| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JF937103 |
Definition |
Mycobacterium virus Museum, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus. |
DB of origin |
PVOG |
Length |
51426 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
90 |
%GC |
63.63 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEK09740.1 | JF937103_p20 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13421 | 13783 |
| AEK09754.1 | JF937103_p34 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26018 | 27496 |
| AEK09770.1 | JF937103_p50 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35227 | 36042 |
| AEK09755.1 | JF937103_p35 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27586 | 27909 |
| AEK09774.1 | JF937103_p54 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 38077 | 38643 |
| AEK09738.1 | JF937103_p18 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12736 | 12972 |
| AEK09748.1 | JF937103_p28 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20991 | 21173 |
| AEK09726.1 | JF937103_p6 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 1846 | 2916 |
| AEK09786.1 | JF937103_p67 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 43773 | 43892 |
| AEK09777.1 | JF937103_p58 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39719 | 39883 |
| AEK09771.1 | JF937103_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36035 | 36175 |
| AEK09810.1 | JF937103_p86 | hypothetical protein | phrog_16282 | unknown function | unknown function | -1 | 49407 | 49475 |
| AEK09759.2 | JF937103_p39 | integrase | phrog_95 | integrase | integration and excision | 1 | 29483 | 30988 |
| AEK09750.1 | JF937103_p30 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23013 | 23459 |
| AEK09788.1 | JF937103_p69 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 44179 | 44499 |
| AEK09735.1 | JF937103_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10187 | 11068 |
| AEK09812.1 | JF937103_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 375 | 440 |
| AEK09764.1 | JF937103_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 31823 | 32200 |
| AEK09780.1 | JF937103_p61 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 41505 | 41999 |
| AEK09733.1 | JF937103_p13 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7063 | 8751 |
| AEK09727.1 | JF937103_p7 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 2926 | 3615 |
| AEK09792.1 | JF937103_p73 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 45697 | 46014 |
| AEK09746.1 | JF937103_p26 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16420 | 18891 |
| AEK09744.1 | JF937103_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15609 | 15986 |
| AEK09793.1 | JF937103_p74 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 46011 | 46406 |
| AEK09762.1 | JF937103_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31459 | 31554 |
| AEK09749.1 | JF937103_p29 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 21173 | 22975 |
| AEK09796.1 | JF937103_p77 | hypothetical protein | phrog_6474 | recombination directionality factor | integration and excision | -1 | 47514 | 47693 |
| AEK09734.1 | JF937103_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8748 | 10190 |
| AEK09736.1 | JF937103_p16 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11127 | 11639 |
| AEK09789.1 | JF937103_p70 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 44503 | 44685 |
| AEK09794.1 | JF937103_p75 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 46448 | 47134 |
| AEK09723.1 | JF937103_p3 | hypothetical protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 748 | 1044 |
| AEK09767.1 | JF937103_p47 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34296 | 34526 |
| AEK09731.1 | JF937103_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 5573 | 6541 |
| AEK09784.1 | JF937103_p65 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42782 | 43603 |
| AEK09765.1 | JF937103_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32197 | 34023 |
| AEK09743.1 | JF937103_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14637 | 15488 |
| AEK09742.1 | JF937103_p22 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14182 | 14628 |
| AEK09787.1 | JF937103_p68 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43889 | 44182 |
| AEK09747.1 | JF937103_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18915 | 20972 |
| AEK09745.1 | JF937103_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15609 | 16408 |
| AEK09753.1 | JF937103_p33 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 24172 | 26025 |
| AEK09782.1 | JF937103_p63 | hypothetical protein | phrog_9840 | unknown function | unknown function | -1 | 42358 | 42489 |
| AEK09785.1 | JF937103_p66 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 43603 | 43776 |
| AEK09757.1 | JF937103_p37 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28107 | 28910 |
| AEK09778.1 | JF937103_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39951 | 40085 |
| AEK09725.1 | JF937103_p5 | hypothetical protein | phrog_7087 | unknown function | unknown function | 1 | 1539 | 1829 |
| AEK09751.1 | JF937103_p31 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23456 | 23803 |
| AEK09781.1 | JF937103_p62 | hypothetical protein | phrog_2591 | unknown function | unknown function | -1 | 42110 | 42358 |
| AEK09804.1 | JF937103_p85 | hypothetical protein | phrog_4631 | unknown function | unknown function | -1 | 48959 | 49276 |
| AEK09752.1 | JF937103_p32 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23800 | 24147 |
| AEK09801.1 | JF937103_p82 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 48502 | 48627 |
| AEK09768.1 | JF937103_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34557 | 35048 |
| AEK09776.1 | JF937103_p56 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38858 | 39379 |
| AEK09772.1 | JF937103_p52 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 36180 | 37898 |
| AEK09741.1 | JF937103_p21 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13783 | 14178 |
| AEK09803.1 | JF937103_p84 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 48813 | 48962 |
| AEK09775.1 | JF937103_p55 | hypothetical protein | phrog_8843 | unknown function | unknown function | -1 | 38640 | 38861 |
| AEK09807.1 | JF937103_p89 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 50427 | 50756 |
| AEK09756.1 | JF937103_p36 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27919 | 28110 |
| AEK09739.1 | JF937103_p19 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12972 | 13421 |
| AEK09769.1 | JF937103_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35045 | 35230 |
| AEK09800.1 | JF937103_p81 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48338 | 48505 |
| AEK09806.1 | JF937103_p88 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 50251 | 50349 |
| AEK09773.1 | JF937103_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37895 | 38080 |
| AEK09783.1 | JF937103_p64 | NrdH-like glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42486 | 42785 |
| AEK09790.1 | JF937103_p71 | RecB | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44712 | 45530 |
| AEK09737.1 | JF937103_p17 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11649 | 12650 |
| AEK09728.1 | JF937103_p8 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3625 | 3885 |
| AEK09761.1 | JF937103_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31292 | 31462 |
| AEK09763.1 | JF937103_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31551 | 31826 |
| AEK09811.1 | JF937103_p2 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 599 | 751 |
| AEK09797.1 | JF937103_p78 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 47690 | 47962 |
| AEK09795.1 | JF937103_p76 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47222 | 47521 |
| AEK09730.1 | JF937103_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 4150 | 5583 |
| AEK09760.1 | JF937103_p40 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31065 | 31295 |
| AEK09809.1 | JF937103_p57 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39330 | 39740 |
| AEK09779.1 | JF937103_p60 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 40111 | 41508 |
| AEK09805.1 | JF937103_p87 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 49556 | 50254 |
| AEK09798.1 | JF937103_p79 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 47959 | 48153 |
| AEK09808.1 | JF937103_p90 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 50837 | 51040 |
| AEK09729.1 | JF937103_p9 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 3893 | 4150 |
| AEK09802.1 | JF937103_p83 | hypothetical protein | phrog_9318 | unknown function | unknown function | -1 | 48624 | 48794 |
| AEK09799.1 | JF937103_p80 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 48150 | 48338 |
| AEK09791.1 | JF937103_p72 | hypothetical protein | phrog_2730 | unknown function | unknown function | -1 | 45527 | 45700 |
| AEK09724.1 | JF937103_p4 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1079 | 1519 |
| AEK09732.1 | JF937103_p12 | HNH endonuclease | phrog_8660 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6561 | 7079 |
| AEK09766.1 | JF937103_p46 | hypothetical protein | phrog_6173 | unknown function | unknown function | -1 | 34045 | 34299 |
| AEK09758.1 | JF937103_p38 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29031 | 29327 |