Genomic map of Mycobacterium virus JC27 (JF937099)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF937099
Definition
Mycobacterium virus JC27, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
PVOG
Length
52169
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
63.63
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEK09287.1 JF937099_p94 hypothetical protein phrog_828 unknown function unknown function 1 50665 50871
AEK09269.1 JF937099_p74 hypothetical protein phrog_1584 unknown function unknown function -1 44885 45211
AEK09246.1 JF937099_p49 hypothetical protein phrog_2094 unknown function unknown function -1 35844 36173
AEK09202.1 JF937099_p3 hypothetical protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1139 1612
AEK09256.1 JF937099_p61 hypothetical protein phrog_397 unknown function unknown function -1 40248 40499
AEK09211.1 JF937099_p12 lysin B phrog_102 endolysin lysis 1 6644 7612
AEK09243.1 JF937099_p46 hypothetical protein phrog_542 unknown function unknown function -1 34935 35060
AEK09209.1 JF937099_p10 lysin A phrog_317 endolysin lysis 1 5024 6454
AEK09292.1 JF937099_p79 hypothetical protein singleton unknown function unknown function -1 46936 47151
AEK09203.1 JF937099_p4 hypothetical protein phrog_226 minor tail protein tail 1 1631 2074
AEK09215.1 JF937099_p16 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11696 12208
AEK09204.1 JF937099_p5 hypothetical protein phrog_2830 unknown function unknown function 1 2189 2419
AEK09283.1 JF937099_p90 hypothetical protein phrog_5017 unknown function unknown function -1 49630 49935
AEK09201.1 JF937099_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 748 1044
AEK09273.1 JF937099_p78 hypothetical protein singleton unknown function unknown function -1 46700 46939
AEK09205.1 JF937099_p6 minor tail protein phrog_1197 tail protein tail 1 2704 3774
AEK09228.1 JF937099_p29 minor tail protein phrog_110 minor tail protein tail 1 22002 23804
AEK09265.1 JF937099_p70 hypothetical protein phrog_520 unknown function unknown function -1 43133 43426
AEK09275.1 JF937099_p81 hypothetical protein phrog_1720 unknown function unknown function -1 47556 47825
AEK09250.1 JF937099_p54 hypothetical protein phrog_1503 unknown function unknown function -1 38033 38212
AEK09220.1 JF937099_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14633 15028
AEK09206.1 JF937099_p7 hypothetical protein phrog_553 minor tail protein tail 1 3784 4485
AEK09224.1 JF937099_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16451 17250
AEK09221.1 JF937099_p22 hypothetical protein phrog_123 tail terminator connector 1 15032 15478
AEK09213.1 JF937099_p14 portal protein phrog_104 portal protein head and packaging 1 9317 10759
AEK09270.1 JF937099_p75 hypothetical protein phrog_1809 unknown function unknown function -1 45208 45603
AEK09263.1 JF937099_p68 hypothetical protein singleton unknown function unknown function -1 42925 43017
AEK09260.1 JF937099_p65 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41466 41732
AEK09264.1 JF937099_p69 hypothetical protein phrog_1705 unknown function unknown function -1 43017 43136
AEK09281.1 JF937099_p87 hypothetical protein phrog_2093 unknown function unknown function -1 48888 49016
AEK09289.1 JF937099_p96 hypothetical protein phrog_3574 unknown function unknown function 1 51183 51371
AEK09208.1 JF937099_p9 hypothetical protein phrog_747 unknown function unknown function 1 4767 5024
AEK09223.1 JF937099_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16451 16828
AEK09279.1 JF937099_p85 hypothetical protein phrog_16402 unknown function unknown function -1 48440 48586
AEK09266.1 JF937099_p71 hypothetical protein phrog_2184 unknown function unknown function -1 43423 43722
AEK09255.1 JF937099_p60 hypothetical protein phrog_22335 unknown function unknown function -1 40039 40251
AEK09233.1 JF937099_p34 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 26847 28328
AEK09277.1 JF937099_p83 hypothetical protein phrog_1155 unknown function unknown function -1 48022 48210
AEK09278.1 JF937099_p84 hypothetical protein phrog_12963 unknown function unknown function -1 48207 48443
AEK09262.1 JF937099_p67 hypothetical protein singleton unknown function unknown function -1 42659 42928
AEK09249.1 JF937099_p53 hypothetical protein phrog_221 metallo-phosphoesterase other -1 37269 38036
AEK09229.1 JF937099_p30 hypothetical protein phrog_352 minor tail protein tail 1 23842 24288
AEK09239.1 JF937099_p40 hypothetical protein phrog_2387 nucleotide kinase other -1 31762 32151
AEK09240.1 JF937099_p43 hypothetical protein phrog_1971 unknown function unknown function -1 32407 32694
AEK09295.1 JF937099_p42 hypothetical protein phrog_1860 unknown function unknown function -1 32315 32401
AEK09290.1 JF937099_p97 hypothetical protein phrog_15028 unknown function unknown function 1 51465 51935
AEK09234.1 JF937099_p35 hypothetical protein phrog_644 unknown function unknown function 1 28372 28740
AEK09212.1 JF937099_p13 terminase phrog_9 terminase large subunit head and packaging 1 7632 9320
AEK09225.1 JF937099_p26 tapemeasure protein phrog_305 tail length tape measure protein tail 1 17262 19742
AEK09237.2 JF937099_p38 integrase phrog_95 integrase integration and excision 1 29870 31372
AEK09232.1 JF937099_p33 minor tail protein phrog_346 minor tail protein tail 1 25001 26854
AEK09261.1 JF937099_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41838 42659
AEK09251.1 JF937099_p55 hypothetical protein phrog_474 phosphofructokinase other -1 38209 38691
AEK09291.1 JF937099_p89 hypothetical protein singleton unknown function unknown function -1 49489 49575
AEK09284.1 JF937099_p91 hypothetical protein phrog_5533 unknown function unknown function -1 49977 50162
AEK09218.1 JF937099_p19 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13822 14271
AEK09286.1 JF937099_p93 hypothetical protein phrog_2985 unknown function unknown function 1 50427 50582
AEK09219.1 JF937099_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14271 14633
AEK09285.1 JF937099_p92 hypothetical protein phrog_2212 unknown function unknown function -1 50192 50311
AEK09296.1 JF937099_p41 hypothetical protein phrog_2035 unknown function unknown function -1 32148 32318
AEK09238.1 JF937099_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31493 31765
AEK09216.1 JF937099_p17 major capsid protein phrog_10 major head protein head and packaging 1 12218 13225
AEK09244.1 JF937099_p47 hypothetical protein phrog_1781 unknown function unknown function -1 35057 35287
AEK09271.2 JF937099_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45645 46157
AEK09207.1 JF937099_p8 hypothetical protein phrog_1718 tail protein tail 1 4499 4759
AEK09280.1 JF937099_p86 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48724 48891
AEK09254.1 JF937099_p59 hypothetical protein phrog_1783 unknown function unknown function -1 39875 40024
AEK09259.1 JF937099_p64 hypothetical protein phrog_647 unknown function unknown function -1 41042 41329
AEK09241.1 JF937099_p44 hypothetical protein phrog_383 unknown function unknown function -1 32691 33047
AEK09293.1 JF937099_p58 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39381 39896
AEK09268.1 JF937099_p73 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44068 44892
AEK09245.1 JF937099_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35318 35809
AEK09210.1 JF937099_p11 hypothetical protein phrog_774 unknown function unknown function 1 6451 6654
AEK09236.1 JF937099_p37 hypothetical protein phrog_553 minor tail protein tail 1 28962 29648
AEK09235.1 JF937099_p36 hypothetical protein phrog_1560 unknown function unknown function 1 28750 28962
AEK09226.1 JF937099_p27 minor tail protein phrog_106 minor tail protein tail 1 19766 21823
AEK09247.1 JF937099_p51 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36345 37136
AEK09253.1 JF937099_p57 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39011 39535
AEK09230.1 JF937099_p31 hypothetical protein phrog_981 minor tail protein tail 1 24300 24632
AEK09227.1 JF937099_p28 hypothetical protein phrog_1543 minor tail protein tail 1 21820 22002
AEK09222.1 JF937099_p23 major tail protein phrog_117 major tail protein tail 1 15487 16338
AEK09217.1 JF937099_p18 hypothetical protein phrog_1857 head-tail connector protein connector 1 13304 13822
AEK09214.1 JF937099_p15 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10756 11637
AEK09294.1 JF937099_p50 hypothetical protein phrog_499 unknown function unknown function -1 36166 36348
AEK09276.1 JF937099_p82 hypothetical protein phrog_1387 unknown function unknown function -1 47822 48025
AEK09288.1 JF937099_p95 hypothetical protein phrog_13961 unknown function unknown function -1 50917 51102
AEK09200.1 JF937099_p1 hypothetical protein phrog_4649 unknown function unknown function 1 599 751
AEK09248.1 JF937099_p52 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37129 37269
AEK09267.1 JF937099_p72 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43726 43908
AEK09258.1 JF937099_p63 hypothetical protein phrog_1019 unknown function unknown function -1 40959 41045
AEK09231.1 JF937099_p32 hypothetical protein phrog_1397 unknown function unknown function 1 24629 24976
AEK09274.1 JF937099_p80 hypothetical protein phrog_16071 unknown function unknown function -1 47197 47559
AEK09252.1 JF937099_p56 hypothetical protein phrog_5618 unknown function unknown function -1 38688 39014
AEK09242.1 JF937099_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33068 34894
AEK09272.1 JF937099_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46419 46703
AEK09282.1 JF937099_p88 hypothetical protein phrog_932 unknown function unknown function -1 49038 49187
AEK09257.1 JF937099_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40499 40972