Genomic map of Vibrio phage ICP3_2007_A (HQ641344)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
HQ641344
Definition
Vibrio phage ICP3_2007_A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; unclassified Chatterjeevirus.
DB of origin
PVOG
Length
39088
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
42.85
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADX87659.1 HQ641344_p24 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 16034 16705
ADX87650.1 HQ641344_p15 hypothetical protein phrog_10620 unknown function unknown function 1 10708 11166
ADX87668.1 HQ641344_p33 major capsid protein phrog_267 major head protein head and packaging 1 21683 22807
ADX87643.1 HQ641344_p8 host RNA polymerase inhibitory protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 7015 7188
ADX87645.1 HQ641344_p10 hypothetical protein phrog_10197 unknown function unknown function 1 7550 7831
ADX87647.1 HQ641344_p12 hypothetical protein phrog_11152 unknown function unknown function 1 8347 8544
ADX87661.1 HQ641344_p26 lysozyme phrog_822 amidase lysis 1 17157 17591
ADX87676.1 HQ641344_p41 tail fiber protein phrog_6256 tail fiber protein tail 1 33391 35130
ADX87674.1 HQ641344_p39 internal virion protein C phrog_1339 internal virion protein head and packaging 1 27702 29915
ADX87646.1 HQ641344_p11 hypothetical protein phrog_5138 unknown function unknown function 1 7847 8242
ADX87653.1 HQ641344_p18 hypothetical protein phrog_10985 unknown function unknown function 1 13464 13628
ADX87640.1 HQ641344_p5 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 4688 5668
ADX87678.1 HQ641344_p43 hypothetical protein phrog_12315 unknown function unknown function 1 35346 35894
ADX87663.1 HQ641344_p28 hypothetical protein phrog_1391 unknown function unknown function 1 18024 18275
ADX87679.1 HQ641344_p44 DNA packaging protein phrog_1351 terminase small subunit head and packaging 1 35906 36139
ADX87654.1 HQ641344_p19 hypothetical protein phrog_10513 unknown function unknown function 1 13758 14150
ADX87656.1 HQ641344_p21 hypothetical protein phrog_1334 unknown function unknown function 1 14464 14661
ADX87636.1 HQ641344_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 515 946
ADX87642.1 HQ641344_p7 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 6290 6973
ADX87649.1 HQ641344_p14 hypothetical protein phrog_10688 unknown function unknown function 1 10308 10622
ADX87670.1 HQ641344_p35 tail tubular protein B phrog_457 tail protein tail 1 23478 25862
ADX87672.1 HQ641344_p37 internal virion protein A phrog_308 internal virion protein head and packaging 1 26575 27093
ADX87637.1 HQ641344_p2 hypothetical protein phrog_11474 unknown function unknown function 1 1067 1258
ADX87680.1 HQ641344_p45 hypothetical protein phrog_4712 holin lysis 1 36158 36301
ADX87648.1 HQ641344_p13 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 8541 10247
ADX87652.1 HQ641344_p17 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11417 13453
ADX87658.1 HQ641344_p23 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15067 15942
ADX87671.1 HQ641344_p36 deoxyribonucleoside kinase phrog_761 thymidylate kinase other 1 25950 26582
ADX87639.1 HQ641344_p4 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 1849 4500
ADX87662.1 HQ641344_p27 hypothetical protein phrog_1447 unknown function unknown function 1 17727 18008
ADX87651.1 HQ641344_p16 hypothetical protein phrog_10848 unknown function unknown function 1 11153 11410
ADX87664.1 HQ641344_p29 host specificity protein A phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18311 18718
ADX87665.1 HQ641344_p30 host specificity protein B phrog_10099 unknown function unknown function 1 18718 19008
ADX87641.1 HQ641344_p6 hypothetical protein phrog_11350 unknown function unknown function 1 5952 6278
ADX87673.1 HQ641344_p38 internal virion protein B phrog_805 internal virion protein head and packaging 1 27080 27670
ADX87660.1 HQ641344_p25 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 16705 17157
ADX87667.1 HQ641344_p32 capsid assembly protein phrog_1052 head assembly head and packaging 1 20704 21564
ADX87655.1 HQ641344_p20 hypothetical protein phrog_11673 unknown function unknown function 1 14137 14328
ADX87666.1 HQ641344_p31 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 19026 20624
ADX87657.1 HQ641344_p22 hypothetical protein phrog_2294 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 14661 15074
ADX87677.1 HQ641344_p42 lysis protein phrog_920 holin lysis 1 35152 35346
ADX87644.1 HQ641344_p9 hypothetical protein phrog_11648 unknown function unknown function 1 7359 7511
ADX87681.1 HQ641344_p46 hypothetical protein phrog_10167 unknown function unknown function 1 36301 36498
ADX87669.1 HQ641344_p34 tail tubular protein A phrog_446 tail protein tail 1 22873 23466
ADX87675.1 HQ641344_p40 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29928 33311
ADX87638.1 HQ641344_p3 hypothetical protein phrog_13599 unknown function unknown function 1 1255 1455
ADX87682.1 HQ641344_p47 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 36615 38333