Genomic map of Mycobacterium virus Packman (JF704110)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF704110
Definition
Mycobacterium virus PackMan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
PVOG
Length
51339
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
62.57
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEK07295.1 JF704110_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 15076 15465
AEK07323.1 JF704110_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33631 35670
AEK07306.1 JF704110_p32 hypothetical protein phrog_737 minor tail protein tail 1 24377 26143
AEK07343.1 JF704110_p70 hypothetical protein phrog_9978 unknown function unknown function -1 42129 42293
AEK07337.1 JF704110_p64 hypothetical protein phrog_1498 unknown function unknown function -1 40146 40295
AEK07287.1 JF704110_p13 portal protein phrog_104 portal protein head and packaging 1 9893 11380
AEK07354.1 JF704110_p81 hypothetical protein phrog_1342 unknown function unknown function -1 46011 46238
AEK07352.1 JF704110_p79 hypothetical protein phrog_3963 unknown function unknown function -1 45488 45778
AEK07349.1 JF704110_p76 hypothetical protein phrog_1173 unknown function unknown function -1 44892 45056
AEK07283.1 JF704110_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6006 6146
AEK07288.1 JF704110_p14 hypothetical protein phrog_193 head maturation protease head and packaging 1 11377 12237
AEK07304.1 JF704110_p30 hypothetical protein phrog_352 minor tail protein tail 1 23557 24006
AEK07300.1 JF704110_p26 tapemeasure phrog_305 tail length tape measure protein tail 1 17590 20499
AEK07359.1 JF704110_p86 hypothetical protein phrog_10931 unknown function unknown function -1 47498 47632
AEK07353.1 JF704110_p80 hypothetical protein phrog_8086 unknown function unknown function -1 45778 46014
AEK07285.1 JF704110_p11 holin phrog_526 holin lysis 1 7723 8109
AEK07346.1 JF704110_p73 repressor phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42829 43671
AEK07342.1 JF704110_p69 helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41319 42128
AEK07311.1 JF704110_p37 hypothetical protein phrog_10331 DNA binding protein DNA, RNA and nucleotide metabolism -1 28197 28511
AEK07364.1 JF704110_p91 hypothetical protein phrog_1392 unknown function unknown function -1 48530 49240
AEK07312.1 JF704110_p38 hypothetical protein phrog_10689 unknown function unknown function -1 28492 28704
AEK07327.1 JF704110_p53 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36242 36907
AEK07325.1 JF704110_p51 hypothetical protein phrog_499 unknown function unknown function -1 35845 36108
AEK07347.1 JF704110_p74 hypothetical protein phrog_1562 unknown function unknown function -1 43668 44087
AEK07340.1 JF704110_p67 hypothetical protein phrog_542 unknown function unknown function -1 40769 40924
AEK07310.1 JF704110_p36 hypothetical protein phrog_2697 unknown function unknown function -1 28000 28200
AEK07303.1 JF704110_p29 hypothetical protein phrog_110 minor tail protein tail 1 21746 23539
AEK07341.1 JF704110_p68 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40921 41307
AEK07297.1 JF704110_p23 hypothetical protein phrog_117 major tail protein tail 1 15900 16496
AEK07305.1 JF704110_p31 hypothetical protein phrog_404 minor tail protein tail 1 24008 24376
AEK07319.1 JF704110_p45 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31783 32109
AEK07280.1 JF704110_p6 hypothetical protein phrog_1260 minor tail protein tail 1 3230 4192
AEK07313.1 JF704110_p39 hypothetical protein phrog_9466 unknown function unknown function -1 28692 28895
AEK07314.1 JF704110_p40 hypothetical protein phrog_383 unknown function unknown function -1 28892 29263
AEK07361.1 JF704110_p88 hypothetical protein phrog_10771 unknown function unknown function -1 47799 48170
AEK07294.1 JF704110_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14708 15076
AEK07286.1 JF704110_p12 terminase phrog_9 terminase large subunit head and packaging 1 8109 9896
AEK07278.1 JF704110_p3 hypothetical protein phrog_10336 unknown function unknown function 1 2111 2338
AEK07344.1 JF704110_p71 hypothetical protein phrog_520 unknown function unknown function -1 42290 42568
AEK07334.1 JF704110_p61 primase phrog_17507 endonuclease VII DNA, RNA and nucleotide metabolism -1 39448 39645
AEK07330.1 JF704110_p56 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37953 38225
AEK07291.1 JF704110_p17 hypothetical protein phrog_3101 unknown function unknown function 1 13889 14137
AEK07355.1 JF704110_p82 hypothetical protein phrog_1008 DNA methyltransferase other -1 46258 46722
AEK07281.1 JF704110_p7 hypothetical protein phrog_819 tail protein tail 1 4192 5235
AEK07328.1 JF704110_p54 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36911 37681
AEK07293.1 JF704110_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 14514 14711
AEK07302.1 JF704110_p28 hypothetical protein phrog_1543 minor tail protein tail 1 21537 21749
AEK07365.1 JF704110_p92 hypothetical protein phrog_2499 unknown function unknown function -1 49242 49436
AEK07279.1 JF704110_p5 hypothetical protein phrog_226 minor tail protein tail 1 2669 3142
AEK07360.1 JF704110_p87 hypothetical protein phrog_519 unknown function unknown function -1 47629 47802
AEK07336.1 JF704110_p63 hypothetical protein phrog_18212 unknown function unknown function -1 40009 40146
AEK07322.1 JF704110_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33104 33634
AEK07318.1 JF704110_p44 hypothetical protein phrog_4326 unknown function unknown function -1 31487 31783
AEK07320.1 JF704110_p46 hypothetical protein phrog_690 unknown function unknown function -1 32106 32318
AEK07309.1 JF704110_p35 hypothetical protein phrog_2639 Arc-like repressor transcription regulation 1 27587 27856
AEK07316.1 JF704110_p42 hypothetical protein phrog_896 unknown function unknown function -1 29420 29611
AEK07284.1 JF704110_p10 lysin A phrog_317 endolysin lysis 1 6146 7726
AEK07299.1 JF704110_p24 hypothetical protein phrog_393 tail assembly chaperone tail 1 16614 17461
AEK07338.1 JF704110_p65 hypothetical protein phrog_8981 unknown function unknown function -1 40280 40456
AEK07298.1 JF704110_p25 hypothetical protein phrog_330 tail assembly chaperone tail 1 16614 17009
AEK07317.1 JF704110_p43 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29690 31483
AEK07335.1 JF704110_p62 hypothetical protein phrog_9791 unknown function unknown function -1 39857 40012
AEK07321.1 JF704110_p47 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32320 33024
AEK07362.1 JF704110_p89 hypothetical protein phrog_3831 unknown function unknown function -1 48173 48403
AEK07290.1 JF704110_p16 capsid protein phrog_10 major head protein head and packaging 1 12848 13807
AEK07308.1 JF704110_p34 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 27013 27594
AEK07296.1 JF704110_p22 hypothetical protein phrog_123 tail terminator connector 1 15462 15884
AEK07276.1 JF704110_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 379 1161
AEK07307.1 JF704110_p33 hypothetical protein phrog_2570 unknown function unknown function 1 26209 26403
AEK07367.1 JF704110_p4 hypothetical protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2335 2628
AEK07366.1 JF704110_p93 hypothetical protein phrog_1676 unknown function unknown function -1 49566 49862
AEK07331.1 JF704110_p57 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38225 38686
AEK07363.1 JF704110_p90 hypothetical protein phrog_2124 unknown function unknown function -1 48393 48521
AEK07350.1 JF704110_p77 hypothetical protein phrog_7865 unknown function unknown function -1 45087 45257
AEK07315.1 JF704110_p41 hypothetical protein phrog_7968 unknown function unknown function -1 29256 29420
AEK07324.1 JF704110_p50 hypothetical protein phrog_2046 unknown function unknown function -1 35670 35873
AEK07368.1 JF704110_p58 primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38688 39071
AEK07301.1 JF704110_p27 hypothetical protein phrog_106 minor tail protein tail 1 20527 21540
AEK07333.1 JF704110_p60 hypothetical protein phrog_4886 unknown function unknown function -1 39272 39451
AEK07326.1 JF704110_p52 hypothetical protein phrog_10515 unknown function unknown function -1 36105 36245
AEK07277.1 JF704110_p2 hypothetical protein phrog_5234 unknown function unknown function 1 1359 2114
AEK07356.1 JF704110_p83 hypothetical protein phrog_855 unknown function unknown function -1 46725 46868
AEK07289.1 JF704110_p15 scaffold protein phrog_233 head scaffolding protein head and packaging 1 12267 12800
AEK07332.1 JF704110_p59 hypothetical protein phrog_10806 unknown function unknown function -1 39061 39279
AEK07357.1 JF704110_p84 hypothetical protein phrog_3718 unknown function unknown function -1 46865 47110
AEK07345.1 JF704110_p72 hypothetical protein phrog_642 unknown function unknown function -1 42580 42798
AEK07351.1 JF704110_p78 hypothetical protein phrog_5531 unknown function unknown function -1 45267 45485
AEK07282.1 JF704110_p8 hypothetical protein phrog_356 minor tail protein tail 1 5239 5868
AEK07348.1 JF704110_p75 repressor phrog_357 transcriptional repressor transcription regulation -1 44108 44656
AEK07339.1 JF704110_p66 hypothetical protein phrog_397 unknown function unknown function -1 40453 40602
AEK07292.1 JF704110_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 14140 14517
AEK07358.1 JF704110_p85 hypothetical protein phrog_586 unknown function unknown function -1 47134 47487
AEK07329.1 JF704110_p55 hypothetical protein phrog_474 phosphofructokinase other -1 37678 37956