| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JF937093 |
Definition |
Mycobacterium virus DLane, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
PVOG |
Length |
58899 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
61.88 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEK08571.1 | JF937093_p27 | hypothetical protein | phrog_28345 | unknown function | unknown function | -1 | 25747 | 25860 |
| AEK08613.1 | JF937093_p69 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 44902 | 45024 |
| AEK08642.1 | JF937093_p98 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54578 | 54988 |
| AEK08626.1 | JF937093_p82 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 50043 | 50318 |
| AEK08615.1 | JF937093_p71 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 46327 | 46461 |
| AEK08569.1 | JF937093_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25084 | 25281 |
| AEK08592.1 | JF937093_p48 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 36148 | 36381 |
| AEK08555.1 | JF937093_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7630 | 8439 |
| AEK08622.1 | JF937093_p78 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 48965 | 49144 |
| AEK08552.1 | JF937093_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6447 | 6779 |
| AEK08556.1 | JF937093_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8576 | 9127 |
| AEK08636.1 | JF937093_p92 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 52763 | 53032 |
| AEK08554.1 | JF937093_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7098 | 7505 |
| AEK08633.1 | JF937093_p89 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 51979 | 52317 |
| AEK08604.1 | JF937093_p60 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40555 | 40917 |
| AEK08572.1 | JF937093_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25876 | 26028 |
| AEK08600.1 | JF937093_p56 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 39362 | 39517 |
| AEK08578.1 | JF937093_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29123 | 29356 |
| AEK08589.1 | JF937093_p45 | hypothetical protein | phrog_28156 | unknown function | unknown function | 1 | 35186 | 35656 |
| AEK08551.1 | JF937093_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5884 | 6450 |
| AEK08570.1 | JF937093_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25430 | 25726 |
| AEK08617.1 | JF937093_p73 | hypothetical protein | phrog_11384 | unknown function | unknown function | 1 | 47455 | 47742 |
| AEK08550.1 | JF937093_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5063 | 5884 |
| AEK08559.1 | JF937093_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 13014 | 14723 |
| AEK08596.1 | JF937093_p52 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37767 | 38102 |
| AEK08629.1 | JF937093_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 51113 | 51376 |
| AEK08618.1 | JF937093_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47739 | 47939 |
| AEK08639.1 | JF937093_p95 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 54001 | 54168 |
| AEK08567.1 | JF937093_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23619 | 24257 |
| AEK08583.1 | JF937093_p39 | hypothetical protein | phrog_22818 | unknown function | unknown function | -1 | 31113 | 31661 |
| AEK08609.1 | JF937093_p65 | methylase | phrog_116 | DNA methyltransferase | other | 1 | 42636 | 44030 |
| AEK08632.1 | JF937093_p88 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 51845 | 51982 |
| AEK08546.1 | JF937093_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| AEK08577.1 | JF937093_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28724 | 29098 |
| AEK08644.1 | JF937093_p100 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55223 | 55384 |
| AEK08603.1 | JF937093_p59 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39980 | 40558 |
| AEK08576.1 | JF937093_p32 | holin | phrog_443 | holin | lysis | 1 | 28494 | 28727 |
| AEK08574.1 | JF937093_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26332 | 27486 |
| AEK08585.1 | JF937093_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 32255 | 33373 |
| AEK08610.1 | JF937093_p66 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 43999 | 44160 |
| AEK08601.1 | JF937093_p57 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39514 | 39744 |
| AEK08625.1 | JF937093_p81 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 49861 | 50046 |
| AEK08628.1 | JF937093_p84 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 50726 | 51097 |
| AEK08631.1 | JF937093_p87 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51666 | 51845 |
| AEK08587.1 | JF937093_p43 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 34160 | 34828 |
| AEK08608.1 | JF937093_p64 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 42163 | 42639 |
| AEK08638.1 | JF937093_p94 | MerR | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 53780 | 54004 |
| AEK08566.1 | JF937093_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23351 | 23605 |
| AEK08649.1 | JF937093_p105 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58431 | 58757 |
| AEK08594.1 | JF937093_p50 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 37297 | 37578 |
| AEK08561.1 | JF937093_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16559 | 17389 |
| AEK08590.1 | JF937093_p46 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 35745 | 36005 |
| AEK08581.1 | JF937093_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30462 | 30554 |
| AEK08634.1 | JF937093_p90 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 52370 | 52540 |
| AEK08560.1 | JF937093_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 14795 | 16504 |
| AEK08630.1 | JF937093_p86 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 51373 | 51669 |
| AEK08620.1 | JF937093_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48532 | 48786 |
| AEK08640.1 | JF937093_p96 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 54175 | 54384 |
| AEK08588.1 | JF937093_p44 | DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34896 | 35129 |
| AEK08614.1 | JF937093_p70 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 45071 | 46330 |
| AEK08611.1 | JF937093_p67 | hypothetical protein | phrog_8485 | unknown function | unknown function | -1 | 44153 | 44530 |
| AEK08607.1 | JF937093_p63 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 42015 | 42170 |
| AEK08549.1 | JF937093_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4451 | 5044 |
| AEK08579.1 | JF937093_p35 | DnaQ | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29343 | 30164 |
| AEK08553.1 | JF937093_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6782 | 7111 |
| AEK08573.1 | JF937093_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26102 | 26335 |
| AEK08616.1 | JF937093_p72 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 46465 | 47316 |
| AEK08597.1 | JF937093_p53 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 38102 | 38503 |
| AEK08568.1 | JF937093_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24254 | 25078 |
| AEK08646.1 | JF937093_p102 | serine/threonine kinase | phrog_3297 | kinase | other | 1 | 57129 | 57602 |
| AEK08545.1 | JF937093_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| AEK08643.1 | JF937093_p99 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 54988 | 55230 |
| AEK08547.1 | JF937093_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| AEK08637.1 | JF937093_p93 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53029 | 53670 |
| AEK08564.1 | JF937093_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21809 | 22969 |
| AEK08599.1 | JF937093_p55 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38997 | 39362 |
| AEK08623.1 | JF937093_p79 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 49141 | 49515 |
| AEK08557.1 | JF937093_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8576 | 9512 |
| AEK08635.1 | JF937093_p91 | hypothetical protein | phrog_22980 | unknown function | unknown function | 1 | 52528 | 52770 |
| AEK08647.1 | JF937093_p103 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57605 | 57811 |
| AEK08598.1 | JF937093_p54 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 38500 | 39000 |
| AEK08612.1 | JF937093_p68 | hypothetical protein | phrog_8611 | unknown function | unknown function | -1 | 44537 | 44869 |
| AEK08580.1 | JF937093_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30248 | 30469 |
| AEK08562.1 | JF937093_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17386 | 19923 |
| AEK08584.1 | JF937093_p40 | hypothetical protein | phrog_14103 | unknown function | unknown function | -1 | 31658 | 31900 |
| AEK08563.1 | JF937093_p19 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19920 | 21806 |
| AEK08591.1 | JF937093_p47 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 36002 | 36151 |
| AEK08558.1 | JF937093_p14 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9531 | 13013 |
| AEK08565.1 | JF937093_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22987 | 23328 |
| AEK08621.1 | JF937093_p77 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 48795 | 48968 |
| AEK08586.1 | JF937093_p42 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33439 | 33927 |
| AEK08605.1 | JF937093_p61 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 40914 | 41870 |
| AEK08602.1 | JF937093_p58 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 39732 | 39983 |
| AEK08593.1 | JF937093_p49 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 36378 | 37049 |
| AEK08648.1 | JF937093_p104 | glycosyl transferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57808 | 58431 |
| AEK08645.1 | JF937093_p101 | glycosyl transferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55690 | 57126 |
| AEK08548.1 | JF937093_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| AEK08575.1 | JF937093_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27486 | 28484 |
| AEK08641.1 | JF937093_p97 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54384 | 54581 |
| AEK08582.1 | JF937093_p38 | hypothetical protein | phrog_357 | transcriptional repressor | transcription regulation | -1 | 30604 | 31116 |
| AEK08595.1 | JF937093_p51 | hypothetical protein | phrog_7605 | unknown function | unknown function | 1 | 37575 | 37763 |
| AEK08619.1 | JF937093_p75 | hypothetical protein | phrog_2582 | unknown function | unknown function | 1 | 48080 | 48433 |
| AEK08624.1 | JF937093_p80 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 49512 | 49868 |
| AEK08627.1 | JF937093_p83 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50315 | 50599 |
| AEK08606.1 | JF937093_p62 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 41867 | 42037 |