Genomic map of Mycobacterium phage SirHarley (JF937107)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JF937107
Definition
Mycobacterium phage SirHarley, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dclasvirinae; Plotvirus; Mycobacterium virus Plot.
DB of origin
PVOG
Length
64791
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
59.56
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEK10252.1 JF937107_p43 hypothetical protein phrog_10424 unknown function unknown function -1 35741 36226
AEK10280.1 JF937107_p71 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 54055 55155
AEK10264.1 JF937107_p55 hypothetical protein phrog_10722 unknown function unknown function 1 41845 42126
AEK10269.1 JF937107_p60 hypothetical protein phrog_8491 unknown function unknown function 1 44730 44918
AEK10277.1 JF937107_p68 hypothetical protein phrog_3142 FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase moron, auxiliary metabolic gene and host takeover 1 49381 50091
AEK10262.1 JF937107_p53 hypothetical protein phrog_10201 unknown function unknown function 1 39657 39908
AEK10243.1 JF937107_p33 hypothetical protein phrog_3758 virion structural protein head and packaging 1 29765 30193
AEK10292.1 JF937107_p83 hypothetical protein phrog_8685 unknown function unknown function 1 59281 59526
AEK10251.1 JF937107_p41 hypothetical protein phrog_636 unknown function unknown function -1 34543 35427
AEK10297.1 JF937107_p89 hypothetical protein phrog_2001 unknown function unknown function 1 61242 61364
AEK10242.1 JF937107_p32 hypothetical protein phrog_6443 unknown function unknown function 1 29454 29762
AEK10211.1 JF937107_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 309
AEK10260.1 JF937107_p51 hypothetical protein phrog_5307 unknown function unknown function 1 38692 39282
AEK10285.1 JF937107_p76 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 56738 56971
AEK10215.1 JF937107_p5 hypothetical protein phrog_12064 unknown function unknown function 1 1937 2116
AEK10274.1 JF937107_p65 deoxyribnucleotidase phrog_415 polynucleotide kinase other 1 47753 48370
AEK10272.1 JF937107_p63 hypothetical protein phrog_27898 unknown function unknown function 1 46833 46949
AEK10300.1 JF937107_p85 HNH endonuclease phrog_11872 unknown function unknown function 1 59827 60120
AEK10257.1 JF937107_p48 hypothetical protein phrog_421 unknown function unknown function 1 37246 38355
AEK10279.1 JF937107_p70 hypothetical protein phrog_10638 unknown function unknown function 1 53506 54027
AEK10255.1 JF937107_p46 hypothetical protein phrog_7969 unknown function unknown function 1 36787 37032
AEK10294.1 JF937107_p86 hypothetical protein phrog_780 unknown function unknown function 1 60117 60344
AEK10222.1 JF937107_p12 hypothetical protein phrog_115 minor head protein head and packaging 1 8720 9625
AEK10289.1 JF937107_p80 hypothetical protein phrog_10814 unknown function unknown function 1 58300 58848
AEK10228.1 JF937107_p18 hypothetical protein phrog_4904 unknown function unknown function 1 12751 13128
AEK10295.1 JF937107_p87 hypothetical protein phrog_11488 DNA binding protein DNA, RNA and nucleotide metabolism 1 60341 60886
AEK10230.1 JF937107_p20 hypothetical protein phrog_4995 unknown function unknown function 1 13480 13899
AEK10298.1 JF937107_p90 primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 61432 64365
AEK10254.1 JF937107_p45 hypothetical protein singleton unknown function unknown function 1 36689 36790
AEK10226.1 JF937107_p16 hypothetical protein phrog_5318 unknown function unknown function 1 12021 12389
AEK10241.1 JF937107_p31 hypothetical protein phrog_553 minor tail protein tail 1 28566 29432
AEK10236.1 JF937107_p26 tapemeasure protein phrog_6435 tail length tape measure protein tail 1 16314 21086
AEK10271.1 JF937107_p62 CDC45-like protein phrog_10064 unknown function unknown function 1 45793 46731
AEK10235.1 JF937107_p25 tail assembly chaperone phrog_6778 tail assembly chaperone tail 1 16040 16312
AEK10263.1 JF937107_p54 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 39905 41848
AEK10238.1 JF937107_p28 hypothetical protein phrog_1885 minor tail protein tail 1 22593 24248
AEK10291.1 JF937107_p82 hypothetical protein phrog_1581 unknown function unknown function 1 58970 59284
AEK10247.1 JF937107_p37 hypothetical protein phrog_8515 unknown function unknown function 1 31581 32246
AEK10217.1 JF937107_p7 terminase phrog_2 terminase large subunit head and packaging 1 4532 6298
AEK10239.1 JF937107_p29 minor tail protein phrog_346 minor tail protein tail 1 24248 26518
AEK10212.1 JF937107_p2 hypothetical protein phrog_7407 unknown function unknown function 1 421 1515
AEK10258.1 JF937107_p49 hypothetical protein phrog_13277 unknown function unknown function 1 38355 38459
AEK10275.1 JF937107_p66 methyltransferase phrog_6636 methyltransferase other 1 48370 48900
AEK10231.1 JF937107_p21 hypothetical protein phrog_10150 unknown function unknown function 1 13936 14292
AEK10224.1 JF937107_p14 hypothetical protein phrog_5042 unknown function unknown function 1 10381 10803
AEK10282.1 JF937107_p73 hypothetical protein phrog_2507 unknown function unknown function 1 55946 56182
AEK10216.1 JF937107_p6 VIP2-like toxin domain protein phrog_11599 unknown function unknown function 1 2127 4535
AEK10290.1 JF937107_p81 hypothetical protein phrog_13969 unknown function unknown function 1 58848 58973
AEK10299.1 JF937107_p42 hypothetical protein phrog_11944 unknown function unknown function -1 35511 35741
AEK10244.1 JF937107_p34 lysin A phrog_1512 endolysin lysis 1 30202 31185
AEK10246.1 JF937107_p36 hypothetical protein phrog_21841 unknown function unknown function 1 31450 31707
AEK10265.1 JF937107_p56 hypothetical protein phrog_10024 unknown function unknown function 1 42229 42717
AEK10223.1 JF937107_p13 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 9658 10365
AEK10286.1 JF937107_p77 hypothetical protein phrog_10394 unknown function unknown function 1 57030 57245
AEK10237.1 JF937107_p27 hypothetical protein phrog_7161 minor tail protein tail 1 21076 22596
AEK10250.1 JF937107_p40 hypothetical protein phrog_11465 unknown function unknown function 1 33956 34537
AEK10283.1 JF937107_p74 hypothetical protein phrog_10832 unknown function unknown function 1 56179 56463
AEK10266.1 JF937107_p57 hypothetical protein phrog_549 unknown function unknown function 1 42899 43279
AEK10218.1 JF937107_p8 portal protein phrog_64 portal protein head and packaging 1 6320 7903
AEK10293.1 JF937107_p84 hypothetical protein phrog_10449 unknown function unknown function 1 59523 59837
AEK10225.1 JF937107_p15 major capsid protein phrog_3990 major head protein head and packaging 1 10840 12024
AEK10249.1 JF937107_p39 hypothetical protein phrog_102 endolysin lysis 1 32687 33946
AEK10213.1 JF937107_p3 hypothetical protein phrog_10843 unknown function unknown function 1 1559 1753
AEK10227.1 JF937107_p17 hypothetical protein phrog_5274 unknown function unknown function 1 12392 12724
AEK10232.1 JF937107_p22 hypothetical protein phrog_5278 unknown function unknown function 1 14304 14504
AEK10278.1 JF937107_p69 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 50202 53504
AEK10234.1 JF937107_p24 tail assembly chaperone phrog_4336 tail assembly chaperone tail 1 15418 16071
AEK10281.1 JF937107_p72 hypothetical protein phrog_1981 unknown function unknown function 1 55309 55980
AEK10219.1 JF937107_p9 hypothetical protein phrog_1375 unknown function unknown function 1 7914 8126
AEK10261.1 JF937107_p52 hypothetical protein phrog_11197 unknown function unknown function 1 39360 39599
AEK10267.1 JF937107_p58 hypothetical protein phrog_24640 unknown function unknown function 1 43318 43560
AEK10248.1 JF937107_p38 lysin B phrog_726 unknown function unknown function 1 32230 32685
AEK10268.1 JF937107_p59 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 43598 44728
AEK10253.1 JF937107_p44 hypothetical protein phrog_9402 unknown function unknown function 1 36411 36692
AEK10220.1 JF937107_p10 hypothetical protein phrog_5556 tail protein tail 1 8123 8584
AEK10288.1 JF937107_p79 hypothetical protein phrog_10149 unknown function unknown function 1 57701 58276
AEK10229.1 JF937107_p19 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13121 13483
AEK10296.1 JF937107_p88 hypothetical protein phrog_10882 unknown function unknown function 1 60934 61245
AEK10284.1 JF937107_p75 hypothetical protein phrog_10494 unknown function unknown function 1 56475 56735
AEK10245.1 JF937107_p35 hypothetical protein phrog_9801 unknown function unknown function 1 31182 31436
AEK10233.1 JF937107_p23 major tail protein phrog_4971 major tail protein tail 1 14494 15336
AEK10273.1 JF937107_p64 hypothetical protein phrog_8720 unknown function unknown function 1 46946 47749
AEK10256.1 JF937107_p47 hypothetical protein phrog_36951 unknown function unknown function 1 37032 37244
AEK10287.1 JF937107_p78 hypothetical protein phrog_658 unknown function unknown function 1 57249 57689
AEK10214.1 JF937107_p4 hypothetical protein phrog_10761 unknown function unknown function 1 1763 1927
AEK10276.1 JF937107_p67 hypothetical protein phrog_10271 unknown function unknown function 1 48897 49388
AEK10270.1 JF937107_p61 nucleotide binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44932 45792
AEK10259.1 JF937107_p50 hypothetical protein phrog_11235 unknown function unknown function 1 38452 38628
AEK10221.1 JF937107_p11 hypothetical protein phrog_2864 unknown function unknown function 1 8562 8723
AEK10240.1 JF937107_p30 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26518 28566