| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JF937106 |
Definition |
Mycobacterium phage SirDuracell, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; Mycobacterium virus Sirduracell. |
DB of origin |
PVOG |
Length |
75973 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
145 |
%GC |
62.92 |
Number of singletons |
5 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEK10079.1 | JF937106_p14 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 8345 | 8911 |
| AEK10194.1 | JF937106_p131 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 69947 | 70201 |
| AEK10179.1 | JF937106_p114 | hypothetical protein | phrog_8804 | unknown function | unknown function | 1 | 65112 | 65321 |
| AEK10165.1 | JF937106_p100 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59010 | 59450 |
| AEK10074.1 | JF937106_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3645 | 3866 |
| AEK10105.1 | JF937106_p40 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33013 | 33207 |
| AEK10099.1 | JF937106_p34 | lysin B | phrog_102 | endolysin | lysis | 1 | 30523 | 31380 |
| AEK10119.1 | JF937106_p54 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 38527 | 38967 |
| AEK10209.1 | JF937106_p121 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 66998 | 67210 |
| AEK10117.1 | JF937106_p52 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 37442 | 37681 |
| AEK10178.1 | JF937106_p113 | hypothetical protein | phrog_3647 | unknown function | unknown function | 1 | 64963 | 65115 |
| AEK10118.1 | JF937106_p53 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 37659 | 38408 |
| AEK10198.1 | JF937106_p135 | hypothetical protein | phrog_4006 | unknown function | unknown function | -1 | 71672 | 72187 |
| AEK10134.1 | JF937106_p69 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 44986 | 45297 |
| AEK10103.1 | JF937106_p38 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 32336 | 32722 |
| AEK10125.1 | JF937106_p60 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 41226 | 41531 |
| AEK10160.1 | JF937106_p95 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56019 | 56471 |
| AEK10156.1 | JF937106_p91 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53407 | 54732 |
| AEK10203.1 | JF937106_p140 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73850 | 74023 |
| AEK10152.1 | JF937106_p87 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 51828 | 52022 |
| AEK10161.1 | JF937106_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56475 | 56921 |
| AEK10091.1 | JF937106_p26 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 23343 | 26189 |
| AEK10132.1 | JF937106_p67 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 43865 | 44278 |
| AEK10174.1 | JF937106_p109 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 62896 | 63270 |
| AEK10167.1 | JF937106_p102 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 60347 | 60544 |
| AEK10199.1 | JF937106_p136 | hypothetical protein | phrog_8217 | unknown function | unknown function | -1 | 72208 | 72519 |
| AEK10121.1 | JF937106_p56 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 39279 | 39416 |
| AEK10140.1 | JF937106_p75 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 46924 | 47337 |
| AEK10157.1 | JF937106_p92 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 54769 | 55590 |
| AEK10191.1 | JF937106_p128 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68513 | 68644 |
| AEK10094.1 | JF937106_p29 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 27639 | 27815 |
| AEK10206.1 | JF937106_p143 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74464 | 74580 |
| AEK10067.1 | JF937106_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| AEK10162.1 | JF937106_p97 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 56923 | 57258 |
| AEK10164.1 | JF937106_p99 | methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 57794 | 59017 |
| AEK10204.1 | JF937106_p141 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 74020 | 74256 |
| AEK10137.1 | JF937106_p72 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46147 | 46518 |
| AEK10085.1 | JF937106_p20 | tail assembly chaperone | phrog_5940 | tail assembly chaperone | tail | 1 | 11729 | 12007 |
| AEK10143.1 | JF937106_p78 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 47874 | 48524 |
| AEK10173.1 | JF937106_p108 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 62622 | 62885 |
| AEK10075.1 | JF937106_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3853 | 5409 |
| AEK10107.1 | JF937106_p42 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 33677 | 34192 |
| AEK10193.1 | JF937106_p130 | ParB-like nuclease domain | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69439 | 69828 |
| AEK10208.1 | JF937106_p145 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75208 | 75402 |
| AEK10126.1 | JF937106_p61 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 41546 | 41653 |
| AEK10166.1 | JF937106_p101 | ClpP-like protease | phrog_94 | head maturation protease | head and packaging | 1 | 59539 | 60345 |
| AEK10176.1 | JF937106_p111 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 63577 | 64170 |
| AEK10158.1 | JF937106_p93 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 55587 | 55847 |
| AEK10108.1 | JF937106_p43 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 34185 | 34298 |
| AEK10120.1 | JF937106_p55 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 39184 | 39282 |
| AEK10077.1 | JF937106_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6594 | 8087 |
| AEK10124.1 | JF937106_p59 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 40403 | 40681 |
| AEK10083.1 | JF937106_p18 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 10045 | 11016 |
| AEK10200.1 | JF937106_p137 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72639 | 72779 |
| AEK10197.1 | JF937106_p134 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71337 | 71666 |
| AEK10095.1 | JF937106_p30 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 27948 | 28232 |
| AEK10114.1 | JF937106_p49 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 35304 | 35609 |
| AEK10144.1 | JF937106_p79 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 48521 | 48856 |
| AEK10205.1 | JF937106_p142 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74262 | 74459 |
| AEK10073.1 | JF937106_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1963 | 3633 |
| AEK10148.1 | JF937106_p83 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 50528 | 50746 |
| AEK10149.1 | JF937106_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50743 | 51108 |
| AEK10066.1 | JF937106_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| AEK10096.1 | JF937106_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 28306 | 29808 |
| AEK10086.1 | JF937106_p21 | tapemeasure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 12000 | 16733 |
| AEK10078.1 | JF937106_p13 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8154 | 8345 |
| AEK10190.1 | JF937106_p127 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68334 | 68513 |
| AEK10087.1 | JF937106_p22 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 16763 | 18424 |
| AEK10098.1 | JF937106_p33 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 30188 | 30526 |
| AEK10081.1 | JF937106_p16 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 9256 | 9636 |
| AEK10168.1 | JF937106_p103 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 60541 | 60897 |
| AEK10127.1 | JF937106_p62 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 41661 | 41894 |
| AEK10128.1 | JF937106_p63 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 41894 | 42055 |
| AEK10142.1 | JF937106_p77 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 47641 | 47877 |
| AEK10146.1 | JF937106_p81 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50108 | 50296 |
| AEK10109.1 | JF937106_p44 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 34295 | 34423 |
| AEK10136.1 | JF937106_p71 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 45770 | 46144 |
| AEK10102.1 | JF937106_p37 | hypothetical protein | phrog_10154 | unknown function | unknown function | -1 | 32185 | 32331 |
| AEK10069.1 | JF937106_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |
| AEK10153.1 | JF937106_p88 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52177 | 53118 |
| AEK10093.1 | JF937106_p28 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27214 | 27642 |
| AEK10182.1 | JF937106_p117 | RecA | phrog_97 | UvsX-like recombinase | other | 1 | 65654 | 66616 |
| AEK10188.1 | JF937106_p125 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68003 | 68203 |
| AEK10080.1 | JF937106_p15 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 8924 | 9259 |
| AEK10177.1 | JF937106_p112 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64181 | 64966 |
| AEK10192.1 | JF937106_p129 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 69179 | 69442 |
| AEK10187.1 | JF937106_p124 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67852 | 68019 |
| AEK10135.1 | JF937106_p70 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 45297 | 45770 |
| AEK10181.1 | JF937106_p116 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65404 | 65646 |
| AEK10110.1 | JF937106_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34423 | 34530 |
| AEK10154.1 | JF937106_p89 | hypothetical protein | phrog_7164 | unknown function | unknown function | 1 | 53118 | 53315 |
| AEK10104.1 | JF937106_p39 | hypothetical protein | phrog_30616 | unknown function | unknown function | -1 | 32781 | 33023 |
| AEK10151.1 | JF937106_p86 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51469 | 51831 |
| AEK10089.1 | JF937106_p24 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 20100 | 20933 |
| AEK10071.1 | JF937106_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1057 | 1518 |
| AEK10082.1 | JF937106_p17 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 9614 | 10018 |
| AEK10131.1 | JF937106_p66 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42900 | 43868 |
| AEK10201.1 | JF937106_p138 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72892 | 73458 |
| AEK10175.1 | JF937106_p110 | hypothetical protein | phrog_4826 | unknown function | unknown function | 1 | 63270 | 63587 |
| AEK10112.1 | JF937106_p47 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 34764 | 34910 |
| AEK10147.1 | JF937106_p82 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 50278 | 50553 |
| AEK10207.1 | JF937106_p144 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74759 | 75106 |
| AEK10185.1 | JF937106_p120 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66832 | 67005 |
| AEK10133.1 | JF937106_p68 | Erf | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44271 | 44993 |
| AEK10129.1 | JF937106_p64 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 42245 | 42577 |
| AEK10163.1 | JF937106_p98 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57255 | 57797 |
| AEK10097.1 | JF937106_p32 | holin | phrog_526 | holin | lysis | 1 | 29812 | 30195 |
| AEK10068.1 | JF937106_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| AEK10159.1 | JF937106_p94 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 55864 | 56022 |
| AEK10184.1 | JF937106_p119 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66705 | 66845 |
| AEK10138.1 | JF937106_p73 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 46518 | 46691 |
| AEK10070.1 | JF937106_p5 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 1064 |
| AEK10111.1 | JF937106_p46 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 34530 | 34745 |
| AEK10202.1 | JF937106_p139 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 73462 | 73845 |
| AEK10084.1 | JF937106_p19 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11136 | 11597 |
| AEK10116.1 | JF937106_p51 | integrase | phrog_1 | integrase | integration and excision | 1 | 36422 | 37303 |
| AEK10172.1 | JF937106_p107 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62485 | 62625 |
| AEK10186.1 | JF937106_p123 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67526 | 67855 |
| AEK10072.1 | JF937106_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1604 | 1927 |
| AEK10130.1 | JF937106_p65 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 42574 | 42903 |
| AEK10090.1 | JF937106_p25 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20950 | 23346 |
| AEK10122.1 | JF937106_p57 | hypothetical protein | phrog_923 | unknown function | unknown function | 1 | 39413 | 40258 |
| AEK10196.1 | JF937106_p133 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70847 | 71323 |
| AEK10169.1 | JF937106_p104 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60898 | 61167 |
| AEK10155.1 | JF937106_p90 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 53312 | 53410 |
| AEK10150.1 | JF937106_p85 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51101 | 51472 |
| AEK10170.1 | JF937106_p105 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61172 | 61483 |
| AEK10183.1 | JF937106_p118 | hypothetical protein | phrog_14507 | unknown function | unknown function | 1 | 66613 | 66711 |
| AEK10189.1 | JF937106_p126 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68200 | 68337 |
| AEK10171.1 | JF937106_p106 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61536 | 61823 |
| AEK10210.1 | JF937106_p122 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 67191 | 67445 |
| AEK10195.1 | JF937106_p132 | hypothetical protein | phrog_13319 | unknown function | unknown function | -1 | 70398 | 70850 |
| AEK10141.1 | JF937106_p76 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47334 | 47651 |
| AEK10076.1 | JF937106_p11 | hypothetical protein | phrog_2753 | head maturation protease | head and packaging | 1 | 5412 | 6506 |
| AEK10100.1 | JF937106_p35 | NrdH | phrog_726 | unknown function | unknown function | 1 | 31377 | 31793 |
| AEK10106.1 | JF937106_p41 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 33204 | 33680 |
| AEK10139.1 | JF937106_p74 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 46694 | 46927 |
| AEK10088.1 | JF937106_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18412 | 20091 |
| AEK10101.1 | JF937106_p36 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 31800 | 32045 |
| AEK10145.1 | JF937106_p80 | DnaB-like helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 48849 | 50111 |
| AEK10115.1 | JF937106_p50 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 35869 | 36192 |
| AEK10180.1 | JF937106_p115 | hypothetical protein | phrog_6210 | unknown function | unknown function | 1 | 65318 | 65407 |
| AEK10092.1 | JF937106_p27 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 26190 | 27134 |
| AEK10123.1 | JF937106_p58 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 40260 | 40406 |
| AEK10113.1 | JF937106_p48 | hypothetical protein | phrog_17862 | unknown function | unknown function | -1 | 34942 | 35307 |