Genomic map of Mycobacterium phage Adephagia (JF704105)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF704105
Definition
Mycobacterium phage Adephagia, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
PVOG
Length
59646
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
66.6
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEJ95815.1 JF704105_p45 hypothetical protein phrog_2908 unknown function unknown function 1 35663 36013
AEJ95807.1 JF704105_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30542 31228
AEJ95841.1 JF704105_p71 hypothetical protein phrog_908 unknown function unknown function 1 48568 49755
AEJ95810.1 JF704105_p40 integrase phrog_1 integrase integration and excision 1 32476 33564
AEJ95825.1 JF704105_p55 hypothetical protein phrog_4832 unknown function unknown function 1 39774 39974
AEJ95814.1 JF704105_p44 hypothetical protein phrog_1840 excisionase integration and excision 1 35395 35661
AEJ95846.1 JF704105_p76 hypothetical protein phrog_5776 unknown function unknown function 1 51291 51419
AEJ95817.1 JF704105_p47 hypothetical protein phrog_3903 unknown function unknown function 1 36356 36568
AEJ95789.1 JF704105_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11232 12079
AEJ95844.1 JF704105_p74 SprT phrog_1006 unknown function unknown function 1 50343 50804
AEJ95809.1 JF704105_p39 hypothetical protein phrog_658 unknown function unknown function -1 31816 32118
AEJ95790.1 JF704105_p20 tapemeasure protein phrog_971 endolysin lysis 1 12079 15915
AEJ95773.1 JF704105_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
AEJ95782.1 JF704105_p12 major capsid protein phrog_10 major head protein head and packaging 1 7931 8869
AEJ95792.1 JF704105_p22 minor tail protein phrog_110 minor tail protein tail 1 17154 18920
AEJ95811.1 JF704105_p41 hypothetical protein phrog_950 unknown function unknown function -1 33669 34550
AEJ95774.1 JF704105_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 954
AEJ95778.1 JF704105_p8 portal protein phrog_104 portal protein head and packaging 1 3020 4579
AEJ95839.1 JF704105_p69 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47419 48117
AEJ95771.1 JF704105_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
AEJ95803.1 JF704105_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28121 28372
AEJ95779.1 JF704105_p9 hypothetical protein phrog_1752 head maturation protease head and packaging 1 4584 7094
AEJ95861.1 JF704105_p91 hypothetical protein phrog_4560 unknown function unknown function 1 58177 58446
AEJ95787.1 JF704105_p17 major tail subunit phrog_117 major tail protein tail 1 10504 11118
AEJ95791.1 JF704105_p21 hypothetical protein phrog_106 minor tail protein tail 1 16017 17153
AEJ95801.1 JF704105_p31 hypothetical protein phrog_565 holin lysis 1 27343 27783
AEJ95833.1 JF704105_p63 hypothetical protein singleton unknown function unknown function 1 42714 42896
AEJ95826.1 JF704105_p56 hypothetical protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39986 40540
AEJ95777.1 JF704105_p7 terminase phrog_2 terminase large subunit head and packaging 1 1587 3008
AEJ95818.1 JF704105_p48 hypothetical protein phrog_2286 unknown function unknown function 1 36565 37356
AEJ95776.1 JF704105_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1376 1603
AEJ95848.1 JF704105_p78 hypothetical protein phrog_3868 unknown function unknown function 1 52315 52791
AEJ95852.1 JF704105_p82 hypothetical protein phrog_6426 unknown function unknown function 1 53562 53714
AEJ95849.1 JF704105_p79 hypothetical protein phrog_5794 unknown function unknown function 1 52785 53066
AEJ95800.1 JF704105_p30 lysin B phrog_102 endolysin lysis 1 26460 27332
AEJ95819.1 JF704105_p49 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 37353 37616
AEJ95804.1 JF704105_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28359 29567
AEJ95831.1 JF704105_p61 hypothetical protein phrog_3492 unknown function unknown function 1 42168 42401
AEJ95862.1 JF704105_p92 hypothetical protein phrog_4561 unknown function unknown function 1 58879 59109
AEJ95788.1 JF704105_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11232 11669
AEJ95837.1 JF704105_p67 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43979 44350
AEJ95827.1 JF704105_p57 hypothetical protein phrog_2596 unknown function unknown function 1 40540 40806
AEJ95858.1 JF704105_p88 hypothetical protein phrog_5812 unknown function unknown function 1 56834 57463
AEJ95805.1 JF704105_p35 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29760 30191
AEJ95842.1 JF704105_p72 hypothetical protein phrog_4269 unknown function unknown function 1 49768 50001
AEJ95802.1 JF704105_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27786 28124
AEJ95799.1 JF704105_p29 lysin A phrog_1519 endolysin lysis 1 24808 26463
AEJ95847.1 JF704105_p77 hypothetical protein phrog_2342 unknown function unknown function 1 51416 52318
AEJ95824.1 JF704105_p54 hypothetical protein phrog_1956 unknown function unknown function 1 39499 39777
AEJ95781.1 JF704105_p11 hypothetical protein phrog_1793 head scaffolding protein head and packaging 1 7313 7855
AEJ95822.1 JF704105_p52 hypothetical protein phrog_301 secreted protein other 1 38768 39118
AEJ95794.1 JF704105_p24 minor tail subunit phrog_1565 minor tail protein tail 1 19480 20562
AEJ95780.1 JF704105_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7091 7276
AEJ95840.1 JF704105_p70 hypothetical protein phrog_3478 unknown function unknown function 1 48110 48571
AEJ95821.1 JF704105_p51 hypothetical protein phrog_542 unknown function unknown function 1 38566 38736
AEJ95808.1 JF704105_p38 hypothetical protein phrog_7081 unknown function unknown function 1 31344 31742
AEJ95864.1 JF704105_p94 HNH endonuclease domain protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59285 59587
AEJ95823.1 JF704105_p53 hypothetical protein phrog_3186 unknown function unknown function 1 39115 39498
AEJ95796.1 JF704105_p26 hypothetical protein phrog_346 minor tail protein tail 1 20878 23310
AEJ95860.1 JF704105_p90 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 57814 58029
AEJ95829.1 JF704105_p59 hypothetical protein phrog_1498 unknown function unknown function 1 41132 41296
AEJ95816.1 JF704105_p46 hypothetical protein phrog_2654 unknown function unknown function 1 36192 36359
AEJ95785.1 JF704105_p15 hypothetical protein phrog_387 neck protein connector 1 9701 9982
AEJ95806.1 JF704105_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30176 30466
AEJ95851.1 JF704105_p81 hypothetical protein phrog_666 unknown function unknown function 1 53368 53565
AEJ95834.1 JF704105_p64 hypothetical protein phrog_1911 unknown function unknown function 1 42893 43402
AEJ95783.1 JF704105_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8981 9367
AEJ95832.1 JF704105_p62 hypothetical protein phrog_1581 unknown function unknown function 1 42477 42692
AEJ95784.1 JF704105_p14 hypothetical protein phrog_763 head-tail adaptor connector 1 9364 9720
AEJ95793.1 JF704105_p23 hypothetical protein phrog_1697 minor tail protein tail 1 18920 19396
AEJ95812.1 JF704105_p42 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 34598 34978
AEJ95797.1 JF704105_p27 hypothetical protein phrog_416 minor tail protein tail 1 23322 24335
AEJ95854.1 JF704105_p84 hypothetical protein phrog_3167 unknown function unknown function 1 55016 55402
AEJ95795.1 JF704105_p25 hypothetical protein phrog_1736 minor tail protein tail 1 20569 20877
AEJ95830.1 JF704105_p60 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41293 42171
AEJ95845.1 JF704105_p75 hypothetical protein phrog_2974 unknown function unknown function 1 50929 51204
AEJ95850.1 JF704105_p80 hypothetical protein phrog_5288 unknown function unknown function 1 53066 53368
AEJ95836.1 JF704105_p66 hypothetical protein phrog_3641 unknown function unknown function 1 43743 43982
AEJ95853.1 JF704105_p83 RNA terminal phosphate cyclase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 53826 55019
AEJ95775.1 JF704105_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1180 1383
AEJ95863.1 JF704105_p93 hypothetical protein phrog_5633 unknown function unknown function 1 59103 59288
AEJ95772.1 JF704105_p2 hypothetical protein phrog_5284 unknown function unknown function 1 294 479
AEJ95855.1 JF704105_p85 hypothetical protein phrog_2822 unknown function unknown function 1 55402 55941
AEJ95859.1 JF704105_p89 hypothetical protein phrog_5243 unknown function unknown function 1 57495 57692
AEJ95843.1 JF704105_p73 hypothetical protein phrog_1338 unknown function unknown function 1 49998 50270
AEJ95828.1 JF704105_p58 hypothetical protein phrog_2870 unknown function unknown function 1 40803 41135
AEJ95835.1 JF704105_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43504 43746
AEJ95838.1 JF704105_p68 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44392 47010
AEJ95798.1 JF704105_p28 hypothetical protein phrog_240 head protein head and packaging 1 24419 24790
AEJ95786.1 JF704105_p16 hypothetical protein phrog_123 tail terminator connector 1 9979 10404
AEJ95857.1 JF704105_p87 hypothetical protein phrog_3665 unknown function unknown function 1 56500 56661
AEJ95856.1 JF704105_p86 hypothetical protein phrog_2493 unknown function unknown function 1 55949 56503
AEJ95813.1 JF704105_p43 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 35138 35398
AEJ95820.1 JF704105_p50 hypothetical protein phrog_2781 unknown function unknown function 1 37613 38554