Genomic map of Escherichia phage K1-ind(2) (GU196280)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
GU196280
Definition
Escherichia phage K1ind2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; Escherichia virus K1ind2.
DB of origin
PVOG
Length
42765
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
51.34
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADA82420.1 GU196280_p25 tape measure protein phrog_1538 tail length tape measure protein tail 1 14719 16992
ADA82427.1 GU196280_p33 Mte8-like protein phrog_1008 DNA methyltransferase other -1 25810 26607
ADA82413.1 GU196280_p18 tail protein phrog_290 minor tail protein tail 1 10186 11352
ADA82442.1 GU196280_p47 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 41112 41342
ADA82418.1 GU196280_p24 hypothetical protein phrog_313 Tail assembly chaperone tail 1 13945 14361
ADA82424.1 GU196280_p29 tail protein phrog_469 tail protein tail 1 19264 21819
ADA82406.1 GU196280_p11 hypothetical protein phrog_4069 Hoc-like head decoration head and packaging 1 7320 7670
ADA82430.1 GU196280_p35 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29791 30417
ADA82422.1 GU196280_p27 hypothetical protein phrog_396 minor tail protein tail 1 18396 18911
ADA82436.1 GU196280_p41 hypothetical protein phrog_9632 unknown function unknown function 1 38324 38617
ADA82425.1 GU196280_p30 tailspike 63D sialidase phrog_20900 tail spike protein tail 1 21832 23997
ADA82433.1 GU196280_p38 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 32895 35162
ADA82398.1 GU196280_p3 structural protein phrog_145 portal protein head and packaging 1 1264 2745
ADA82426.1 GU196280_p31 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 24349 25773
ADA82412.1 GU196280_p17 hypothetical protein phrog_179 tail terminator connector 1 9770 10183
ADA82416.1 GU196280_p21 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 12417 13547
ADA82407.1 GU196280_p12 hypothetical protein phrog_4451 unknown function unknown function 1 7707 7886
ADA82405.1 GU196280_p10 hypothetical protein phrog_1954 virion structural protein head and packaging 1 7053 7307
ADA82428.1 GU196280_p32 C-specific methylase phrog_363 DNA methyltransferase other -1 25766 26695
ADA82443.1 GU196280_p48 hypothetical protein phrog_268 unknown function unknown function 1 41594 41830
ADA82437.1 GU196280_p42 holin-like, class II phrog_2359 holin lysis 1 38693 39001
ADA82415.1 GU196280_p20 kinase-phosphatase phrog_415 polynucleotide kinase other -1 11935 12420
ADA82409.1 GU196280_p14 hypothetical protein phrog_3614 unknown function unknown function 1 8405 9019
ADA82444.1 GU196280_p1 hypothetical protein phrog_3064 terminase head and packaging 1 42185 42765
ADA82444.1 GU196280_p1 hypothetical protein phrog_3064 terminase head and packaging 1 1 4
ADA82411.1 GU196280_p15 tail protein phrog_17193 tail completion or Neck1 protein connector 1 9019 9375
ADA82411.1 GU196280_p15 tail protein phrog_17193 tail completion or Neck1 protein connector 1 9375 9770
ADA82400.1 GU196280_p5 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 3858 4319
ADA82397.1 GU196280_p2 terminase phrog_2 terminase large subunit head and packaging 1 1 1251
ADA82410.1 GU196280_p16 hypothetical protein phrog_161 head closure Hc1 connector 1 9019 9378
ADA82423.1 GU196280_p28 hypothetical protein phrog_329 minor tail protein tail 1 18908 19273
ADA82431.1 GU196280_p36 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 30504 31754
ADA82440.1 GU196280_p45 hypothetical protein singleton unknown function unknown function 1 40542 40697
ADA82419.1 GU196280_p23 hypothetical protein phrog_15027 tail assembly chaperone tail 1 13945 14358
ADA82419.1 GU196280_p23 hypothetical protein phrog_15027 tail assembly chaperone tail 1 14358 14726
ADA82421.1 GU196280_p26 hypothetical protein phrog_11600 unknown function unknown function 1 16992 18392
ADA82402.1 GU196280_p7 spanin phrog_1267 Rz-like spanin lysis 1 4894 5157
ADA82414.1 GU196280_p19 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 11381 11935
ADA82439.1 GU196280_p44 endolysin phrog_7 endolysin lysis 1 39244 39729
ADA82417.1 GU196280_p22 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 13586 13777
ADA82435.1 GU196280_p40 hypothetical protein phrog_6094 unknown function unknown function 1 37576 38121
ADA82401.1 GU196280_p6 spanin phrog_2536 Rz-like spanin lysis 1 4662 5048
ADA82432.1 GU196280_p37 hypothetical protein phrog_3127 unknown function unknown function -1 32067 32537
ADA82403.1 GU196280_p8 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 5186 5941
ADA82399.1 GU196280_p4 head protein, SPP1family phrog_241 head morphogenesis head and packaging 1 2782 3858
ADA82408.1 GU196280_p13 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7890 8402
ADA82429.1 GU196280_p34 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27551 29731
ADA82438.1 GU196280_p43 holin-like, class I phrog_2508 holin lysis 1 38994 39266
ADA82441.1 GU196280_p46 hypothetical protein phrog_9023 unknown function unknown function 1 40690 40938
ADA82434.1 GU196280_p39 hypothetical protein phrog_5169 unknown function unknown function -1 35221 35496
ADA82404.1 GU196280_p9 major capsid protein phrog_247 major head protein head and packaging 1 5944 6993