Genomic map of Clostridium virus phiCD27 (EU719189)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
EU719189
Definition
Clostridium phage phiCD27, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus.
DB of origin
NUCCORE
Length
50930
Host Name
Clostridium difficile
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
29.32
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ACH91322.1 EU719189_p31 hypothetical protein phrog_134 unknown function unknown function 1 26703 26840
ACH91341.1 EU719189_p50 hypothetical protein phrog_17130 unknown function unknown function 1 37861 38049
ACH91339.1 EU719189_p48 hypothetical protein phrog_38821 unknown function unknown function 1 36825 36995
ACH91306.1 EU719189_p15 hypothetical protein phrog_389 tail protein XkdN-like tail 1 11598 12071
ACH91358.1 EU719189_p67 hypothetical protein phrog_3794 unknown function unknown function 1 45258 45371
ACH91293.1 EU719189_p2 terminase B phrog_2 terminase large subunit head and packaging 1 748 2157
ACH91315.1 EU719189_p24 hypothetical protein phrog_1780 tail collar fiber protein tail 1 21888 22268
ACH91309.1 EU719189_p18 peptidoglycan-binding LysM phrog_380 endolysin lysis 1 17557 18228
ACH91319.1 EU719189_p28 hypothetical protein phrog_1243 unknown function unknown function 1 24957 25139
ACH91307.1 EU719189_p16 phage tail tape measure protein phrog_1272 tail length tape measure protein tail 1 12252 16541
ACH91340.1 EU719189_p49 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 37012 37800
ACH91331.1 EU719189_p40 hypothetical protein phrog_2569 unknown function unknown function -1 32167 32355
ACH91295.1 EU719189_p4 head morphogenesis protein phrog_1657 head morphogenesis head and packaging 1 3643 4650
ACH91296.1 EU719189_p5 hypothetical protein phrog_3219 unknown function unknown function 1 4670 6004
ACH91350.1 EU719189_p59 hypothetical protein phrog_1310 unknown function unknown function 1 42103 42468
ACH91329.1 EU719189_p38 hypothetical protein phrog_87 metallo-protease other -1 30944 31465
ACH91365.1 EU719189_p74 hypothetical protein phrog_26154 unknown function unknown function 1 50065 50190
ACH91303.1 EU719189_p12 hypothetical protein phrog_1939 unknown function unknown function 1 9458 9661
ACH91366.1 EU719189_p75 hypothetical protein phrog_463 anti-repressor transcription regulation 1 50244 50921
ACH91333.1 EU719189_p42 phage site-specific recombinase phrog_95 integrase integration and excision -1 33360 34718
ACH91356.1 EU719189_p65 hypothetical protein phrog_5599 unknown function unknown function 1 44644 44826
ACH91336.1 EU719189_p45 phage repressor phrog_3 transcriptional repressor transcription regulation 1 35883 36104
ACH91312.1 EU719189_p21 hypothetical protein phrog_120 baseplate wedge subunit tail 1 19520 19978
ACH91318.1 EU719189_p27 hypothetical protein phrog_1626 rhodanese-related sulfurtransferase other 1 24661 24957
ACH91363.1 EU719189_p72 phage DNA-binding protein phrog_2439 transcriptional regulator transcription regulation 1 48448 49611
ACH91330.1 EU719189_p39 hypothetical protein phrog_17489 unknown function unknown function 1 31939 32091
ACH91320.1 EU719189_p29 hypothetical protein phrog_4184 unknown function unknown function 1 25174 26406
ACH91347.1 EU719189_p56 resolvase/integrase phrog_3253 unknown function unknown function 1 40902 41075
ACH91355.1 EU719189_p64 hypothetical protein phrog_4572 unknown function unknown function 1 44270 44641
ACH91316.1 EU719189_p25 tail fiber protein phrog_1162 tail fiber protein tail 1 22280 22897
ACH91345.1 EU719189_p54 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39274 39882
ACH91321.1 EU719189_p30 hypothetical protein phrog_3834 unknown function unknown function 1 26403 26702
ACH91326.1 EU719189_p35 hypothetical protein phrog_5384 unknown function unknown function 1 28272 28634
ACH91338.1 EU719189_p47 hypothetical protein phrog_4738 transcriptional repressor transcription regulation -1 36496 36669
ACH91362.1 EU719189_p71 hypothetical protein phrog_26280 unknown function unknown function 1 47674 48429
ACH91299.1 EU719189_p8 hypothetical protein phrog_3029 unknown function unknown function 1 7499 7837
ACH91294.1 EU719189_p3 portal protein phrog_64 portal protein head and packaging 1 2148 3650
ACH91313.1 EU719189_p22 hypothetical protein phrog_6 baseplate wedge subunit tail 1 19987 21120
ACH91297.1 EU719189_p6 hypothetical protein phrog_122 head decoration head and packaging 1 6020 6403
ACH91314.1 EU719189_p23 hypothetical protein phrog_1160 baseplate protein tail 1 21117 21887
ACH91324.1 EU719189_p33 holin phrog_1129 holin lysis 1 27122 27379
ACH91323.1 EU719189_p32 hypothetical protein phrog_1193 hemolysin other 1 26872 27102
ACH91334.1 EU719189_p43 hypothetical protein phrog_87 metallo-protease other -1 34783 35256
ACH91332.1 EU719189_p41 hypothetical protein phrog_738 unknown function unknown function 1 32612 32755
ACH91337.1 EU719189_p46 phage antirepressor phrog_7755 anti-repressor transcription regulation 1 36152 36364
ACH91298.1 EU719189_p7 hypothetical protein phrog_3116 unknown function unknown function 1 6422 7459
ACH91346.1 EU719189_p55 phage replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 39891 40841
ACH91351.1 EU719189_p60 hypothetical protein phrog_2961 unknown function unknown function 1 42468 42602
ACH91360.1 EU719189_p69 antirepressor phrog_463 anti-repressor transcription regulation 1 45877 46725
ACH91305.1 EU719189_p14 hypothetical protein phrog_365 tail protein tail 1 11099 11521
ACH91310.1 EU719189_p19 hypothetical protein phrog_400 tail protein tail 1 18225 19187
ACH91308.1 EU719189_p17 hypothetical protein phrog_3793 unknown function unknown function 1 16621 17478
ACH91361.1 EU719189_p70 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 46878 47360
ACH91353.1 EU719189_p62 DNA methylase phrog_363 DNA methyltransferase other 1 43029 43859
ACH91335.1 EU719189_p44 phage repressor phrog_8 transcriptional regulator transcription regulation -1 35274 35729
ACH91301.1 EU719189_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 8177 8623
ACH91352.1 EU719189_p61 hypothetical protein phrog_8001 unknown function unknown function 1 42586 42921
ACH91300.1 EU719189_p9 hypothetical protein phrog_2405 unknown function unknown function 1 7834 8211
ACH91354.1 EU719189_p63 hypothetical protein phrog_6014 unknown function unknown function 1 43904 44233
ACH91327.1 EU719189_p36 hypothetical protein phrog_5951 unknown function unknown function 1 28800 29318
ACH91325.1 EU719189_p34 endolysin phrog_435 endolysin lysis 1 27379 28191
ACH91348.1 EU719189_p57 single stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 41091 41498
ACH91343.1 EU719189_p52 hypothetical protein phrog_2219 unknown function unknown function 1 38352 38669
ACH91359.1 EU719189_p68 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 45368 45775
ACH91328.1 EU719189_p37 hypothetical protein phrog_6174 unknown function unknown function -1 29382 30968
ACH91349.1 EU719189_p58 hypothetical protein phrog_7118 unknown function unknown function 1 41526 42089
ACH91364.1 EU719189_p73 hypothetical protein phrog_17098 unknown function unknown function 1 49680 49811
ACH91344.1 EU719189_p53 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 38755 39264
ACH91342.1 EU719189_p51 hypothetical protein phrog_1564 unknown function unknown function 1 38079 38252
ACH91311.1 EU719189_p20 hypothetical protein phrog_2403 unknown function unknown function 1 19180 19542
ACH91317.1 EU719189_p26 hypothetical protein phrog_1589 unknown function unknown function 1 22914 24647
ACH91292.1 EU719189_p1 terminase small subunit phrog_509 terminase small subunit head and packaging 1 54 755
ACH91357.1 EU719189_p66 hypothetical protein phrog_4279 unknown function unknown function 1 44901 45242
ACH91304.1 EU719189_p13 hypothetical protein phrog_279 tail sheath tail 1 9663 11084
ACH91302.1 EU719189_p11 hypothetical protein phrog_2146 unknown function unknown function 1 8624 9445