Genomic map of Mycobacterium phage Daisy (JF704095)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF704095
Definition
Mycobacterium phage Daisy, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
PVOG
Length
68245
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
102
%GC
67.56
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEJ94694.1 JF704095_p22 hypothetical protein phrog_6514 unknown function unknown function -1 17519 17629
AEJ94721.1 JF704095_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43289 44902
AEJ94674.1 JF704095_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
AEJ94773.1 JF704095_p63 hypothetical protein phrog_6656 unknown function unknown function -1 54721 54951
AEJ94772.1 JF704095_p102 hypothetical protein phrog_5930 unknown function unknown function 1 67894 68196
AEJ94697.1 JF704095_p25 hypothetical protein phrog_901 unknown function unknown function 1 19029 19400
AEJ94673.1 JF704095_p1 hypothetical protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
AEJ94688.1 JF704095_p16 hypothetical protein phrog_970 unknown function unknown function 1 13985 14590
AEJ94720.1 JF704095_p48 hypothetical protein phrog_870 unknown function unknown function -1 42694 43239
AEJ94711.1 JF704095_p39 hypothetical protein phrog_915 unknown function unknown function 1 36921 37289
AEJ94679.1 JF704095_p7 hypothetical protein phrog_6317 unknown function unknown function -1 4618 4869
AEJ94704.1 JF704095_p32 hypothetical protein phrog_356 minor tail protein tail 1 30867 32249
AEJ94763.1 JF704095_p93 hypothetical protein phrog_6114 unknown function unknown function -1 64107 64286
AEJ94751.1 JF704095_p81 hypothetical protein phrog_6304 unknown function unknown function -1 60925 61089
AEJ94699.1 JF704095_p27 hypothetical protein phrog_1118 tail assembly chaperone tail 1 19797 20390
AEJ94689.1 JF704095_p17 hypothetical protein phrog_565 holin lysis 1 14587 15021
AEJ94730.1 JF704095_p58 hypothetical protein phrog_6482 unknown function unknown function -1 53240 53515
AEJ94765.1 JF704095_p95 hypothetical protein phrog_1010 unknown function unknown function -1 64848 65336
AEJ94687.1 JF704095_p15 hypothetical protein phrog_779 unknown function unknown function 1 13161 13970
AEJ94774.1 JF704095_p62 hypothetical protein phrog_6735 unknown function unknown function -1 54565 54684
AEJ94739.1 JF704095_p69 hypothetical protein phrog_4938 unknown function unknown function 1 57321 57485
AEJ94755.1 JF704095_p85 hypothetical protein phrog_7541 unknown function unknown function -1 61757 62089
AEJ94709.1 JF704095_p37 hypothetical protein phrog_282 unknown function unknown function 1 34953 35552
AEJ94715.1 JF704095_p43 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38818 39054
AEJ94738.1 JF704095_p68 hypothetical protein phrog_6404 unknown function unknown function 1 57094 57324
AEJ94762.1 JF704095_p92 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 63727 64107
AEJ94676.1 JF704095_p4 PAPS reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
AEJ94680.1 JF704095_p8 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4866 5492
AEJ94737.1 JF704095_p67 hypothetical protein phrog_1016 unknown function unknown function 1 56849 57097
AEJ94754.1 JF704095_p84 hypothetical protein phrog_4392 unknown function unknown function -1 61404 61757
AEJ94757.1 JF704095_p87 hypothetical protein phrog_7490 unknown function unknown function -1 62370 62558
AEJ94695.1 JF704095_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 17760 18500
AEJ94701.1 JF704095_p29 hypothetical protein phrog_838 unknown function unknown function 1 26173 27603
AEJ94707.1 JF704095_p35 hypothetical protein phrog_948 unknown function unknown function 1 33867 34292
AEJ94684.1 JF704095_p12 portal protein phrog_859 portal protein head and packaging 1 8211 10658
AEJ94703.1 JF704095_p31 hypothetical protein phrog_746 minor tail protein tail 1 28640 30865
AEJ94724.1 JF704095_p52 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45485 47182
AEJ94683.1 JF704095_p11 hypothetical protein phrog_776 portal protein head and packaging 1 6317 8221
AEJ94756.1 JF704095_p86 hypothetical protein phrog_7414 unknown function unknown function -1 62086 62373
AEJ94752.1 JF704095_p82 hypothetical protein phrog_6460 unknown function unknown function -1 61086 61244
AEJ94691.1 JF704095_p19 hypothetical protein phrog_2344 unknown function unknown function 1 15482 15961
AEJ94742.1 JF704095_p72 hypothetical protein phrog_4885 unknown function unknown function 1 58496 58753
AEJ94705.1 JF704095_p33 hypothetical protein phrog_416 minor tail protein tail 1 32246 33448
AEJ94713.1 JF704095_p41 hypothetical protein phrog_892 tail fiber protein tail 1 37627 38037
AEJ94685.1 JF704095_p13 hypothetical protein phrog_25906 unknown function unknown function 1 10736 10867
AEJ94760.1 JF704095_p90 hypothetical protein phrog_6199 unknown function unknown function -1 63091 63450
AEJ94726.1 JF704095_p54 hypothetical protein phrog_3892 unknown function unknown function -1 47639 47986
AEJ94722.1 JF704095_p50 hypothetical protein phrog_7519 unknown function unknown function -1 44902 45123
AEJ94682.1 JF704095_p10 hypothetical protein phrog_781 unknown function unknown function 1 5952 6287
AEJ94675.1 JF704095_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1072
AEJ94725.1 JF704095_p53 hypothetical protein phrog_6400 unknown function unknown function -1 47277 47639
AEJ94686.1 JF704095_p14 capsid protein phrog_777 major head protein head and packaging 1 11047 13062
AEJ94731.1 JF704095_p59 hypothetical protein phrog_6936 unknown function unknown function -1 53512 53649
AEJ94741.1 JF704095_p71 hypothetical protein phrog_1031 unknown function unknown function 1 58086 58490
AEJ94693.1 JF704095_p21 major tail subunit phrog_792 major tail protein tail 1 16378 17457
AEJ94727.1 JF704095_p55 replicative helicase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 48025 50631
AEJ94749.1 JF704095_p79 hypothetical protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60508 60837
AEJ94759.1 JF704095_p89 hypothetical protein phrog_5355 unknown function unknown function -1 62861 63016
AEJ94681.1 JF704095_p9 hypothetical protein phrog_6276 unknown function unknown function -1 5551 5847
AEJ94677.1 JF704095_p5 hypothetical protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
AEJ94735.1 JF704095_p65 hypothetical protein phrog_982 unknown function unknown function -1 55375 55644
AEJ94690.1 JF704095_p18 hypothetical protein phrog_2272 unknown function unknown function 1 15024 15485
AEJ94770.1 JF704095_p100 hypothetical protein phrog_6097 unknown function unknown function 1 67447 67683
AEJ94723.1 JF704095_p51 hypothetical protein phrog_780 unknown function unknown function -1 45170 45439
AEJ94716.1 JF704095_p44 HTH DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39051 39536
AEJ94771.1 JF704095_p101 hypothetical protein phrog_6432 unknown function unknown function 1 67674 67829
AEJ94750.1 JF704095_p80 hypothetical protein phrog_4461 unknown function unknown function -1 60830 60928
AEJ94743.1 JF704095_p73 hypothetical protein phrog_1306 unknown function unknown function -1 58766 58936
AEJ94748.1 JF704095_p78 hypothetical protein phrog_6691 unknown function unknown function -1 60230 60511
AEJ94678.1 JF704095_p6 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2714 4477
AEJ94714.1 JF704095_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38037 38762
AEJ94769.1 JF704095_p99 hypothetical protein phrog_5733 unknown function unknown function 1 67196 67450
AEJ94718.1 JF704095_p46 lysin A phrog_700 endolysin lysis 1 40294 41559
AEJ94717.1 JF704095_p45 hypothetical protein phrog_636 unknown function unknown function -1 39533 40231
AEJ94692.1 JF704095_p20 hypothetical protein phrog_2525 unknown function unknown function 1 15958 16290
AEJ94728.1 JF704095_p56 hypothetical protein phrog_6342 unknown function unknown function -1 50665 51426
AEJ94700.1 JF704095_p28 tapemeasure protein phrog_934 tail length tape measure protein tail 1 20416 26163
AEJ94734.1 JF704095_p64 hypothetical protein phrog_6105 unknown function unknown function -1 54948 55298
AEJ94698.1 JF704095_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 19384 19797
AEJ94758.1 JF704095_p88 hypothetical protein phrog_2089 unknown function unknown function -1 62652 62846
AEJ94745.1 JF704095_p75 hypothetical protein phrog_6229 unknown function unknown function 1 59118 59465
AEJ94732.1 JF704095_p60 hypothetical protein phrog_3025 unknown function unknown function -1 53646 54092
AEJ94740.1 JF704095_p70 RNaseE phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57482 58081
AEJ94746.1 JF704095_p76 hypothetical protein phrog_928 unknown function unknown function 1 59447 59974
AEJ94696.1 JF704095_p24 hypothetical protein phrog_810 unknown function unknown function 1 18497 19018
AEJ94708.1 JF704095_p36 hypothetical protein phrog_282 unknown function unknown function 1 34303 34956
AEJ94766.1 JF704095_p96 hypothetical protein phrog_1221 unknown function unknown function -1 65410 66522
AEJ94719.1 JF704095_p47 lysin B phrog_102 endolysin lysis 1 41560 42624
AEJ94767.1 JF704095_p97 hypothetical protein phrog_2972 unknown function unknown function -1 66596 66832
AEJ94733.1 JF704095_p61 hypothetical protein phrog_993 unknown function unknown function -1 54089 54565
AEJ94729.1 JF704095_p57 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51423 53240
AEJ94764.1 JF704095_p94 hypothetical protein phrog_6469 unknown function unknown function -1 64283 64750
AEJ94736.1 JF704095_p66 hypothetical protein phrog_996 unknown function unknown function 1 56046 56813
AEJ94747.1 JF704095_p77 hypothetical protein phrog_4974 unknown function unknown function -1 59987 60175
AEJ94744.1 JF704095_p74 hypothetical protein phrog_6511 unknown function unknown function 1 58955 59107
AEJ94768.1 JF704095_p98 hypothetical protein phrog_4825 unknown function unknown function 1 67010 67183
AEJ94753.1 JF704095_p83 hypothetical protein phrog_6338 unknown function unknown function -1 61253 61411
AEJ94712.1 JF704095_p40 hypothetical protein phrog_941 unknown function unknown function 1 37373 37609
AEJ94706.1 JF704095_p34 hypothetical protein phrog_240 head protein head and packaging 1 33475 33858
AEJ94702.1 JF704095_p30 hypothetical protein phrog_837 minor tail protein tail 1 27600 28643
AEJ94710.1 JF704095_p38 hypothetical protein phrog_3329 unknown function unknown function 1 35549 36898
AEJ94761.1 JF704095_p91 hypothetical protein phrog_6428 unknown function unknown function -1 63515 63727