Genomic map of Vibrio phage ICP3_2009_B (HQ641341)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
HQ641341
Definition
Vibrio phage ICP3_2009_B, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; unclassified Chatterjeevirus.
DB of origin
PVOG
Length
39042
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
42.76
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADX87517.1 HQ641341_p23 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 16688 17140
ADX87506.1 HQ641341_p12 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 8492 10198
ADX87536.1 HQ641341_p42 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 35892 36125
ADX87539.1 HQ641341_p45 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 36601 38319
ADX87522.1 HQ641341_p28 host specificity protein B phrog_10099 unknown function unknown function 1 18701 18991
ADX87534.1 HQ641341_p40 lysis protein phrog_920 holin lysis 1 35138 35332
ADX87504.1 HQ641341_p10 hypothetical protein phrog_5138 unknown function unknown function 1 7798 8193
ADX87516.1 HQ641341_p22 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 16017 16688
ADX87520.1 HQ641341_p26 hypothetical protein phrog_1391 unknown function unknown function 1 18007 18258
ADX87525.1 HQ641341_p31 major capsid protein phrog_267 major head protein head and packaging 1 21666 22793
ADX87524.1 HQ641341_p30 capsid assembly protein phrog_1052 head assembly head and packaging 1 20687 21547
ADX87533.1 HQ641341_p39 tail fiber protein phrog_6256 tail fiber protein tail 1 33377 35116
ADX87515.1 HQ641341_p21 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15050 15925
ADX87499.1 HQ641341_p5 hypothetical protein phrog_11350 unknown function unknown function 1 5903 6229
ADX87530.1 HQ641341_p36 internal virion protein B phrog_805 internal virion protein head and packaging 1 27066 27656
ADX87514.1 HQ641341_p20 hypothetical protein phrog_2294 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 14644 15057
ADX87532.1 HQ641341_p38 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29914 33297
ADX87503.1 HQ641341_p9 hypothetical protein phrog_10197 unknown function unknown function 1 7501 7782
ADX87518.1 HQ641341_p24 lysozyme phrog_822 amidase lysis 1 17140 17574
ADX87496.1 HQ641341_p2 hypothetical protein phrog_11474 unknown function unknown function 1 1078 1269
ADX87521.1 HQ641341_p27 host specificity protein A phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18294 18701
ADX87529.1 HQ641341_p35 internal virion protein A phrog_308 internal virion protein head and packaging 1 26561 27079
ADX87500.1 HQ641341_p6 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 6241 6924
ADX87497.1 HQ641341_p3 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 1860 4511
ADX87526.1 HQ641341_p32 tail tubular protein A phrog_446 tail protein tail 1 22859 23452
ADX87498.1 HQ641341_p4 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 4639 5619
ADX87512.1 HQ641341_p18 hypothetical protein phrog_11673 unknown function unknown function 1 14120 14311
ADX87523.1 HQ641341_p29 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 19009 20607
ADX87519.1 HQ641341_p25 hypothetical protein phrog_1447 unknown function unknown function 1 17710 17991
ADX87505.1 HQ641341_p11 hypothetical protein phrog_11152 unknown function unknown function 1 8298 8495
ADX87507.1 HQ641341_p13 hypothetical protein phrog_10688 unknown function unknown function 1 10259 10573
ADX87513.1 HQ641341_p19 hypothetical protein phrog_1334 unknown function unknown function 1 14447 14644
ADX87502.1 HQ641341_p8 hypothetical protein phrog_11648 unknown function unknown function 1 7310 7462
ADX87511.1 HQ641341_p17 hypothetical protein phrog_10513 unknown function unknown function 1 13741 14133
ADX87510.1 HQ641341_p16 hypothetical protein phrog_10985 unknown function unknown function 1 13447 13611
ADX87509.1 HQ641341_p15 hypothetical protein phrog_10848 unknown function unknown function 1 11104 11361
ADX87531.1 HQ641341_p37 internal virion protein C phrog_1339 internal virion protein head and packaging 1 27688 29901
ADX87508.1 HQ641341_p14 hypothetical protein phrog_10620 unknown function unknown function 1 10659 11117
ADX87535.1 HQ641341_p41 hypothetical protein phrog_12315 unknown function unknown function 1 35449 35880
ADX87495.1 HQ641341_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 526 957
ADX87537.1 HQ641341_p43 hypothetical protein phrog_4712 holin lysis 1 36144 36287
ADX87527.1 HQ641341_p33 tail tubular protein B phrog_457 tail protein tail 1 23464 25848
ADX87538.1 HQ641341_p44 hypothetical protein phrog_10167 unknown function unknown function 1 36287 36484
ADX87528.1 HQ641341_p34 deoxyribonucleoside kinase phrog_761 thymidylate kinase other 1 25936 26568
ADX87501.1 HQ641341_p7 host RNA polymerase inhibitory protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 6966 7139