| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
GU196279 |
Definition |
Escherichia phage K1ind1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; Escherichia virus K1ind1. |
DB of origin |
PVOG |
Length |
42292 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
51.27 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ADA82360.1 | GU196279_p15 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 9018 | 9374 |
| ADA82360.1 | GU196279_p15 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 9374 | 9769 |
| ADA82354.1 | GU196279_p10 | hypothetical protein | phrog_1954 | virion structural protein | head and packaging | 1 | 7052 | 7306 |
| ADA82357.1 | GU196279_p13 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7889 | 8401 |
| ADA82359.1 | GU196279_p16 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 9018 | 9377 |
| ADA82384.1 | GU196279_p40 | hypothetical protein | phrog_5169 | unknown function | unknown function | -1 | 34509 | 34742 |
| ADA82373.1 | GU196279_p29 | tail protein | phrog_469 | tail protein | tail | 1 | 19263 | 21818 |
| ADA82364.1 | GU196279_p20 | kinase-phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 11934 | 12419 |
| ADA82394.1 | GU196279_p50 | hypothetical protein | phrog_5407 | unknown function | unknown function | 1 | 40862 | 41143 |
| ADA82392.1 | GU196279_p48 | hypothetical protein | phrog_9023 | unknown function | unknown function | 1 | 40124 | 40372 |
| ADA82349.1 | GU196279_p5 | tail protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 3858 | 4319 |
| ADA82370.1 | GU196279_p26 | hypothetical protein | phrog_11600 | unknown function | unknown function | 1 | 16991 | 18391 |
| ADA82355.1 | GU196279_p11 | hypothetical protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 7319 | 7669 |
| ADA82389.1 | GU196279_p45 | holin-like, class I | phrog_2508 | holin | lysis | 1 | 38503 | 38775 |
| ADA82361.1 | GU196279_p17 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 9769 | 10182 |
| ADA82382.1 | GU196279_p38 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 31315 | 31833 |
| ADA82365.1 | GU196279_p21 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 12416 | 13546 |
| ADA82388.1 | GU196279_p44 | holin-like, class II | phrog_2359 | holin | lysis | 1 | 38202 | 38510 |
| ADA82390.1 | GU196279_p46 | endolysin | phrog_7 | endolysin | lysis | 1 | 38753 | 39238 |
| ADA82371.1 | GU196279_p27 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 18395 | 18910 |
| ADA82367.1 | GU196279_p24 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 13944 | 14360 |
| ADA82352.1 | GU196279_p8 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 5185 | 5940 |
| ADA82379.1 | GU196279_p35 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 29573 | 30658 |
| ADA82374.1 | GU196279_p30 | tailspike 63D sialidase | phrog_20900 | tail spike protein | tail | 1 | 21831 | 23996 |
| ADA82372.1 | GU196279_p28 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 18907 | 19272 |
| ADA82381.1 | GU196279_p37 | hypothetical protein | phrog_4965 | unknown function | unknown function | -1 | 30999 | 31271 |
| ADA82350.1 | GU196279_p6 | spanin | phrog_2536 | Rz-like spanin | lysis | 1 | 4661 | 5047 |
| ADA82366.1 | GU196279_p22 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 13585 | 13776 |
| ADA82347.1 | GU196279_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 1264 | 2745 |
| ADA82387.1 | GU196279_p43 | hypothetical protein | phrog_9632 | unknown function | unknown function | 1 | 37830 | 38126 |
| ADA82396.1 | GU196279_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 41712 | 42292 |
| ADA82396.1 | GU196279_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 1 | 4 |
| ADA82348.1 | GU196279_p4 | head protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 2782 | 3858 |
| ADA82377.1 | GU196279_p32 | C-specific methylase | phrog_363 | DNA methyltransferase | other | -1 | 25831 | 26655 |
| ADA82395.1 | GU196279_p51 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 41140 | 41376 |
| ADA82393.1 | GU196279_p49 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 40546 | 40776 |
| ADA82391.1 | GU196279_p47 | hypothetical protein | phrog_1402 | unknown function | unknown function | 1 | 39886 | 40131 |
| ADA82351.1 | GU196279_p7 | spanin | phrog_1267 | Rz-like spanin | lysis | 1 | 4893 | 5156 |
| ADA82362.1 | GU196279_p18 | tail protein | phrog_290 | minor tail protein | tail | 1 | 10185 | 11351 |
| ADA82380.1 | GU196279_p36 | hypothetical protein | phrog_20588 | unknown function | unknown function | -1 | 30655 | 31002 |
| ADA82363.1 | GU196279_p19 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 11380 | 11934 |
| ADA82368.1 | GU196279_p23 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 13944 | 14357 |
| ADA82368.1 | GU196279_p23 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 14357 | 14725 |
| ADA82376.1 | GU196279_p33 | Mte8-like protein | phrog_1008 | DNA methyltransferase | other | -1 | 25875 | 26567 |
| ADA82385.1 | GU196279_p41 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 34739 | 34909 |
| ADA82386.1 | GU196279_p42 | hypothetical protein | phrog_6094 | unknown function | unknown function | 1 | 37118 | 37630 |
| ADA82369.1 | GU196279_p25 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 14718 | 16991 |
| ADA82346.1 | GU196279_p2 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1251 |
| ADA82383.1 | GU196279_p39 | helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 32192 | 34450 |
| ADA82353.1 | GU196279_p9 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 5943 | 6992 |
| ADA82358.1 | GU196279_p14 | hypothetical protein | phrog_3614 | unknown function | unknown function | 1 | 8404 | 9018 |
| ADA82375.1 | GU196279_p31 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 24414 | 25838 |
| ADA82378.1 | GU196279_p34 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27511 | 29607 |
| ADA82356.1 | GU196279_p12 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 7706 | 7885 |