolysin lysis -1 13093 14085
ACA21478.1 EU438902_p4 unknown phrog_34616 unknown function unknown function 1 1283 1564
ACA21476.1 EU438902_p2 unknown phrog_29670 unknown function unknown function 1 861 1061
ACA21491.1 EU438902_p17 unknown phrog_15030 unknown function unknown function -1 11297 12118
ACA21490.1 EU438902_p16 unknown phrog_35466 unknown function unknown function -1 10524 11282
ACA21480.1 EU438902_p6 terminal protein phrog_35532 unknown function unknown function 1 1736 2239
ACA21485.1 EU438902_p11 encapsidation protein phrog_31603 terminase head and packaging 1 5451 6551
ACA21487.1 EU438902_p13 tail protein phrog_35749 tail protein tail -1 7730 8203
ACA21497.1 EU438902_p24 unknown phrog_28457 unknown function unknown function -1 15244 15594
ACA21499.1 EU438902_p25 unknown phrog_37468 unknown function unknown function -1 16573 16914
ACA21488.1 EU438902_p14 tail protein phrog_32033 tail protein tail -1 8089 9777
ACA21477.1 EU438902_p3 unknown phrog_30289 unknown function unknown function 1 1069 1281
ACA21479.1 EU438902_p5 unknown phrog_27956 unknown function unknown function 1 1596 1742
ACA21493.1 EU438902_p20 unknown phrog_35026 unknown function unknown function -1 13176 13322