Genomic map of Leuconostoc phage phiMH1 (HM596271)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
HM596271
Definition
Leuconostoc phage phiMH1, partial genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
38709
Host Name
Leuconostoc pseudomesenteroides
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
38.67
Number of singletons
17
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADP69211.1 HM596271_p27 hypothetical protein phrog_23408 unknown function unknown function 1 11961 12131
ADP69217.1 HM596271_p33 terminase large subunit phrog_9 terminase large subunit head and packaging 1 15291 17036
ADP69249.1 HM596271_p65 negative regulator singleton unknown function unknown function -1 38418 38709
ADP69199.1 HM596271_p15 hypothetical protein phrog_31556 unknown function unknown function 1 6484 6780
ADP69220.1 HM596271_p36 portal protein phrog_12 portal protein head and packaging 1 17472 18371
ADP69197.1 HM596271_p13 replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 5364 6251
ADP69234.1 HM596271_p50 hypothetical protein phrog_12329 virion structural protein head and packaging 1 26447 28966
ADP69222.1 HM596271_p38 capsid protein phrog_10 major head protein head and packaging 1 18911 20119
ADP69214.1 HM596271_p30 hypothetical protein phrog_32090 unknown function unknown function 1 13540 13905
ADP69225.1 HM596271_p41 hypothetical protein singleton unknown function unknown function 1 20906 21070
ADP69212.1 HM596271_p28 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 12131 13342
ADP69195.1 HM596271_p11 hypothetical protein singleton unknown function unknown function 1 4566 5039
ADP69196.1 HM596271_p12 hypothetical protein singleton unknown function unknown function 1 5014 5220
ADP69248.1 HM596271_p64 integrase phrog_1 integrase integration and excision -1 37181 38251
ADP69232.1 HM596271_p48 hypothetical protein singleton unknown function unknown function 1 25726 25974
ADP69208.1 HM596271_p24 hypothetical protein phrog_10077 unknown function unknown function 1 9933 10118
ADP69240.1 HM596271_p56 hypothetical protein phrog_29365 unknown function unknown function 1 32233 32376
ADP69213.1 HM596271_p29 hypothetical protein phrog_1374 unknown function unknown function 1 13352 13522
ADP69233.1 HM596271_p49 tail protein phrog_33 distal tail protein Dit tail 1 25962 26450
ADP69205.1 HM596271_p21 hypothetical protein phrog_29407 unknown function unknown function 1 8972 9517
ADP69228.1 HM596271_p44 major tail protein phrog_88 major tail protein tail 1 21594 22175
ADP69207.1 HM596271_p23 hypothetical protein singleton unknown function unknown function 1 9724 9936
ADP69221.1 HM596271_p37 prohead protase singleton unknown function unknown function 1 18648 18914
ADP69218.1 HM596271_p34 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover 1 17033 17218
ADP69241.1 HM596271_p57 hypothetical protein phrog_33622 unknown function unknown function 1 32379 32615
ADP69216.1 HM596271_p32 terminase small subunit phrog_83 terminase small subunit head and packaging 1 14547 15029
ADP69206.1 HM596271_p22 hypothetical protein phrog_32088 unknown function unknown function 1 9517 9699
ADP69194.1 HM596271_p10 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 3754 4566
ADP69203.1 HM596271_p19 hypothetical protein phrog_36531 unknown function unknown function 1 8345 8611
ADP69227.1 HM596271_p43 hypothetical protein phrog_78 tail terminator connector 1 21260 21592
ADP69187.1 HM596271_p3 transcriptional regulator phrog_34700 transcriptional regulator transcription regulation 1 1084 1308
ADP69238.1 HM596271_p54 autotransporter adhesin singleton unknown function unknown function 1 30184 30777
ADP69204.1 HM596271_p20 hypothetical protein phrog_29318 unknown function unknown function 1 8601 8972
ADP69239.1 HM596271_p55 hypothetical protein singleton unknown function unknown function 1 30783 32246
ADP69190.1 HM596271_p6 hypothetical protein singleton unknown function unknown function -1 2334 2918
ADP69226.1 HM596271_p42 hypothetical protein singleton unknown function unknown function 1 21081 21263
ADP69209.1 HM596271_p25 transcriptional activator phrog_2198 Alt-like transcription activator transcription regulation 1 10129 10521
ADP69229.1 HM596271_p45 hypothetical protein phrog_709 unknown function unknown function 1 22223 22585
ADP69192.1 HM596271_p8 hypothetical protein phrog_37946 unknown function unknown function 1 3152 3376
ADP69210.1 HM596271_p26 methylase phrog_56 DNA methyltransferase other 1 10942 11964
ADP69202.1 HM596271_p18 Holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 7909 8352
ADP69191.1 HM596271_p7 hypothetical protein phrog_30778 unknown function unknown function 1 2983 3147
ADP69224.1 HM596271_p40 head-tail adaptor phrog_1951 head-tail adaptor connector 1 20605 20919
ADP69188.1 HM596271_p4 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 1324 1518
ADP69237.1 HM596271_p53 autotransporter adhesin singleton unknown function unknown function 1 29687 30187
ADP69189.1 HM596271_p5 anti-repressor phrog_63 anti-repressor Ant transcription regulation 1 1524 2252
ADP69193.1 HM596271_p9 hypothetical protein phrog_38826 unknown function unknown function 1 3467 3751
ADP69230.1 HM596271_p46 hypothetical protein singleton unknown function unknown function 1 22669 22791
ADP69201.1 HM596271_p17 peptidase phrog_32868 unknown function unknown function 1 7604 7900
ADP69246.1 HM596271_p62 hypothetical protein phrog_31790 unknown function unknown function 1 34996 35499
ADP69244.1 HM596271_p60 holin phrog_2609 holin lysis 1 33970 34443
ADP69198.1 HM596271_p14 hypothetical protein singleton unknown function unknown function 1 6284 6487
ADP69215.1 HM596271_p31 restriction endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13895 14386
ADP69236.1 HM596271_p52 hypothetical protein singleton unknown function unknown function -1 29464 29598
ADP69219.1 HM596271_p35 hypothetical protein singleton unknown function unknown function 1 17215 17427
ADP69185.1 HM596271_p1 receptor phrog_87 metallo-protease other -1 32 466
ADP69245.1 HM596271_p61 hypothetical protein phrog_5881 unknown function unknown function 1 34583 34984
ADP69247.1 HM596271_p63 hypothetical protein phrog_16307 unknown function unknown function 1 36526 36924
ADP69231.1 HM596271_p47 tape measure protein phrog_58 tail length tape measure protein tail 1 22870 25722
ADP69186.1 HM596271_p2 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 463 858
ADP69243.1 HM596271_p59 lysin phrog_291 endolysin lysis 1 32869 33960
ADP69235.1 HM596271_p51 autotransporter adhesin singleton unknown function unknown function 1 28963 29478
ADP69242.1 HM596271_p58 hypothetical protein phrog_1009 unknown function unknown function 1 32617 32856
ADP69223.1 HM596271_p39 DNA packaging protein phrog_5223 neck protein connector 1 20307 20621
ADP69200.1 HM596271_p16 hypothetical protein phrog_398 unknown function unknown function 1 6777 7478