Genomic map of Clostridium phage phiCP9O (JF767210)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF767210
Definition
Clostridium phage phi9O, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
39594
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
30.19
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEI74545.1 JF767210_p12 hypothetical protein phrog_23208 virion structural protein head and packaging 1 13012 13998
AEI74556.1 JF767210_p23 small integral membrane protein phrog_297 holin lysis 1 25690 25917
AEI74547.1 JF767210_p14 hypothetical protein phrog_17977 unknown function unknown function 1 14464 14799
AEI74551.1 JF767210_p18 phage tail tape measure protein phrog_991 tail length tape measure protein tail 1 16479 18821
AEI74573.1 JF767210_p40 ERF superfamily protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 33120 33710
AEI74549.1 JF767210_p16 hypothetical protein phrog_885 major tail protein tail 1 15213 15812
AEI74550.1 JF767210_p17 hypothetical protein phrog_18646 unknown function unknown function 1 15826 16173
AEI74580.1 JF767210_p47 hypothetical protein phrog_2245 nucleoside triphosphate pyrophosphohydrolase other 1 38153 38482
AEI74568.1 JF767210_p35 uncharacterized phage-encoded protein phrog_63 anti-repressor Ant transcription regulation 1 30067 30813
AEI74564.1 JF767210_p31 hypothetical protein phrog_27146 unknown function unknown function 1 28698 28892
AEI74548.1 JF767210_p15 hypothetical protein phrog_17405 head protein head and packaging 1 14836 15201
AEI74566.1 JF767210_p33 hypothetical protein phrog_17646 unknown function unknown function 1 29478 29699
AEI74555.1 JF767210_p22 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 25040 25678
AEI74558.1 JF767210_p25 phage anti-repressor protein phrog_14211 anti-repressor transcription regulation 1 26931 27635
AEI74539.1 JF767210_p6 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5324 5947
AEI74571.1 JF767210_p38 hypothetical protein phrog_19908 unknown function unknown function 1 31695 31826
AEI74581.1 JF767210_p48 hypothetical protein phrog_18244 unknown function unknown function 1 38483 38698
AEI74569.1 JF767210_p36 hypothetical protein phrog_17454 unknown function unknown function 1 30882 31118
AEI74567.1 JF767210_p34 hypothetical protein phrog_18552 unknown function unknown function 1 29814 30065
AEI74570.1 JF767210_p37 hypothetical protein phrog_17879 unknown function unknown function 1 31111 31638
AEI74560.1 JF767210_p27 hypothetical protein phrog_17736 unknown function unknown function 1 27889 28131
AEI74535.1 JF767210_p2 phage terminase large subunit phrog_18557 terminase large subunit head and packaging 1 1409 1675
AEI74576.1 JF767210_p43 predicted alternative thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 34439 35101
AEI74563.1 JF767210_p30 hypothetical protein phrog_18689 unknown function unknown function 1 28436 28696
AEI74542.1 JF767210_p9 predicted P-loop ATPase phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 7196 8455
AEI74557.1 JF767210_p24 hypothetical protein phrog_1193 hemolysin other 1 25918 26178
AEI74565.1 JF767210_p32 hypothetical protein phrog_18566 unknown function unknown function 1 29347 29472
AEI74546.1 JF767210_p13 hypothetical protein phrog_1236 head protein head and packaging 1 14000 14470
AEI74540.1 JF767210_p7 hypothetical protein phrog_16552 unknown function unknown function -1 6804 6929
AEI74537.1 JF767210_p4 phage portal protein SPP1 phrog_64 portal protein head and packaging 1 2060 3415
AEI74536.1 JF767210_p3 protein of unknown function DUF3310 phrog_5839 unknown function unknown function 1 1687 2058
AEI74538.1 JF767210_p5 hypothetical protein phrog_419 unknown function unknown function 1 3454 3717
AEI74544.1 JF767210_p11 P22 coat protein phrog_267 major head protein head and packaging 1 10130 10960
AEI74541.1 JF767210_p8 hypothetical protein phrog_16621 unknown function unknown function 1 7054 7182
AEI74572.1 JF767210_p39 hypothetical protein phrog_18368 unknown function unknown function 1 32352 32570
AEI74582.1 JF767210_p49 hypothetical protein phrog_17705 unknown function unknown function 1 38984 39592
AEI74552.1 JF767210_p19 prophage antirepressor phrog_463 anti-repressor transcription regulation 1 18906 19577
AEI74579.1 JF767210_p46 CHC2 zinc finger protein phrog_18098 unknown function unknown function 1 36243 37211
AEI74562.1 JF767210_p29 hypothetical protein phrog_9584 unknown function unknown function 1 28297 28443
AEI74578.1 JF767210_p45 hypothetical protein phrog_27657 unknown function unknown function 1 35602 35847
AEI74553.1 JF767210_p20 phage tail component phrog_33 distal tail protein Dit tail 1 19635 20330
AEI74534.1 JF767210_p1 hypothetical protein phrog_606 terminase small subunit head and packaging 1 79 426
AEI74577.1 JF767210_p44 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 35219 35590
AEI74559.1 JF767210_p26 hypothetical protein phrog_19685 unknown function unknown function 1 27732 27905
AEI74554.1 JF767210_p21 predicted hydrolase phrog_7043 tail protein tail 1 22091 23155
AEI74575.1 JF767210_p42 hypothetical protein phrog_16715 unknown function unknown function 1 34272 34439
AEI74561.1 JF767210_p28 hypothetical protein phrog_17096 unknown function unknown function 1 28134 28307
AEI74574.1 JF767210_p41 hypothetical protein phrog_3490 ERCC4-type nuclease DNA, RNA and nucleotide metabolism 1 33710 34279
AEI74543.1 JF767210_p10 phage minor structural protein GP20 phrog_194 head scaffolding protein head and packaging 1 9517 10107