Genomic map of Escherichia phage K1ind1 (GU196279)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
GU196279
Definition
Escherichia phage K1ind1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; Escherichia virus K1ind1.
DB of origin
PVOG
Length
42292
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
51.27
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADA82360.1 GU196279_p15 tail protein phrog_17193 tail completion or Neck1 protein connector 1 9018 9374
ADA82360.1 GU196279_p15 tail protein phrog_17193 tail completion or Neck1 protein connector 1 9374 9769
ADA82354.1 GU196279_p10 hypothetical protein phrog_1954 virion structural protein head and packaging 1 7052 7306
ADA82357.1 GU196279_p13 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7889 8401
ADA82359.1 GU196279_p16 hypothetical protein phrog_161 head closure Hc1 connector 1 9018 9377
ADA82384.1 GU196279_p40 hypothetical protein phrog_5169 unknown function unknown function -1 34509 34742
ADA82373.1 GU196279_p29 tail protein phrog_469 tail protein tail 1 19263 21818
ADA82364.1 GU196279_p20 kinase-phosphatase phrog_415 polynucleotide kinase other -1 11934 12419
ADA82394.1 GU196279_p50 hypothetical protein phrog_5407 unknown function unknown function 1 40862 41143
ADA82392.1 GU196279_p48 hypothetical protein phrog_9023 unknown function unknown function 1 40124 40372
ADA82349.1 GU196279_p5 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 3858 4319
ADA82370.1 GU196279_p26 hypothetical protein phrog_11600 unknown function unknown function 1 16991 18391
ADA82355.1 GU196279_p11 hypothetical protein phrog_4069 Hoc-like head decoration head and packaging 1 7319 7669
ADA82389.1 GU196279_p45 holin-like, class I phrog_2508 holin lysis 1 38503 38775
ADA82361.1 GU196279_p17 hypothetical protein phrog_179 tail terminator connector 1 9769 10182
ADA82382.1 GU196279_p38 hypothetical protein phrog_3127 unknown function unknown function -1 31315 31833
ADA82365.1 GU196279_p21 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 12416 13546
ADA82388.1 GU196279_p44 holin-like, class II phrog_2359 holin lysis 1 38202 38510
ADA82390.1 GU196279_p46 endolysin phrog_7 endolysin lysis 1 38753 39238
ADA82371.1 GU196279_p27 hypothetical protein phrog_396 minor tail protein tail 1 18395 18910
ADA82367.1 GU196279_p24 hypothetical protein phrog_313 Tail assembly chaperone tail 1 13944 14360
ADA82352.1 GU196279_p8 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 5185 5940
ADA82379.1 GU196279_p35 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 29573 30658
ADA82374.1 GU196279_p30 tailspike 63D sialidase phrog_20900 tail spike protein tail 1 21831 23996
ADA82372.1 GU196279_p28 hypothetical protein phrog_329 minor tail protein tail 1 18907 19272
ADA82381.1 GU196279_p37 hypothetical protein phrog_4965 unknown function unknown function -1 30999 31271
ADA82350.1 GU196279_p6 spanin phrog_2536 Rz-like spanin lysis 1 4661 5047
ADA82366.1 GU196279_p22 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 13585 13776
ADA82347.1 GU196279_p3 structural protein phrog_145 portal protein head and packaging 1 1264 2745
ADA82387.1 GU196279_p43 hypothetical protein phrog_9632 unknown function unknown function 1 37830 38126
ADA82396.1 GU196279_p1 hypothetical protein phrog_3064 terminase head and packaging 1 41712 42292
ADA82396.1 GU196279_p1 hypothetical protein phrog_3064 terminase head and packaging 1 1 4
ADA82348.1 GU196279_p4 head protein, SPP1family phrog_241 head morphogenesis head and packaging 1 2782 3858
ADA82377.1 GU196279_p32 C-specific methylase phrog_363 DNA methyltransferase other -1 25831 26655
ADA82395.1 GU196279_p51 hypothetical protein phrog_268 unknown function unknown function 1 41140 41376
ADA82393.1 GU196279_p49 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40546 40776
ADA82391.1 GU196279_p47 hypothetical protein phrog_1402 unknown function unknown function 1 39886 40131
ADA82351.1 GU196279_p7 spanin phrog_1267 Rz-like spanin lysis 1 4893 5156
ADA82362.1 GU196279_p18 tail protein phrog_290 minor tail protein tail 1 10185 11351
ADA82380.1 GU196279_p36 hypothetical protein phrog_20588 unknown function unknown function -1 30655 31002
ADA82363.1 GU196279_p19 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 11380 11934
ADA82368.1 GU196279_p23 hypothetical protein phrog_15027 tail assembly chaperone tail 1 13944 14357
ADA82368.1 GU196279_p23 hypothetical protein phrog_15027 tail assembly chaperone tail 1 14357 14725
ADA82376.1 GU196279_p33 Mte8-like protein phrog_1008 DNA methyltransferase other -1 25875 26567
ADA82385.1 GU196279_p41 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 34739 34909
ADA82386.1 GU196279_p42 hypothetical protein phrog_6094 unknown function unknown function 1 37118 37630
ADA82369.1 GU196279_p25 tape measure protein phrog_1538 tail length tape measure protein tail 1 14718 16991
ADA82346.1 GU196279_p2 terminase phrog_2 terminase large subunit head and packaging 1 1 1251
ADA82383.1 GU196279_p39 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 32192 34450
ADA82353.1 GU196279_p9 major capsid protein phrog_247 major head protein head and packaging 1 5943 6992
ADA82358.1 GU196279_p14 hypothetical protein phrog_3614 unknown function unknown function 1 8404 9018
ADA82375.1 GU196279_p31 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 24414 25838
ADA82378.1 GU196279_p34 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27511 29607
ADA82356.1 GU196279_p12 hypothetical protein phrog_4451 unknown function unknown function 1 7706 7885