Genomic map of Vibrio phage ICP2_2006_A (HQ641346)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
HQ641346
Definition
Vibrio phage ICP2_2006_A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
PVOG
Length
48626
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
42.48
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ADX87808.1 HQ641346_p54 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 44830 45306
ADX87776.1 HQ641346_p22 hypothetical protein phrog_10745 unknown function unknown function -1 21075 22124
ADX87766.1 HQ641346_p12 hypothetical protein phrog_18064 unknown function unknown function -1 12024 12437
ADX87781.1 HQ641346_p27 hypothetical protein phrog_21943 unknown function unknown function 1 27801 27947
ADX87802.1 HQ641346_p48 hypothetical protein phrog_18140 unknown function unknown function 1 42254 42748
ADX87758.1 HQ641346_p4 hypothetical protein phrog_17082 unknown function unknown function -1 1421 3376
ADX87787.1 HQ641346_p33 hypothetical protein phrog_1965 unknown function unknown function 1 30207 30800
ADX87813.1 HQ641346_p59 hypothetical protein phrog_20277 unknown function unknown function 1 47162 47374
ADX87770.1 HQ641346_p16 hypothetical protein phrog_7931 unknown function unknown function -1 15914 16663
ADX87764.1 HQ641346_p10 hypothetical protein phrog_7592 tail protein tail -1 10943 11737
ADX87763.1 HQ641346_p9 hypothetical protein phrog_9082 unknown function unknown function -1 10732 10932
ADX87774.1 HQ641346_p20 hypothetical protein phrog_8035 unknown function unknown function -1 20231 20734
ADX87791.1 HQ641346_p37 cobalamin biosynthesis protein CobT phrog_17276 aerobic cobaltochelatase CobT subunit moron, auxiliary metabolic gene and host takeover 1 32509 34251
ADX87757.1 HQ641346_p3 hypothetical protein phrog_3899 unknown function unknown function -1 854 1153
ADX87779.1 HQ641346_p25 hypothetical protein phrog_15513 unknown function unknown function 1 26991 27233
ADX87801.1 HQ641346_p47 hypothetical protein phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 41843 42208
ADX87769.1 HQ641346_p15 hypothetical protein phrog_267 major head protein head and packaging -1 14922 15893
ADX87792.1 HQ641346_p38 cobalamin biosynthesis protein CobS phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 34267 35382
ADX87783.1 HQ641346_p29 hypothetical protein phrog_18025 unknown function unknown function 1 28512 28763
ADX87782.1 HQ641346_p28 hypothetical protein phrog_14633 unknown function unknown function 1 27944 28174
ADX87790.1 HQ641346_p36 hypothetical protein phrog_18043 unknown function unknown function 1 32030 32206
ADX87789.1 HQ641346_p35 hypothetical protein phrog_17022 unknown function unknown function 1 31199 31957
ADX87762.1 HQ641346_p8 hypothetical protein phrog_8094 tail appendage tail -1 8547 10751
ADX87780.1 HQ641346_p26 hypothetical protein phrog_14737 unknown function unknown function 1 27251 27742
ADX87815.1 HQ641346_p61 hypothetical protein phrog_21384 unknown function unknown function 1 48066 48377
ADX87804.1 HQ641346_p50 hypothetical protein phrog_18273 unknown function unknown function 1 43051 43269
ADX87778.1 HQ641346_p24 hypothetical protein phrog_17587 tail fiber protein tail -1 23287 25212
ADX87788.1 HQ641346_p34 hypothetical protein phrog_17353 unknown function unknown function 1 30804 31172
ADX87800.1 HQ641346_p46 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40465 40974
ADX87803.1 HQ641346_p49 hypothetical protein phrog_19119 unknown function unknown function 1 42806 43048
ADX87795.1 HQ641346_p41 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 36254 37066
ADX87806.1 HQ641346_p52 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 43701 44552
ADX87784.1 HQ641346_p30 hypothetical protein phrog_17158 unknown function unknown function 1 28782 28970
ADX87765.1 HQ641346_p11 hypothetical protein phrog_4590 unknown function unknown function -1 11737 12024
ADX87768.1 HQ641346_p14 hypothetical protein phrog_18422 unknown function unknown function -1 14343 14852
ADX87816.1 HQ641346_p62 hypothetical protein phrog_19358 unknown function unknown function 1 48374 48622
ADX87798.1 HQ641346_p44 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 38009 39265
ADX87775.1 HQ641346_p21 hypothetical protein phrog_2432 unknown function unknown function -1 20787 21065
ADX87777.1 HQ641346_p23 hypothetical protein phrog_14064 tail fiber protein tail -1 22134 23276
ADX87810.1 HQ641346_p56 hypothetical protein phrog_19822 unknown function unknown function 1 45992 46234
ADX87786.1 HQ641346_p32 hypothetical protein phrog_16974 unknown function unknown function 1 29642 30139
ADX87771.1 HQ641346_p17 hypothetical protein phrog_8956 unknown function unknown function -1 16717 16956
ADX87761.1 HQ641346_p7 hypothetical protein phrog_1249 acetyltransferase other -1 8098 8550
ADX87809.1 HQ641346_p55 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 45303 45992
ADX87760.1 HQ641346_p6 hypothetical protein phrog_8168 unknown function unknown function -1 7650 8096
ADX87759.1 HQ641346_p5 hypothetical protein phrog_12003 internal virion protein head and packaging -1 3383 7633
ADX87799.1 HQ641346_p45 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 39266 41834
ADX87767.1 HQ641346_p13 hypothetical protein phrog_17462 unknown function unknown function -1 12630 14258
ADX87797.1 HQ641346_p43 hypothetical protein phrog_16700 unknown function unknown function 1 37593 38012
ADX87772.1 HQ641346_p18 hypothetical protein phrog_332 head-tail adaptor connector -1 16967 18712
ADX87805.1 HQ641346_p51 hypothetical protein phrog_16403 unknown function unknown function 1 43259 43699
ADX87812.1 HQ641346_p58 thymidine kinase phrog_592 thymidine kinase other 1 46569 47165
ADX87794.1 HQ641346_p40 hypothetical protein phrog_16777 unknown function unknown function 1 35675 35998
ADX87773.1 HQ641346_p19 hypothetical protein phrog_38 terminase large subunit head and packaging -1 18712 20238
ADX87756.1 HQ641346_p2 hypothetical protein phrog_16830 unknown function unknown function -1 544 873
ADX87785.1 HQ641346_p31 hypothetical protein phrog_18100 unknown function unknown function 1 29255 29587
ADX87796.1 HQ641346_p42 hypothetical protein phrog_18510 unknown function unknown function 1 37057 37590
ADX87811.1 HQ641346_p57 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 46231 46569
ADX87814.1 HQ641346_p60 hypothetical protein phrog_11040 unknown function unknown function 1 47848 48066
ADX87755.1 HQ641346_p1 hypothetical protein phrog_2452 unknown function unknown function 1 171 467
ADX87807.1 HQ641346_p53 hypothetical protein phrog_19549 unknown function unknown function 1 44585 44764
ADX87793.1 HQ641346_p39 hypothetical protein phrog_17083 unknown function unknown function 1 35392 35694