Genomic map of Pseudomonas phage vB_PaeP_C1-14_Or (HE983844)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
HE983844
Definition
Pseudomonas phage vB_PaeP_C1-14_Or complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus; unclassified Bruynoghevirus.
DB of origin
PVOG
Length
45469
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
52
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
CCM43530.1 HE983844_p50 hypothetical protein phrog_20462 unknown function unknown function -1 38871 39323
CCM43489.1 HE983844_p9 hypothetical protein phrog_22224 unknown function unknown function 1 8339 8698
CCM43499.1 HE983844_p19 hypothetical protein phrog_8295 virion structural protein head and packaging 1 18230 19294
CCM43529.1 HE983844_p49 hypothetical protein phrog_14798 unknown function unknown function -1 38535 38864
CCM43512.1 HE983844_p32 DNA polymerase1 phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 24889 26508
CCM43511.1 HE983844_p31 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24259 24819
CCM43488.1 HE983844_p8 constituent protein phrog_2941 virion structural protein head and packaging 1 7870 8496
CCM43534.1 HE983844_p54 hypothetical protein phrog_11608 unknown function unknown function -1 40346 40678
CCM43490.1 HE983844_p10 hypothetical protein phrog_8140 unknown function unknown function 1 8682 8930
CCM43541.1 HE983844_p61 hypothetical protein phrog_8365 unknown function unknown function -1 42444 42677
CCM43523.1 HE983844_p43 hypothetical protein phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 32380 33933
CCM43527.1 HE983844_p47 hypothetical protein phrog_7973 unknown function unknown function -1 36509 37642
CCM43528.1 HE983844_p48 hypothetical protein phrog_9504 unknown function unknown function -1 37459 38583
CCM43487.1 HE983844_p7 hypothetical protein phrog_3982 unknown function unknown function 1 7547 7867
CCM43524.1 HE983844_p44 similar to L-gluamine-D-fructose-6-phosphate aminotransferase gene of Bacillus subilis phrog_7631 amidoligase enzyme other -1 33946 35142
CCM43507.1 HE983844_p27 hypothetical protein phrog_7967 unknown function unknown function -1 21690 22670
CCM43538.1 HE983844_p58 hypothetical protein phrog_23405 unknown function unknown function -1 41710 41994
CCM43498.1 HE983844_p18 constituent protein phrog_6958 virion structural protein head and packaging 1 15226 18396
CCM43497.1 HE983844_p17 hypothetical protein phrog_7725 virion structural protein head and packaging 1 13532 15070
CCM43533.1 HE983844_p53 hypothetical protein phrog_11608 unknown function unknown function -1 40074 40481
CCM43494.1 HE983844_p14 hypothetical protein phrog_7642 unknown function unknown function 1 11800 12234
CCM43504.1 HE983844_p24 hypothetical protein phrog_9960 unknown function unknown function -1 20519 20674
CCM43513.1 HE983844_p33 hypothetical protein phrog_9754 unknown function unknown function -1 26527 26799
CCM43539.1 HE983844_p59 hypothetical protein phrog_24677 unknown function unknown function -1 41966 42214
CCM43515.1 HE983844_p35 hypothetical protein phrog_9555 unknown function unknown function -1 27528 27692
CCM43503.1 HE983844_p23 hypothetical protein phrog_2251 unknown function unknown function -1 20307 20516
CCM43506.1 HE983844_p26 hypothetical protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism -1 21488 21928
CCM43508.1 HE983844_p28 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 22645 23586
CCM43532.1 HE983844_p52 hypothetical protein phrog_8299 unknown function unknown function -1 39667 40077
CCM43501.1 HE983844_p21 hypothetical protein phrog_12822 unknown function unknown function -1 19742 20044
CCM43493.1 HE983844_p13 constituent protein phrog_8092 unknown function unknown function 1 11063 11803
CCM43486.1 HE983844_p6 major head protein phrog_1328 major head protein head and packaging 1 6546 7499
CCM43519.1 HE983844_p39 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 28677 30386
CCM43492.1 HE983844_p12 constituent protein phrog_3287 virion structural protein head and packaging 1 9564 11117
CCM43482.1 HE983844_p2 lysozyme phrog_7 endolysin lysis 1 1203 1700
CCM43509.1 HE983844_p29 hypothetical protein phrog_8565 unknown function unknown function -1 23513 23806
CCM43505.1 HE983844_p25 constituent protein phrog_221 metallo-phosphoesterase other -1 20734 21495
CCM43543.1 HE983844_p63 hypothetical protein phrog_1448 unknown function unknown function -1 43597 44079
CCM43481.1 HE983844_p1 hypothetical protein phrog_51 terminase small subunit head and packaging 1 812 1270
CCM43500.1 HE983844_p20 hypothetical protein phrog_8259 unknown function unknown function 1 19337 19693
CCM43495.1 HE983844_p15 hypothetical protein phrog_7477 unknown function unknown function 1 12215 13159
CCM43544.1 HE983844_p64 hypothetical protein phrog_14276 unknown function unknown function -1 44090 44395
CCM43521.1 HE983844_p41 similar to a conserved hypotheical protein of Vibrio cholerae phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 30746 31138
CCM43483.1 HE983844_p3 terminase phrog_2 terminase large subunit head and packaging 1 1700 3148
CCM43525.1 HE983844_p45 hypothetical protein phrog_4877 unknown function unknown function -1 35121 35699
CCM43531.1 HE983844_p51 hypothetical protein phrog_11110 unknown function unknown function -1 39313 39540
CCM43510.1 HE983844_p30 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis -1 23778 24413
CCM43520.1 HE983844_p40 hypothetical protein phrog_8197 unknown function unknown function -1 30387 30749
CCM43537.1 HE983844_p57 hypothetical protein phrog_14185 unknown function unknown function -1 41433 41708
CCM43496.1 HE983844_p16 hypothetical protein phrog_9927 virion structural protein head and packaging 1 13159 13542
CCM43526.1 HE983844_p46 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 35692 36498
CCM43484.1 HE983844_p4 portal protein phrog_1216 portal protein head and packaging 1 3149 5266
CCM43522.1 HE983844_p42 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 31135 32025
CCM43536.1 HE983844_p56 hypothetical protein phrog_10516 unknown function unknown function -1 40880 41125
CCM43535.1 HE983844_p55 hypothetical protein phrog_9861 unknown function unknown function -1 40609 40986
CCM43517.1 HE983844_p37 hypothetical protein phrog_11010 unknown function unknown function -1 27905 28135
CCM43491.1 HE983844_p11 hypothetical protein phrog_5795 tail protein tail 1 8920 9567
CCM43518.1 HE983844_p38 DNA polymerase2 phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 28187 28714
CCM43502.1 HE983844_p22 hypothetical protein phrog_8402 unknown function unknown function -1 20114 20365
CCM43516.1 HE983844_p36 hypothetical protein phrog_9813 unknown function unknown function -1 27682 27873
CCM43514.1 HE983844_p34 hypothetical protein phrog_7819 tail length tape measure protein tail -1 26729 27418
CCM43540.1 HE983844_p60 hypothetical protein phrog_20857 unknown function unknown function -1 42211 42459
CCM43485.1 HE983844_p5 scaffold protein phrog_3927 head scaffolding protein head and packaging 1 5511 6527
CCM43542.1 HE983844_p62 hypothetical protein phrog_9596 unknown function unknown function -1 43306 43539