| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
GU196281 |
Definition |
Escherichia phage K1ind3, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; unclassified Kagunavirus. |
DB of origin |
PVOG |
Length |
43461 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
51.15 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ADA82453.1 | GU196281_p10 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 6640 | 7689 |
| ADA82482.1 | GU196281_p39 | helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 33591 | 35858 |
| ADA82459.1 | GU196281_p17 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 9715 | 10074 |
| ADA82465.1 | GU196281_p22 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 13113 | 14243 |
| ADA82492.1 | GU196281_p49 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 42290 | 42526 |
| ADA82446.1 | GU196281_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 1264 | 2745 |
| ADA82493.1 | GU196281_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 42881 | 43461 |
| ADA82493.1 | GU196281_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 1 | 4 |
| ADA82483.1 | GU196281_p40 | hypothetical protein | phrog_5169 | unknown function | unknown function | -1 | 35917 | 36192 |
| ADA82486.1 | GU196281_p43 | holin-like, class II | phrog_2359 | holin | lysis | 1 | 39389 | 39697 |
| ADA82455.1 | GU196281_p12 | hypothetical protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 8016 | 8366 |
| ADA82470.1 | GU196281_p27 | hypothetical protein | phrog_11600 | unknown function | unknown function | 1 | 17688 | 19088 |
| ADA82457.1 | GU196281_p14 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 8586 | 9098 |
| ADA82463.1 | GU196281_p20 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 12077 | 12631 |
| ADA82479.1 | GU196281_p36 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 30487 | 31113 |
| ADA82472.1 | GU196281_p29 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 19604 | 19969 |
| ADA82491.1 | GU196281_p48 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 41808 | 42038 |
| ADA82445.1 | GU196281_p2 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1251 |
| ADA82471.1 | GU196281_p28 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 19092 | 19607 |
| ADA82468.1 | GU196281_p24 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 14641 | 15054 |
| ADA82468.1 | GU196281_p24 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 15054 | 15422 |
| ADA82480.1 | GU196281_p37 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 31200 | 32450 |
| ADA82478.1 | GU196281_p35 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28247 | 30427 |
| ADA82477.1 | GU196281_p33 | C-specific methylase | phrog_363 | DNA methyltransferase | other | -1 | 26462 | 27391 |
| ADA82487.1 | GU196281_p44 | holin-like, class I | phrog_2508 | holin | lysis | 1 | 39690 | 39962 |
| ADA82454.1 | GU196281_p11 | hypothetical protein | phrog_1954 | virion structural protein | head and packaging | 1 | 7749 | 8003 |
| ADA82467.1 | GU196281_p25 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 14641 | 15057 |
| ADA82484.1 | GU196281_p41 | hypothetical protein | phrog_6094 | unknown function | unknown function | 1 | 38272 | 38817 |
| ADA82458.1 | GU196281_p15 | hypothetical protein | phrog_3614 | unknown function | unknown function | 1 | 9101 | 9715 |
| ADA82460.1 | GU196281_p16 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 9715 | 10071 |
| ADA82460.1 | GU196281_p16 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 10071 | 10466 |
| ADA82488.1 | GU196281_p45 | endolysin | phrog_7 | endolysin | lysis | 1 | 39940 | 40425 |
| ADA82489.1 | GU196281_p46 | hypothetical protein | phrog_1402 | unknown function | unknown function | 1 | 41148 | 41393 |
| ADA82449.1 | GU196281_p6 | tail protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 4556 | 5014 |
| ADA82469.1 | GU196281_p26 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 15415 | 17688 |
| ADA82462.1 | GU196281_p19 | tail protein | phrog_290 | minor tail protein | tail | 1 | 10882 | 12048 |
| ADA82466.1 | GU196281_p23 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 14282 | 14473 |
| ADA82474.1 | GU196281_p31 | tailspike 63D sialidase | phrog_20900 | tail spike protein | tail | 1 | 22528 | 24693 |
| ADA82450.1 | GU196281_p7 | spanin | phrog_2536 | Rz-like spanin | lysis | 1 | 5358 | 5744 |
| ADA82481.1 | GU196281_p38 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 32763 | 33233 |
| ADA82461.1 | GU196281_p18 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 10466 | 10879 |
| ADA82475.1 | GU196281_p32 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25045 | 26469 |
| ADA82448.1 | GU196281_p5 | hypothetical protein | phrog_953 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3929 | 4552 |
| ADA82490.1 | GU196281_p47 | hypothetical protein | phrog_9023 | unknown function | unknown function | 1 | 41386 | 41634 |
| ADA82476.1 | GU196281_p34 | Mte8-like protein | phrog_1008 | DNA methyltransferase | other | -1 | 26506 | 27303 |
| ADA82485.1 | GU196281_p42 | hypothetical protein | phrog_9632 | unknown function | unknown function | 1 | 39020 | 39313 |
| ADA82447.1 | GU196281_p4 | head protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 2782 | 3858 |
| ADA82464.1 | GU196281_p21 | kinase-phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 12631 | 13116 |
| ADA82452.1 | GU196281_p9 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 5882 | 6637 |
| ADA82456.1 | GU196281_p13 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 8403 | 8582 |
| ADA82451.1 | GU196281_p8 | spanin | phrog_1267 | Rz-like spanin | lysis | 1 | 5590 | 5853 |
| ADA82473.1 | GU196281_p30 | tail protein | phrog_469 | tail protein | tail | 1 | 19960 | 22515 |