| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JF937104 |
Definition |
Mycobacterium virus Pixie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus. |
DB of origin |
PVOG |
Length |
61147 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
67.3 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEK09830.1 | JF937104_p19 | assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11101 | 11535 |
| AEK09825.1 | JF937104_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8739 | 9122 |
| AEK09903.1 | JF937104_p93 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 57420 | 58109 |
| AEK09815.1 | JF937104_p3 | hypothetical protein | phrog_37609 | unknown function | unknown function | 1 | 412 | 579 |
| AEK09851.1 | JF937104_p39 | hypothetical protein | phrog_11692 | unknown function | unknown function | 1 | 30929 | 31120 |
| AEK09854.1 | JF937104_p42 | integrase | phrog_1 | integrase | integration and excision | 1 | 32081 | 33361 |
| AEK09872.1 | JF937104_p60 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 41792 | 41968 |
| AEK09905.1 | JF937104_p95 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 58520 | 58786 |
| AEK09817.1 | JF937104_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 834 | 1028 |
| AEK09869.1 | JF937104_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40343 | 40612 |
| AEK09833.1 | JF937104_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16222 | 17358 |
| AEK09831.1 | JF937104_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11101 | 11945 |
| AEK09871.1 | JF937104_p59 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40914 | 41795 |
| AEK09862.1 | JF937104_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36518 | 36685 |
| AEK09839.1 | JF937104_p27 | hypothetical protein | phrog_3901 | unknown function | unknown function | 1 | 23437 | 23724 |
| AEK09867.1 | JF937104_p55 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39484 | 39777 |
| AEK09829.1 | JF937104_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10319 | 10930 |
| AEK09904.1 | JF937104_p94 | hypothetical protein | phrog_16846 | unknown function | unknown function | 1 | 58224 | 58472 |
| AEK09848.1 | JF937104_p36 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 29889 | 30128 |
| AEK09898.1 | JF937104_p88 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 55789 | 56052 |
| AEK09828.1 | JF937104_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9737 | 10171 |
| AEK09894.1 | JF937104_p84 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 54143 | 54331 |
| AEK09887.1 | JF937104_p77 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 50595 | 50807 |
| AEK09895.1 | JF937104_p85 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 54434 | 54901 |
| AEK09882.1 | JF937104_p72 | hypothetical protein | phrog_15207 | unknown function | unknown function | 1 | 48408 | 48572 |
| AEK09912.1 | JF937104_p97 | hypothetical protein | phrog_35138 | unknown function | unknown function | 1 | 59831 | 60079 |
| AEK09896.1 | JF937104_p86 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 54891 | 55484 |
| AEK09876.1 | JF937104_p66 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43008 | 43526 |
| AEK09870.1 | JF937104_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40609 | 40917 |
| AEK09860.1 | JF937104_p48 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35823 | 36200 |
| AEK09818.1 | JF937104_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1028 | 1255 |
| AEK09861.1 | JF937104_p49 | hypothetical protein | phrog_6733 | unknown function | unknown function | 1 | 36282 | 36521 |
| AEK09907.1 | JF937104_p98 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 60107 | 60334 |
| AEK09824.1 | JF937104_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7697 | 8620 |
| AEK09847.1 | JF937104_p35 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28762 | 29892 |
| AEK09850.1 | JF937104_p38 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30492 | 30932 |
| AEK09842.1 | JF937104_p30 | lysin A | phrog_317 | endolysin | lysis | 1 | 25256 | 26941 |
| AEK09819.1 | JF937104_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1239 | 2663 |
| AEK09875.1 | JF937104_p65 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42812 | 42928 |
| AEK09900.1 | JF937104_p90 | hypothetical protein | phrog_12202 | unknown function | unknown function | 1 | 56524 | 56646 |
| AEK09840.1 | JF937104_p28 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23724 | 24788 |
| AEK09855.1 | JF937104_p43 | hypothetical protein | phrog_8155 | unknown function | unknown function | 1 | 33361 | 33705 |
| AEK09892.1 | JF937104_p82 | hypothetical protein | phrog_7731 | unknown function | unknown function | 1 | 53179 | 53658 |
| AEK09841.1 | JF937104_p29 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24881 | 25237 |
| AEK09880.1 | JF937104_p70 | RusA | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47286 | 47972 |
| AEK09873.1 | JF937104_p62 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 42158 | 42433 |
| AEK09886.1 | JF937104_p76 | hypothetical protein | phrog_7658 | unknown function | unknown function | 1 | 50303 | 50539 |
| AEK09897.1 | JF937104_p87 | hypothetical protein | phrog_15782 | unknown function | unknown function | 1 | 55481 | 55792 |
| AEK09865.1 | JF937104_p53 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37717 | 39072 |
| AEK09888.1 | JF937104_p78 | SprT | phrog_1006 | unknown function | unknown function | 1 | 50938 | 51501 |
| AEK09846.1 | JF937104_p34 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28524 | 28775 |
| AEK09906.1 | JF937104_p96 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 58971 | 59669 |
| AEK09838.1 | JF937104_p26 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 21086 | 23437 |
| AEK09820.1 | JF937104_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2674 | 4239 |
| AEK09832.1 | JF937104_p20 | tapemeasure protein | phrog_971 | endolysin | lysis | 1 | 11949 | 16127 |
| AEK09826.1 | JF937104_p14 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9122 | 9475 |
| AEK09827.1 | JF937104_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9456 | 9740 |
| AEK09863.1 | JF937104_p51 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 36777 | 37454 |
| AEK09879.1 | JF937104_p69 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44279 | 46888 |
| AEK09889.1 | JF937104_p79 | hypothetical protein | phrog_6045 | unknown function | unknown function | 1 | 51629 | 52024 |
| AEK09899.1 | JF937104_p89 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 56267 | 56524 |
| AEK09852.1 | JF937104_p40 | hypothetical protein | phrog_9364 | unknown function | unknown function | 1 | 31181 | 31366 |
| AEK09893.1 | JF937104_p83 | hypothetical protein | phrog_14052 | unknown function | unknown function | 1 | 53658 | 54134 |
| AEK09864.1 | JF937104_p52 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37451 | 37720 |
| AEK09823.1 | JF937104_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7042 | 7626 |
| AEK09853.1 | JF937104_p41 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31415 | 31717 |
| AEK09814.1 | JF937104_p2 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 191 | 415 |
| AEK09835.1 | JF937104_p23 | hypothetical protein | phrog_1697 | minor tail protein | tail | 1 | 19121 | 19633 |
| AEK09813.1 | JF937104_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 51 | 194 |
| AEK09816.1 | JF937104_p4 | hypothetical protein | phrog_14141 | unknown function | unknown function | 1 | 576 | 716 |
| AEK09866.1 | JF937104_p54 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39065 | 39484 |
| AEK09858.1 | JF937104_p46 | HTH DNA binding protein | phrog_20078 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35491 | 35610 |
| AEK09857.1 | JF937104_p45 | immunity protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34735 | 35157 |
| AEK09821.1 | JF937104_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4178 | 6769 |
| AEK09874.1 | JF937104_p64 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 42642 | 42812 |
| AEK09859.1 | JF937104_p47 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35607 | 35819 |
| AEK09844.1 | JF937104_p32 | hypothetical protein | phrog_565 | holin | lysis | 1 | 27737 | 28183 |
| AEK09902.1 | JF937104_p92 | hypothetical protein | phrog_23190 | unknown function | unknown function | 1 | 57029 | 57292 |
| AEK09891.1 | JF937104_p81 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 52298 | 53182 |
| AEK09845.1 | JF937104_p33 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28180 | 28527 |
| AEK09837.1 | JF937104_p25 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 20785 | 21102 |
| AEK09910.1 | JF937104_p61 | hypothetical protein | phrog_8427 | unknown function | unknown function | 1 | 41940 | 42161 |
| AEK09849.1 | JF937104_p37 | hypothetical protein | phrog_16894 | unknown function | unknown function | 1 | 30167 | 30343 |
| AEK09883.1 | JF937104_p73 | peptidase | phrog_908 | unknown function | unknown function | 1 | 48565 | 49482 |
| AEK09877.1 | JF937104_p67 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43623 | 43865 |
| AEK09911.1 | JF937104_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42430 | 42642 |
| AEK09909.1 | JF937104_p100 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60794 | 61081 |
| AEK09890.1 | JF937104_p80 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52122 | 52301 |
| AEK09901.1 | JF937104_p91 | hypothetical protein | phrog_20318 | unknown function | unknown function | 1 | 56768 | 56950 |
| AEK09834.1 | JF937104_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17358 | 19121 |
| AEK09856.1 | JF937104_p44 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33786 | 34706 |
| AEK09836.1 | JF937104_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19682 | 20770 |
| AEK09878.1 | JF937104_p68 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43865 | 44236 |
| AEK09908.1 | JF937104_p99 | hypothetical protein | phrog_15061 | unknown function | unknown function | 1 | 60346 | 60792 |
| AEK09843.1 | JF937104_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 26938 | 27726 |
| AEK09885.1 | JF937104_p75 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 49917 | 50186 |
| AEK09884.1 | JF937104_p74 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 49525 | 49920 |
| AEK09881.1 | JF937104_p71 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 47965 | 48411 |
| AEK09822.1 | JF937104_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 6766 | 6966 |
| AEK09868.1 | JF937104_p56 | DnaQ | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39789 | 40346 |