functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
FN997652 |
Definition |
Streptococcus phage phi-SsUD.1 complete sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
63748 |
Host Name |
Streptococcus suis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
66 |
%GC |
39.71 |
Number of singletons |
12 |
Number of paralogs |
2 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
CBR26910.1 | FN997652_p41 | hypothetical protein | phrog_25 | head closure Hc1 | connector | 1 | 38296 | 38634 |
CBR26919.1 | FN997652_p50 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 48795 | 49163 |
CBR26920.1 | FN997652_p51 | hypothetical protein | phrog_199 | holin | lysis | 1 | 49141 | 49536 |
CBR26935.1 | FN997652_p66 | UDP-galactopyranose mutase | phrog_9677 | unknown function | unknown function | 1 | 62636 | 63748 |
CBR26904.1 | FN997652_p35 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 32412 | 34004 |
CBR26900.1 | FN997652_p31 | hypothetical protein | phrog_6231 | unknown function | unknown function | 1 | 31163 | 31444 |
CBR26887.1 | FN997652_p18 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 18532 | 19104 |
CBR26911.1 | FN997652_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38708 | 38869 |
CBR26895.1 | FN997652_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27097 | 27468 |
CBR26913.1 | FN997652_p44 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 39317 | 39898 |
CBR26889.1 | FN997652_p20 | hypothetical protein | phrog_408 | unknown function | unknown function | -1 | 20199 | 20522 |
CBR26914.1 | FN997652_p45 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 39910 | 40329 |
CBR26930.1 | FN997652_p61 | aminoglycoside phosphotransferase type III | phrog_15084 | unknown function | unknown function | -1 | 58192 | 58986 |
CBR26922.1 | FN997652_p53 | hypothetical protein | phrog_95 | integrase | integration and excision | 1 | 51239 | 52480 |
CBR26931.1 | FN997652_p62 | streptothricin acetyltransferase | phrog_20341 | acetyltransferase | other | -1 | 59079 | 59609 |
CBR26927.1 | FN997652_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56389 | 56889 |
CBR26872.1 | FN997652_p3 | cadmium efflux system accessory protein | singleton | unknown function | unknown function | 1 | 2357 | 2725 |
CBR26932.1 | FN997652_p63 | aminoglycoside 6-adenylyltranserase | phrog_18605 | unknown function | unknown function | -1 | 59618 | 60526 |
CBR26933.1 | FN997652_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60695 | 60886 |
CBR26899.1 | FN997652_p30 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 29843 | 31102 |
CBR26924.1 | FN997652_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53805 | 55553 |
CBR26870.1 | FN997652_p1 | SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase | phrog_11787 | DNA methyltransferase | other | 1 | 1 | 1356 |
CBR26882.1 | FN997652_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11981 | 12379 |
CBR26892.1 | FN997652_p23 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 25116 | 25592 |
CBR26874.1 | FN997652_p5 | hypothetical protein | phrog_16386 | unknown function | unknown function | -1 | 5157 | 5471 |
CBR26883.1 | FN997652_p14 | hypothetical protein | phrog_4031 | unknown function | unknown function | 1 | 13462 | 15330 |
CBR26915.1 | FN997652_p46 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | 1 | 40512 | 43370 |
CBR26917.1 | FN997652_p48 | hypothetical protein | phrog_1330 | tail protein | tail | 1 | 44368 | 48570 |
CBR26908.1 | FN997652_p39 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 36102 | 36812 |
CBR26925.1 | FN997652_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55565 | 55744 |
CBR26894.1 | FN997652_p25 | hypothetical protein | phrog_1569 | unknown function | unknown function | 1 | 26027 | 27064 |
CBR26907.1 | FN997652_p38 | hypothetical protein | phrog_12 | portal protein | head and packaging | 1 | 34841 | 36124 |
CBR26926.1 | FN997652_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56195 | 56416 |
CBR26912.1 | FN997652_p43 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 39001 | 39327 |
CBR26905.1 | FN997652_p36 | hypothetical protein | phrog_2194 | unknown function | unknown function | 1 | 34075 | 34332 |
CBR26901.1 | FN997652_p32 | hypothetical protein | phrog_3782 | unknown function | unknown function | 1 | 31446 | 31658 |
CBR26897.1 | FN997652_p28 | hypothetical protein | phrog_2308 | unknown function | unknown function | 1 | 28157 | 28618 |
CBR26918.1 | FN997652_p49 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 48583 | 48789 |
CBR26877.1 | FN997652_p8 | hypothetical protein | phrog_27023 | unknown function | unknown function | -1 | 7360 | 7587 |
CBR26896.1 | FN997652_p27 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27493 | 27858 |
CBR26891.1 | FN997652_p22 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 23747 | 25123 |
CBR26893.1 | FN997652_p24 | hypothetical protein | phrog_2555 | unknown function | unknown function | 1 | 25765 | 25980 |
CBR26903.1 | FN997652_p34 | hypothetical protein | phrog_83 | terminase small subunit | head and packaging | 1 | 31978 | 32415 |
CBR26871.1 | FN997652_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1987 | 2154 |
CBR26881.1 | FN997652_p12 | tetracycline resistance protein | phrog_6880 | translation elongation factor | other | 1 | 9645 | 11564 |
CBR26878.1 | FN997652_p9 | hypothetical protein | phrog_6201 | CI-like repressor | transcription regulation | -1 | 7590 | 8033 |
CBR26906.1 | FN997652_p37 | hypothetical protein | phrog_577 | Doc-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 34329 | 34700 |
CBR26923.1 | FN997652_p54 | hypothetical protein | phrog_95 | integrase | integration and excision | 1 | 52347 | 53735 |
CBR26873.1 | FN997652_p4 | cation trasporter E1-E2 family ATPase | phrog_12316 | ATPase | other | 1 | 2718 | 4847 |
CBR26888.1 | FN997652_p19 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 19085 | 20206 |
CBR26898.1 | FN997652_p29 | hypothetical protein | phrog_498 | DNA methyltransferase | other | 1 | 28518 | 29846 |
CBR26876.1 | FN997652_p7 | hypothetical protein | phrog_1268 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 5823 | 7238 |
CBR26929.1 | FN997652_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57344 | 57709 |
CBR26875.1 | FN997652_p6 | hypothetical protein | phrog_16307 | unknown function | unknown function | -1 | 5458 | 5826 |
CBR26879.1 | FN997652_p10 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 8045 | 8287 |
CBR26885.1 | FN997652_p16 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 16342 | 18297 |
CBR26916.1 | FN997652_p47 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 43367 | 44089 |
CBR26890.1 | FN997652_p21 | hypothetical protein | phrog_1883 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 20912 | 23197 |
CBR26884.1 | FN997652_p15 | hypothetical protein | phrog_2513 | unknown function | unknown function | 1 | 15737 | 16306 |
CBR26928.1 | FN997652_p59 | hypothetical protein | phrog_20885 | unknown function | unknown function | -1 | 56964 | 57239 |
CBR26902.1 | FN997652_p33 | hypothetical protein | phrog_4709 | unknown function | unknown function | 1 | 31660 | 31890 |
CBR26909.1 | FN997652_p40 | hypothetical protein | phrog_10 | major head protein | head and packaging | 1 | 36831 | 38036 |
CBR26921.1 | FN997652_p52 | hypothetical protein | phrog_2742 | endolysin | lysis | 1 | 49543 | 51012 |
CBR26934.1 | FN997652_p65 | MLS methylase | singleton | unknown function | unknown function | -1 | 60831 | 61568 |
CBR26880.1 | FN997652_p11 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 8387 | 8638 |
CBR26886.1 | FN997652_p17 | hypothetical protein | phrog_2442 | unknown function | unknown function | -1 | 18346 | 18513 |