| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
GU196280 |
Definition |
Escherichia phage K1ind2, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; Escherichia virus K1ind2. |
DB of origin |
PVOG |
Length |
42765 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
51.34 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ADA82420.1 | GU196280_p25 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 14719 | 16992 |
| ADA82427.1 | GU196280_p33 | Mte8-like protein | phrog_1008 | DNA methyltransferase | other | -1 | 25810 | 26607 |
| ADA82413.1 | GU196280_p18 | tail protein | phrog_290 | minor tail protein | tail | 1 | 10186 | 11352 |
| ADA82442.1 | GU196280_p47 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 41112 | 41342 |
| ADA82418.1 | GU196280_p24 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 13945 | 14361 |
| ADA82424.1 | GU196280_p29 | tail protein | phrog_469 | tail protein | tail | 1 | 19264 | 21819 |
| ADA82406.1 | GU196280_p11 | hypothetical protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 7320 | 7670 |
| ADA82430.1 | GU196280_p35 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29791 | 30417 |
| ADA82422.1 | GU196280_p27 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 18396 | 18911 |
| ADA82436.1 | GU196280_p41 | hypothetical protein | phrog_9632 | unknown function | unknown function | 1 | 38324 | 38617 |
| ADA82425.1 | GU196280_p30 | tailspike 63D sialidase | phrog_20900 | tail spike protein | tail | 1 | 21832 | 23997 |
| ADA82433.1 | GU196280_p38 | helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 32895 | 35162 |
| ADA82398.1 | GU196280_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 1264 | 2745 |
| ADA82426.1 | GU196280_p31 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 24349 | 25773 |
| ADA82412.1 | GU196280_p17 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 9770 | 10183 |
| ADA82416.1 | GU196280_p21 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 12417 | 13547 |
| ADA82407.1 | GU196280_p12 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 7707 | 7886 |
| ADA82405.1 | GU196280_p10 | hypothetical protein | phrog_1954 | virion structural protein | head and packaging | 1 | 7053 | 7307 |
| ADA82428.1 | GU196280_p32 | C-specific methylase | phrog_363 | DNA methyltransferase | other | -1 | 25766 | 26695 |
| ADA82443.1 | GU196280_p48 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 41594 | 41830 |
| ADA82437.1 | GU196280_p42 | holin-like, class II | phrog_2359 | holin | lysis | 1 | 38693 | 39001 |
| ADA82415.1 | GU196280_p20 | kinase-phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 11935 | 12420 |
| ADA82409.1 | GU196280_p14 | hypothetical protein | phrog_3614 | unknown function | unknown function | 1 | 8405 | 9019 |
| ADA82444.1 | GU196280_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 42185 | 42765 |
| ADA82444.1 | GU196280_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 1 | 4 |
| ADA82411.1 | GU196280_p15 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 9019 | 9375 |
| ADA82411.1 | GU196280_p15 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 9375 | 9770 |
| ADA82400.1 | GU196280_p5 | tail protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 3858 | 4319 |
| ADA82397.1 | GU196280_p2 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1251 |
| ADA82410.1 | GU196280_p16 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 9019 | 9378 |
| ADA82423.1 | GU196280_p28 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 18908 | 19273 |
| ADA82431.1 | GU196280_p36 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 30504 | 31754 |
| ADA82440.1 | GU196280_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40542 | 40697 |
| ADA82419.1 | GU196280_p23 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 13945 | 14358 |
| ADA82419.1 | GU196280_p23 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 14358 | 14726 |
| ADA82421.1 | GU196280_p26 | hypothetical protein | phrog_11600 | unknown function | unknown function | 1 | 16992 | 18392 |
| ADA82402.1 | GU196280_p7 | spanin | phrog_1267 | Rz-like spanin | lysis | 1 | 4894 | 5157 |
| ADA82414.1 | GU196280_p19 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 11381 | 11935 |
| ADA82439.1 | GU196280_p44 | endolysin | phrog_7 | endolysin | lysis | 1 | 39244 | 39729 |
| ADA82417.1 | GU196280_p22 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 13586 | 13777 |
| ADA82435.1 | GU196280_p40 | hypothetical protein | phrog_6094 | unknown function | unknown function | 1 | 37576 | 38121 |
| ADA82401.1 | GU196280_p6 | spanin | phrog_2536 | Rz-like spanin | lysis | 1 | 4662 | 5048 |
| ADA82432.1 | GU196280_p37 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 32067 | 32537 |
| ADA82403.1 | GU196280_p8 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 5186 | 5941 |
| ADA82399.1 | GU196280_p4 | head protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 2782 | 3858 |
| ADA82408.1 | GU196280_p13 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7890 | 8402 |
| ADA82429.1 | GU196280_p34 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27551 | 29731 |
| ADA82438.1 | GU196280_p43 | holin-like, class I | phrog_2508 | holin | lysis | 1 | 38994 | 39266 |
| ADA82441.1 | GU196280_p46 | hypothetical protein | phrog_9023 | unknown function | unknown function | 1 | 40690 | 40938 |
| ADA82434.1 | GU196280_p39 | hypothetical protein | phrog_5169 | unknown function | unknown function | -1 | 35221 | 35496 |
| ADA82404.1 | GU196280_p9 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 5944 | 6993 |