| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
GQ979703 |
Definition |
Lactococcus lactis phage p2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus. |
DB of origin |
PVOG |
Length |
27595 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
34.72 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ADC80106.1 | GQ979703_p42 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 22745 | 22927 |
| ADC80095.1 | GQ979703_p21 | hypothetical protein | phrog_3775 | transglycosylase | other | -1 | 15950 | 16141 |
| ADC80087.1 | GQ979703_p12 | chaperone | phrog_1420 | virion structural protein | head and packaging | 1 | 7786 | 8061 |
| ADC80079.1 | GQ979703_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2411 | 2695 |
| ADC80100.1 | GQ979703_p32 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 19256 | 19765 |
| ADC80078.1 | GQ979703_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 799 | 2421 |
| ADC80077.1 | GQ979703_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 274 | 798 |
| ADC80113.1 | GQ979703_p49 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 26370 | 26537 |
| ADC80112.1 | GQ979703_p48 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 25891 | 26373 |
| AAT81478.1 | GQ979703_p18 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 13888 | 14682 |
| ADC80107.1 | GQ979703_p43 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 22920 | 23870 |
| ADC80088.1 | GQ979703_p13 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 8081 | 8593 |
| ADC80094.1 | GQ979703_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15054 | 15815 |
| ADC80080.1 | GQ979703_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2708 | 3844 |
| ADC80108.1 | GQ979703_p44 | hypothetical protein | phrog_7915 | unknown function | unknown function | -1 | 23889 | 24569 |
| ADC80090.1 | GQ979703_p15 | baseplate protein | phrog_1424 | tail protein | tail | 1 | 11592 | 12488 |
| ADC80099.1 | GQ979703_p25 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 17175 | 17432 |
| ADC80105.1 | GQ979703_p41 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 22516 | 22782 |
| ADC80104.1 | GQ979703_p40 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 22073 | 22459 |
| AAR14301.2 | GQ979703_p34 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 19993 | 20352 |
| ADC80098.1 | GQ979703_p24 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 16988 | 17224 |
| ADC80082.1 | GQ979703_p6 | capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4354 | 5535 |
| ADC80102.1 | GQ979703_p38 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 21572 | 21973 |
| ADC80109.1 | GQ979703_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25000 | 25491 |
| ACI94897.1 | GQ979703_p28 | hypothetical protein | phrog_3002 | unknown function | unknown function | -1 | 17998 | 18183 |
| ADC80085.1 | GQ979703_p9 | structural protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6123 | 6461 |
| ADC80083.1 | GQ979703_p7 | structural protein | phrog_1428 | head-tail connector protein | connector | 1 | 5556 | 5819 |
| AAR14300.1 | GQ979703_p35 | Sak3 | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 20356 | 20979 |
| ADC80092.1 | GQ979703_p17 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 13605 | 13898 |
| ADC80081.1 | GQ979703_p5 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3825 | 4361 |
| ADC80110.1 | GQ979703_p46 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 25630 | 25758 |
| ACI94894.2 | GQ979703_p31 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 18856 | 19173 |
| ADC80111.1 | GQ979703_p47 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 25763 | 25894 |
| ACI94899.1 | GQ979703_p26 | SaV | phrog_1225 | unknown function | unknown function | -1 | 17496 | 17882 |
| ADC80084.1 | GQ979703_p8 | structural protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5819 | 6133 |
| ADC80103.1 | GQ979703_p39 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 21789 | 22076 |
| AAF85633.1 | GQ979703_p11 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 6830 | 7735 |
| ADC80101.1 | GQ979703_p33 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 19762 | 19977 |
| ADC80097.1 | GQ979703_p23 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 16641 | 16988 |
| ADC80093.1 | GQ979703_p19 | holin | phrog_1379 | unknown function | unknown function | 1 | 14704 | 15057 |
| ADC80089.1 | GQ979703_p14 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8593 | 11592 |
| ADC80091.1 | GQ979703_p16 | baseplate protein | phrog_1432 | tail associated lysin | tail | 1 | 12488 | 13615 |
| ACI94895.1 | GQ979703_p30 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 18573 | 18818 |
| AAR14298.1 | GQ979703_p37 | hypothetical protein | phrog_6484 | unknown function | unknown function | -1 | 21345 | 21575 |
| ADC80096.1 | GQ979703_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 16202 | 16468 |
| AAR14299.2 | GQ979703_p36 | hypothetical protein | phrog_5462 | unknown function | unknown function | -1 | 20976 | 21287 |
| ACI94898.1 | GQ979703_p27 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 17882 | 18001 |
| ACI94896.1 | GQ979703_p29 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 18194 | 18517 |
| ADC80086.1 | GQ979703_p10 | structural protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6452 | 6817 |