Genomic map of Lactococcus virus CB19 (FJ848884)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
FJ848884
Definition
Lactococcus phage CB19, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
DB of origin
PVOG
Length
28643
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
35.14
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ACU46951.1 FJ848884_p31 unknown phrog_1508 unknown function unknown function -1 20676 20795
ACU46953.1 FJ848884_p33 unknown phrog_4546 unknown function unknown function -1 21096 21206
ACU46959.1 FJ848884_p39 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22926 23549
ACU46948.1 FJ848884_p28 unknown phrog_2530 unknown function unknown function -1 19805 19996
ACU46950.1 FJ848884_p30 unknown phrog_1225 unknown function unknown function -1 20368 20676
ACU46964.1 FJ848884_p44 DNA polymerase subunit phrog_1284 unknown function unknown function -1 24846 25742
ACU46922.1 FJ848884_p2 unknown phrog_4501 unknown function unknown function 1 787 1017
ACU46923.1 FJ848884_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1029 2651
ACU46930.1 FJ848884_p10 unknown phrog_1484 virion structural protein head and packaging 1 6353 6691
ACU46971.1 FJ848884_p51 unknown phrog_6252 unknown function unknown function 1 28416 28556
ACU46935.1 FJ848884_p15 unknown phrog_1421 virion structural protein head and packaging 1 10336 10848
ACU46949.1 FJ848884_p29 unknown phrog_1509 unknown function unknown function -1 20038 20295
ACU46925.1 FJ848884_p5 portal protein phrog_12 portal protein head and packaging 1 2938 4074
ACU46969.1 FJ848884_p49 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27348 27827
ACU46928.1 FJ848884_p8 unknown phrog_1428 head-tail connector protein connector 1 5786 6049
ACU46945.1 FJ848884_p25 unknown phrog_1415 unknown function unknown function -1 19113 19460
ACU46942.1 FJ848884_p22 endolysin phrog_670 endolysin lysis 1 17315 18019
ACU46936.1 FJ848884_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 10848 13838
ACU46929.1 FJ848884_p9 unknown phrog_1429 virion structural protein head and packaging 1 6049 6363
ACU46965.1 FJ848884_p45 unknown phrog_9199 unknown function unknown function -1 25786 25947
ACU46962.1 FJ848884_p42 unknown phrog_1632 unknown function unknown function -1 24256 24543
ACU46941.1 FJ848884_p21 holin phrog_1379 unknown function unknown function 1 16965 17318
ACU46934.1 FJ848884_p14 unknown phrog_1420 virion structural protein head and packaging 1 10041 10316
ACU46961.1 FJ848884_p41 unknown phrog_1449 unknown function unknown function -1 24033 24299
ACU46940.1 FJ848884_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16134 16943
ACU46926.1 FJ848884_p6 prohead protease phrog_80 head maturation protease head and packaging 1 4055 4591
ACU46970.1 FJ848884_p50 unknown phrog_1652 unknown function unknown function 1 27828 27995
ACU46933.1 FJ848884_p13 major capsid protein phrog_1433 major tail protein tail 1 9098 10003
ACU46968.1 FJ848884_p48 unknown phrog_1436 unknown function unknown function 1 27220 27351
ACU46957.1 FJ848884_p37 unknown phrog_1295 unknown function unknown function -1 22335 22547
ACU46931.1 FJ848884_p11 unknown phrog_1440 virion structural protein head and packaging 1 6682 7047
ACU46946.1 FJ848884_p26 unknown phrog_1441 unknown function unknown function -1 19460 19627
ACU46954.1 FJ848884_p34 unknown phrog_1919 unknown function unknown function -1 21241 21555
ACU46947.1 FJ848884_p27 unknown phrog_1820 unknown function unknown function -1 19627 19803
ACU46937.1 FJ848884_p17 unknown phrog_1424 tail protein tail 1 13838 14734
ACU46960.1 FJ848884_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23546 24046
ACU46967.1 FJ848884_p47 unknown phrog_5027 unknown function unknown function 1 26988 27215
ACU46955.1 FJ848884_p35 unknown phrog_11716 unknown function unknown function -1 21555 21746
ACU46956.1 FJ848884_p36 unknown phrog_1317 unknown function unknown function -1 21826 22338
ACU46944.1 FJ848884_p24 unknown phrog_1430 unknown function unknown function -1 18674 18940
ACU46939.1 FJ848884_p19 unknown phrog_1434 unknown function unknown function 1 15851 16144
ACU46932.1 FJ848884_p12 neck passage structure protein phrog_2370 neck passage structure connector 1 7104 9074
ACU46927.1 FJ848884_p7 minor structural protein phrog_1393 minor head protein head and packaging 1 4584 5765
ACU46943.1 FJ848884_p23 unknown phrog_3775 transglycosylase other -1 18464 18613
ACU46938.1 FJ848884_p18 unknown phrog_1432 tail associated lysin tail 1 14734 15861
ACU46921.1 FJ848884_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 266 790
ACU46958.1 FJ848884_p38 unknown phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22563 22922
ACU46952.1 FJ848884_p32 unknown phrog_1825 DNA methyltransferase other -1 20853 21095
ACU46924.1 FJ848884_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2641 2925
ACU46966.1 FJ848884_p46 unknown phrog_1656 unknown function unknown function -1 26769 26957
ACU46963.1 FJ848884_p43 unknown phrog_1405 unknown function unknown function -1 24596 24853