Genomic map of Liberibacter phage FP2 (JF773396)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF773396
Definition
Liberibacter phage FP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
PVOG
Length
38552
Host Name
Candidatus Liberibacter asiaticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
39.27
Number of singletons
1
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEL31345.1 JF773396_p2 DNA ligase phrog_18456 DNA ligase DNA, RNA and nucleotide metabolism 1 701 1060
AEL31381.1 JF773396_p38 hypothetical protein phrog_9679 unknown function unknown function 1 31846 32217
AEL31356.1 JF773396_p13 phage-related protein phrog_684 virion structural protein head and packaging -1 6954 9383
AEL31372.1 JF773396_p29 phage-related protein singleton unknown function unknown function 1 26593 26745
AEL31358.1 JF773396_p15 phage-related protein phrog_992 head protein head and packaging -1 10590 12851
AEL31380.1 JF773396_p37 hypothetical protein phrog_22702 unknown function unknown function -1 31376 31639
AEL31346.1 JF773396_p3 guanylate kinase phrog_1815 guanylate kinase other 1 1062 1634
AEL31352.1 JF773396_p9 hypothetical protein phrog_26356 unknown function unknown function 1 4229 5173
AEL31382.1 JF773396_p39 hypothetical protein phrog_16052 unknown function unknown function 1 32307 32630
AEL31361.1 JF773396_p18 phage-related protein phrog_376 tail protein tail -1 15089 16861
AEL31369.1 JF773396_p26 transcriptional regulator, XRE family phrog_8 transcriptional regulator transcription regulation -1 24981 25580
AEL31384.1 JF773396_p41 Bro-N family phage antirepressor phrog_130 anti-repressor Ant transcription regulation 1 34095 34883
AEL31368.1 JF773396_p25 phage terminase small subunit phrog_1482 terminase small subunit head and packaging -1 23141 23629
AEL31370.1 JF773396_p27 hypothetical protein phrog_17944 unknown function unknown function 1 25761 25982
AEL31353.1 JF773396_p10 hypothetical protein phrog_6637 unknown function unknown function -1 5194 5670
AEL31355.1 JF773396_p12 hypothetical protein phrog_15612 unknown function unknown function -1 5932 6957
AEL31357.1 JF773396_p14 hypothetical protein phrog_14422 unknown function unknown function -1 9380 10606
AEL31379.1 JF773396_p36 hypothetical protein phrog_16809 unknown function unknown function -1 31173 31379
AEL31374.1 JF773396_p31 phage-related protein phrog_5070 unknown function unknown function 1 27035 27439
AEL31388.1 JF773396_p45 SNF2-related protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 37875 38552
AEL31386.1 JF773396_p43 DNA polymerase from bacteriophage origin phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 35555 37582
AEL31360.1 JF773396_p17 exonuclease phrog_21225 exonuclease DNA, RNA and nucleotide metabolism -1 13343 15082
AEL31387.1 JF773396_p44 VRR-NUC domain-containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 37579 37890
AEL31344.1 JF773396_p1 SNF2-related protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 1 708
AEL31347.1 JF773396_p4 hypothetical protein phrog_20262 unknown function unknown function 1 1706 2146
AEL31348.1 JF773396_p5 side tail fiber protein phrog_6320 tail fiber protein tail 1 2357 2863
AEL31354.1 JF773396_p11 hypothetical protein phrog_12290 unknown function unknown function -1 5667 5939
AEL31362.1 JF773396_p19 phage-related protein phrog_394 tail protein tail -1 16854 17372
AEL31359.1 JF773396_p16 integrase phrog_18250 integrase integration and excision -1 12853 13341
AEL31350.1 JF773396_p7 hypothetical protein phrog_12290 unknown function unknown function -1 3389 3661
AEL31365.1 JF773396_p22 hypothetical protein phrog_14772 unknown function unknown function -1 19165 19437
AEL31366.1 JF773396_p23 phage-related head-to-tail joining protein phrog_332 head-tail adaptor connector -1 19434 21053
AEL31377.1 JF773396_p34 phage-associated primase/P4 family phage/plasmid primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 28393 30765
AEL31373.1 JF773396_p30 phage-related protein phrog_21367 unknown function unknown function 1 26791 27003
AEL31351.1 JF773396_p8 hypothetical protein phrog_27382 unknown function unknown function -1 3749 3904
AEL31385.1 JF773396_p42 phage-related protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34901 35551
AEL31378.1 JF773396_p35 hypothetical protein phrog_17714 unknown function unknown function -1 30766 31155
AEL31349.1 JF773396_p6 phage-related protein phrog_6637 unknown function unknown function -1 2919 3392
AEL31376.1 JF773396_p33 hypothetical protein phrog_9415 unknown function unknown function -1 27968 28345
AEL31371.1 JF773396_p28 hypothetical protein phrog_9679 unknown function unknown function 1 26065 26457
AEL31383.1 JF773396_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 32758 33924
AEL31364.1 JF773396_p21 cell wall-binding repeat-containing protein phrog_18242 protease other -1 18413 19153
AEL31363.1 JF773396_p20 phage major capsid protein phrog_3437 major head protein head and packaging -1 17369 18400
AEL31375.1 JF773396_p32 prophage antirepressor phrog_18707 anti-repressor transcription regulation 1 27552 27737
AEL31367.1 JF773396_p24 phage terminase large subunit phrog_2 terminase large subunit head and packaging -1 21056 22606