Genomic map of Streptococcus phage phi-SsUD.1 (FN997652)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
FN997652
Definition
Streptococcus phage phi-SsUD.1 complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
63748
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
39.71
Number of singletons
12
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CBR26910.1 FN997652_p41 hypothetical protein phrog_25 head closure Hc1 connector 1 38296 38634
CBR26919.1 FN997652_p50 hypothetical protein phrog_1164 unknown function unknown function 1 48795 49163
CBR26920.1 FN997652_p51 hypothetical protein phrog_199 holin lysis 1 49141 49536
CBR26935.1 FN997652_p66 UDP-galactopyranose mutase phrog_9677 unknown function unknown function 1 62636 63748
CBR26904.1 FN997652_p35 hypothetical protein phrog_9 terminase large subunit head and packaging 1 32412 34004
CBR26900.1 FN997652_p31 hypothetical protein phrog_6231 unknown function unknown function 1 31163 31444
CBR26887.1 FN997652_p18 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 18532 19104
CBR26911.1 FN997652_p42 hypothetical protein singleton unknown function unknown function 1 38708 38869
CBR26895.1 FN997652_p26 hypothetical protein singleton unknown function unknown function 1 27097 27468
CBR26913.1 FN997652_p44 hypothetical protein phrog_88 major tail protein tail 1 39317 39898
CBR26889.1 FN997652_p20 hypothetical protein phrog_408 unknown function unknown function -1 20199 20522
CBR26914.1 FN997652_p45 hypothetical protein phrog_709 unknown function unknown function 1 39910 40329
CBR26930.1 FN997652_p61 aminoglycoside phosphotransferase type III phrog_15084 unknown function unknown function -1 58192 58986
CBR26922.1 FN997652_p53 hypothetical protein phrog_95 integrase integration and excision 1 51239 52480
CBR26931.1 FN997652_p62 streptothricin acetyltransferase phrog_20341 acetyltransferase other -1 59079 59609
CBR26927.1 FN997652_p58 hypothetical protein singleton unknown function unknown function -1 56389 56889
CBR26872.1 FN997652_p3 cadmium efflux system accessory protein singleton unknown function unknown function 1 2357 2725
CBR26932.1 FN997652_p63 aminoglycoside 6-adenylyltranserase phrog_18605 unknown function unknown function -1 59618 60526
CBR26933.1 FN997652_p64 hypothetical protein singleton unknown function unknown function -1 60695 60886
CBR26899.1 FN997652_p30 hypothetical protein phrog_116 DNA methyltransferase other 1 29843 31102
CBR26924.1 FN997652_p55 hypothetical protein singleton unknown function unknown function 1 53805 55553
CBR26870.1 FN997652_p1 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase phrog_11787 DNA methyltransferase other 1 1 1356
CBR26882.1 FN997652_p13 hypothetical protein singleton unknown function unknown function 1 11981 12379
CBR26892.1 FN997652_p23 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 25116 25592
CBR26874.1 FN997652_p5 hypothetical protein phrog_16386 unknown function unknown function -1 5157 5471
CBR26883.1 FN997652_p14 hypothetical protein phrog_4031 unknown function unknown function 1 13462 15330
CBR26915.1 FN997652_p46 hypothetical protein phrog_58 tail length tape measure protein tail 1 40512 43370
CBR26917.1 FN997652_p48 hypothetical protein phrog_1330 tail protein tail 1 44368 48570
CBR26908.1 FN997652_p39 hypothetical protein phrog_94 head maturation protease head and packaging 1 36102 36812
CBR26925.1 FN997652_p56 hypothetical protein singleton unknown function unknown function 1 55565 55744
CBR26894.1 FN997652_p25 hypothetical protein phrog_1569 unknown function unknown function 1 26027 27064
CBR26907.1 FN997652_p38 hypothetical protein phrog_12 portal protein head and packaging 1 34841 36124
CBR26926.1 FN997652_p57 hypothetical protein singleton unknown function unknown function -1 56195 56416
CBR26912.1 FN997652_p43 hypothetical protein phrog_78 tail terminator connector 1 39001 39327
CBR26905.1 FN997652_p36 hypothetical protein phrog_2194 unknown function unknown function 1 34075 34332
CBR26901.1 FN997652_p32 hypothetical protein phrog_3782 unknown function unknown function 1 31446 31658
CBR26897.1 FN997652_p28 hypothetical protein phrog_2308 unknown function unknown function 1 28157 28618
CBR26918.1 FN997652_p49 hypothetical protein phrog_1137 unknown function unknown function 1 48583 48789
CBR26877.1 FN997652_p8 hypothetical protein phrog_27023 unknown function unknown function -1 7360 7587
CBR26896.1 FN997652_p27 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27493 27858
CBR26891.1 FN997652_p22 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 23747 25123
CBR26893.1 FN997652_p24 hypothetical protein phrog_2555 unknown function unknown function 1 25765 25980
CBR26903.1 FN997652_p34 hypothetical protein phrog_83 terminase small subunit head and packaging 1 31978 32415
CBR26871.1 FN997652_p2 hypothetical protein singleton unknown function unknown function -1 1987 2154
CBR26881.1 FN997652_p12 tetracycline resistance protein phrog_6880 translation elongation factor other 1 9645 11564
CBR26878.1 FN997652_p9 hypothetical protein phrog_6201 CI-like repressor transcription regulation -1 7590 8033
CBR26906.1 FN997652_p37 hypothetical protein phrog_577 Doc-like toxin moron, auxiliary metabolic gene and host takeover 1 34329 34700
CBR26923.1 FN997652_p54 hypothetical protein phrog_95 integrase integration and excision 1 52347 53735
CBR26873.1 FN997652_p4 cation trasporter E1-E2 family ATPase phrog_12316 ATPase other 1 2718 4847
CBR26888.1 FN997652_p19 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 19085 20206
CBR26898.1 FN997652_p29 hypothetical protein phrog_498 DNA methyltransferase other 1 28518 29846
CBR26876.1 FN997652_p7 hypothetical protein phrog_1268 DNA polymerase DNA, RNA and nucleotide metabolism -1 5823 7238
CBR26929.1 FN997652_p60 hypothetical protein singleton unknown function unknown function -1 57344 57709
CBR26875.1 FN997652_p6 hypothetical protein phrog_16307 unknown function unknown function -1 5458 5826
CBR26879.1 FN997652_p10 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 8045 8287
CBR26885.1 FN997652_p16 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 16342 18297
CBR26916.1 FN997652_p47 hypothetical protein phrog_33 distal tail protein Dit tail 1 43367 44089
CBR26890.1 FN997652_p21 hypothetical protein phrog_1883 DNA helicase DNA, RNA and nucleotide metabolism 1 20912 23197
CBR26884.1 FN997652_p15 hypothetical protein phrog_2513 unknown function unknown function 1 15737 16306
CBR26928.1 FN997652_p59 hypothetical protein phrog_20885 unknown function unknown function -1 56964 57239
CBR26902.1 FN997652_p33 hypothetical protein phrog_4709 unknown function unknown function 1 31660 31890
CBR26909.1 FN997652_p40 hypothetical protein phrog_10 major head protein head and packaging 1 36831 38036
CBR26921.1 FN997652_p52 hypothetical protein phrog_2742 endolysin lysis 1 49543 51012
CBR26934.1 FN997652_p65 MLS methylase singleton unknown function unknown function -1 60831 61568
CBR26880.1 FN997652_p11 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 8387 8638
CBR26886.1 FN997652_p17 hypothetical protein phrog_2442 unknown function unknown function -1 18346 18513