Genomic map of Escherichia phage K1-ind(3) (GU196281)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
GU196281
Definition
Escherichia phage K1ind3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; unclassified Kagunavirus.
DB of origin
PVOG
Length
43461
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
51.15
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADA82453.1 GU196281_p10 major capsid protein phrog_247 major head protein head and packaging 1 6640 7689
ADA82482.1 GU196281_p39 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 33591 35858
ADA82459.1 GU196281_p17 hypothetical protein phrog_161 head closure Hc1 connector 1 9715 10074
ADA82465.1 GU196281_p22 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 13113 14243
ADA82492.1 GU196281_p49 hypothetical protein phrog_268 unknown function unknown function 1 42290 42526
ADA82446.1 GU196281_p3 structural protein phrog_145 portal protein head and packaging 1 1264 2745
ADA82493.1 GU196281_p1 hypothetical protein phrog_3064 terminase head and packaging 1 42881 43461
ADA82493.1 GU196281_p1 hypothetical protein phrog_3064 terminase head and packaging 1 1 4
ADA82483.1 GU196281_p40 hypothetical protein phrog_5169 unknown function unknown function -1 35917 36192
ADA82486.1 GU196281_p43 holin-like, class II phrog_2359 holin lysis 1 39389 39697
ADA82455.1 GU196281_p12 hypothetical protein phrog_4069 Hoc-like head decoration head and packaging 1 8016 8366
ADA82470.1 GU196281_p27 hypothetical protein phrog_11600 unknown function unknown function 1 17688 19088
ADA82457.1 GU196281_p14 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 8586 9098
ADA82463.1 GU196281_p20 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 12077 12631
ADA82479.1 GU196281_p36 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 30487 31113
ADA82472.1 GU196281_p29 hypothetical protein phrog_329 minor tail protein tail 1 19604 19969
ADA82491.1 GU196281_p48 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 41808 42038
ADA82445.1 GU196281_p2 terminase phrog_2 terminase large subunit head and packaging 1 1 1251
ADA82471.1 GU196281_p28 hypothetical protein phrog_396 minor tail protein tail 1 19092 19607
ADA82468.1 GU196281_p24 hypothetical protein phrog_15027 tail assembly chaperone tail 1 14641 15054
ADA82468.1 GU196281_p24 hypothetical protein phrog_15027 tail assembly chaperone tail 1 15054 15422
ADA82480.1 GU196281_p37 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 31200 32450
ADA82478.1 GU196281_p35 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28247 30427
ADA82477.1 GU196281_p33 C-specific methylase phrog_363 DNA methyltransferase other -1 26462 27391
ADA82487.1 GU196281_p44 holin-like, class I phrog_2508 holin lysis 1 39690 39962
ADA82454.1 GU196281_p11 hypothetical protein phrog_1954 virion structural protein head and packaging 1 7749 8003
ADA82467.1 GU196281_p25 hypothetical protein phrog_313 Tail assembly chaperone tail 1 14641 15057
ADA82484.1 GU196281_p41 hypothetical protein phrog_6094 unknown function unknown function 1 38272 38817
ADA82458.1 GU196281_p15 hypothetical protein phrog_3614 unknown function unknown function 1 9101 9715
ADA82460.1 GU196281_p16 tail protein phrog_17193 tail completion or Neck1 protein connector 1 9715 10071
ADA82460.1 GU196281_p16 tail protein phrog_17193 tail completion or Neck1 protein connector 1 10071 10466
ADA82488.1 GU196281_p45 endolysin phrog_7 endolysin lysis 1 39940 40425
ADA82489.1 GU196281_p46 hypothetical protein phrog_1402 unknown function unknown function 1 41148 41393
ADA82449.1 GU196281_p6 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 4556 5014
ADA82469.1 GU196281_p26 tape measure protein phrog_1538 tail length tape measure protein tail 1 15415 17688
ADA82462.1 GU196281_p19 tail protein phrog_290 minor tail protein tail 1 10882 12048
ADA82466.1 GU196281_p23 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 14282 14473
ADA82474.1 GU196281_p31 tailspike 63D sialidase phrog_20900 tail spike protein tail 1 22528 24693
ADA82450.1 GU196281_p7 spanin phrog_2536 Rz-like spanin lysis 1 5358 5744
ADA82481.1 GU196281_p38 hypothetical protein phrog_3127 unknown function unknown function -1 32763 33233
ADA82461.1 GU196281_p18 hypothetical protein phrog_179 tail terminator connector 1 10466 10879
ADA82475.1 GU196281_p32 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 25045 26469
ADA82448.1 GU196281_p5 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3929 4552
ADA82490.1 GU196281_p47 hypothetical protein phrog_9023 unknown function unknown function 1 41386 41634
ADA82476.1 GU196281_p34 Mte8-like protein phrog_1008 DNA methyltransferase other -1 26506 27303
ADA82485.1 GU196281_p42 hypothetical protein phrog_9632 unknown function unknown function 1 39020 39313
ADA82447.1 GU196281_p4 head protein, SPP1family phrog_241 head morphogenesis head and packaging 1 2782 3858
ADA82464.1 GU196281_p21 kinase-phosphatase phrog_415 polynucleotide kinase other -1 12631 13116
ADA82452.1 GU196281_p9 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 5882 6637
ADA82456.1 GU196281_p13 hypothetical protein phrog_4451 unknown function unknown function 1 8403 8582
ADA82451.1 GU196281_p8 spanin phrog_1267 Rz-like spanin lysis 1 5590 5853
ADA82473.1 GU196281_p30 tail protein phrog_469 tail protein tail 1 19960 22515