Genomic map of Mycobacterium virus Dlane (JF937093)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF937093
Definition
Mycobacterium virus DLane, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
PVOG
Length
58899
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.88
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEK08571.1 JF937093_p27 hypothetical protein phrog_28345 unknown function unknown function -1 25747 25860
AEK08613.1 JF937093_p69 hypothetical protein phrog_2001 unknown function unknown function 1 44902 45024
AEK08642.1 JF937093_p98 hypothetical protein phrog_1186 unknown function unknown function 1 54578 54988
AEK08626.1 JF937093_p82 hypothetical protein phrog_722 unknown function unknown function 1 50043 50318
AEK08615.1 JF937093_p71 hypothetical protein phrog_2451 unknown function unknown function 1 46327 46461
AEK08569.1 JF937093_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25084 25281
AEK08592.1 JF937093_p48 hypothetical protein phrog_780 unknown function unknown function 1 36148 36381
AEK08555.1 JF937093_p11 major tail subunit phrog_476 major tail protein tail 1 7630 8439
AEK08622.1 JF937093_p78 hypothetical protein phrog_1943 unknown function unknown function 1 48965 49144
AEK08552.1 JF937093_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6447 6779
AEK08556.1 JF937093_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8576 9127
AEK08636.1 JF937093_p92 hypothetical protein phrog_2247 unknown function unknown function 1 52763 53032
AEK08554.1 JF937093_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7098 7505
AEK08633.1 JF937093_p89 hypothetical protein phrog_7643 unknown function unknown function 1 51979 52317
AEK08604.1 JF937093_p60 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40555 40917
AEK08572.1 JF937093_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25876 26028
AEK08600.1 JF937093_p56 hypothetical protein phrog_2078 unknown function unknown function 1 39362 39517
AEK08578.1 JF937093_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29123 29356
AEK08589.1 JF937093_p45 hypothetical protein phrog_28156 unknown function unknown function 1 35186 35656
AEK08551.1 JF937093_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5884 6450
AEK08570.1 JF937093_p26 hypothetical protein phrog_411 unknown function unknown function 1 25430 25726
AEK08617.1 JF937093_p73 hypothetical protein phrog_11384 unknown function unknown function 1 47455 47742
AEK08550.1 JF937093_p6 major capsid protein phrog_267 major head protein head and packaging 1 5063 5884
AEK08559.1 JF937093_p15 hypothetical protein phrog_106 minor tail protein tail 1 13014 14723
AEK08596.1 JF937093_p52 hypothetical protein phrog_658 unknown function unknown function 1 37767 38102
AEK08629.1 JF937093_p85 hypothetical protein phrog_1901 unknown function unknown function 1 51113 51376
AEK08618.1 JF937093_p74 hypothetical protein singleton unknown function unknown function 1 47739 47939
AEK08639.1 JF937093_p95 hypothetical protein phrog_1869 unknown function unknown function 1 54001 54168
AEK08567.1 JF937093_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23619 24257
AEK08583.1 JF937093_p39 hypothetical protein phrog_22818 unknown function unknown function -1 31113 31661
AEK08609.1 JF937093_p65 methylase phrog_116 DNA methyltransferase other 1 42636 44030
AEK08632.1 JF937093_p88 hypothetical protein phrog_1545 unknown function unknown function 1 51845 51982
AEK08546.1 JF937093_p2 terminase phrog_9 terminase large subunit head and packaging 1 587 2224
AEK08577.1 JF937093_p33 hypothetical protein phrog_404 minor tail protein tail 1 28724 29098
AEK08644.1 JF937093_p100 hypothetical protein phrog_2057 unknown function unknown function 1 55223 55384
AEK08603.1 JF937093_p59 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 39980 40558
AEK08576.1 JF937093_p32 holin phrog_443 holin lysis 1 28494 28727
AEK08574.1 JF937093_p30 lysin A phrog_700 endolysin lysis 1 26332 27486
AEK08585.1 JF937093_p41 integrase phrog_1 integrase integration and excision 1 32255 33373
AEK08610.1 JF937093_p66 hypothetical protein phrog_6506 Arc-like repressor transcription regulation -1 43999 44160
AEK08601.1 JF937093_p57 hypothetical protein phrog_1834 unknown function unknown function 1 39514 39744
AEK08625.1 JF937093_p81 hypothetical protein phrog_2591 unknown function unknown function 1 49861 50046
AEK08628.1 JF937093_p84 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 50726 51097
AEK08631.1 JF937093_p87 hypothetical protein phrog_1091 unknown function unknown function 1 51666 51845
AEK08587.1 JF937093_p43 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 34160 34828
AEK08608.1 JF937093_p64 hypothetical protein phrog_6650 unknown function unknown function 1 42163 42639
AEK08638.1 JF937093_p94 MerR phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53780 54004
AEK08566.1 JF937093_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23351 23605
AEK08649.1 JF937093_p105 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58431 58757
AEK08594.1 JF937093_p50 hypothetical protein phrog_1849 unknown function unknown function 1 37297 37578
AEK08561.1 JF937093_p17 minor tail protein phrog_732 minor tail protein tail 1 16559 17389
AEK08590.1 JF937093_p46 hypothetical protein phrog_1840 excisionase integration and excision 1 35745 36005
AEK08581.1 JF937093_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30462 30554
AEK08634.1 JF937093_p90 hypothetical protein phrog_2278 unknown function unknown function 1 52370 52540
AEK08560.1 JF937093_p16 hypothetical protein phrog_110 minor tail protein tail 1 14795 16504
AEK08630.1 JF937093_p86 hypothetical protein phrog_6540 unknown function unknown function 1 51373 51669
AEK08620.1 JF937093_p76 hypothetical protein singleton unknown function unknown function 1 48532 48786
AEK08640.1 JF937093_p96 hypothetical protein phrog_6481 unknown function unknown function 1 54175 54384
AEK08588.1 JF937093_p44 DNA binding protein phrog_3 transcriptional repressor transcription regulation 1 34896 35129
AEK08614.1 JF937093_p70 DNA methylase phrog_67 DNA methyltransferase other 1 45071 46330
AEK08611.1 JF937093_p67 hypothetical protein phrog_8485 unknown function unknown function -1 44153 44530
AEK08607.1 JF937093_p63 hypothetical protein phrog_1311 unknown function unknown function 1 42015 42170
AEK08549.1 JF937093_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4451 5044
AEK08579.1 JF937093_p35 DnaQ phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29343 30164
AEK08553.1 JF937093_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6782 7111
AEK08573.1 JF937093_p29 hypothetical protein phrog_747 unknown function unknown function 1 26102 26335
AEK08616.1 JF937093_p72 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 46465 47316
AEK08597.1 JF937093_p53 WhiB family transcription factor phrog_1333 unknown function unknown function 1 38102 38503
AEK08568.1 JF937093_p24 hypothetical protein phrog_754 minor tail protein tail 1 24254 25078
AEK08646.1 JF937093_p102 serine/threonine kinase phrog_3297 kinase other 1 57129 57602
AEK08545.1 JF937093_p1 hypothetical protein phrog_226 minor tail protein tail 1 109 564
AEK08643.1 JF937093_p99 hypothetical protein phrog_1385 unknown function unknown function 1 54988 55230
AEK08547.1 JF937093_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
AEK08637.1 JF937093_p93 hypothetical protein phrog_1467 unknown function unknown function 1 53029 53670
AEK08564.1 JF937093_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21809 22969
AEK08599.1 JF937093_p55 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 38997 39362
AEK08623.1 JF937093_p79 hypothetical protein phrog_1546 unknown function unknown function 1 49141 49515
AEK08557.1 JF937093_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8576 9512
AEK08635.1 JF937093_p91 hypothetical protein phrog_22980 unknown function unknown function 1 52528 52770
AEK08647.1 JF937093_p103 hypothetical protein phrog_1693 unknown function unknown function 1 57605 57811
AEK08598.1 JF937093_p54 hypothetical protein phrog_2096 unknown function unknown function 1 38500 39000
AEK08612.1 JF937093_p68 hypothetical protein phrog_8611 unknown function unknown function -1 44537 44869
AEK08580.1 JF937093_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30248 30469
AEK08562.1 JF937093_p18 minor tail protein phrog_346 minor tail protein tail 1 17386 19923
AEK08584.1 JF937093_p40 hypothetical protein phrog_14103 unknown function unknown function -1 31658 31900
AEK08563.1 JF937093_p19 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 19920 21806
AEK08591.1 JF937093_p47 hypothetical protein phrog_1816 unknown function unknown function 1 36002 36151
AEK08558.1 JF937093_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9531 13013
AEK08565.1 JF937093_p21 hypothetical protein phrog_240 head protein head and packaging 1 22987 23328
AEK08621.1 JF937093_p77 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 48795 48968
AEK08586.1 JF937093_p42 hypothetical protein phrog_1948 unknown function unknown function -1 33439 33927
AEK08605.1 JF937093_p61 DNA methylase phrog_67 DNA methyltransferase other 1 40914 41870
AEK08602.1 JF937093_p58 hypothetical protein phrog_2632 unknown function unknown function 1 39732 39983
AEK08593.1 JF937093_p49 hypothetical protein phrog_1797 unknown function unknown function 1 36378 37049
AEK08648.1 JF937093_p104 glycosyl transferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57808 58431
AEK08645.1 JF937093_p101 glycosyl transferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55690 57126
AEK08548.1 JF937093_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
AEK08575.1 JF937093_p31 lysin B phrog_102 endolysin lysis 1 27486 28484
AEK08641.1 JF937093_p97 hypothetical protein phrog_1694 unknown function unknown function 1 54384 54581
AEK08582.1 JF937093_p38 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 30604 31116
AEK08595.1 JF937093_p51 hypothetical protein phrog_7605 unknown function unknown function 1 37575 37763
AEK08619.1 JF937093_p75 hypothetical protein phrog_2582 unknown function unknown function 1 48080 48433
AEK08624.1 JF937093_p80 hypothetical protein phrog_1546 unknown function unknown function 1 49512 49868
AEK08627.1 JF937093_p83 hypothetical protein phrog_647 unknown function unknown function 1 50315 50599
AEK08606.1 JF937093_p62 hypothetical protein phrog_2070 unknown function unknown function 1 41867 42037