| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JF937110 |
Definition |
Mycobacterium virus KSSJEB, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus. |
DB of origin |
PVOG |
Length |
51381 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
63.63 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEK10504.1 | JF937110_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6817 | 8505 |
| AEK10519.1 | JF937110_p26 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 20708 | 20890 |
| AEK10559.1 | JF937110_p67 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 42006 | 42872 |
| AEK10555.1 | JF937110_p63 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40589 | 41398 |
| AEK10528.1 | JF937110_p35 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 27824 | 28633 |
| AEK10539.1 | JF937110_p46 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34714 | 35208 |
| AEK10585.1 | JF937110_p3 | hypothetical protein | phrog_7087 | unknown function | unknown function | 1 | 1475 | 1747 |
| AEK10575.1 | JF937110_p83 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 47502 | 47651 |
| AEK10497.1 | JF937110_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 1764 | 2834 |
| AEK10518.1 | JF937110_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18654 | 20711 |
| AEK10556.1 | JF937110_p64 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41385 | 41531 |
| AEK10507.1 | JF937110_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10881 | 11393 |
| AEK10580.1 | JF937110_p88 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 49614 | 49976 |
| AEK10523.1 | JF937110_p30 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23427 | 23864 |
| AEK10502.1 | JF937110_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5491 | 6459 |
| AEK10501.1 | JF937110_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4068 | 5501 |
| AEK10514.1 | JF937110_p21 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14393 | 15241 |
| AEK10524.1 | JF937110_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23889 | 25742 |
| AEK10499.1 | JF937110_p6 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3543 | 3803 |
| AEK10538.1 | JF937110_p45 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34441 | 34671 |
| AEK10535.1 | JF937110_p42 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 31956 | 32312 |
| AEK10570.1 | JF937110_p78 | hypothetical protein | phrog_1546 | unknown function | unknown function | -1 | 46471 | 46842 |
| AEK10511.1 | JF937110_p18 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13177 | 13539 |
| AEK10517.1 | JF937110_p24 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16162 | 18630 |
| AEK10550.1 | JF937110_p58 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39279 | 39422 |
| AEK10529.1 | JF937110_p36 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28754 | 29050 |
| AEK10573.1 | JF937110_p81 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 47191 | 47316 |
| AEK10583.1 | JF937110_p91 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 50542 | 50745 |
| AEK10500.1 | JF937110_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 3811 | 4068 |
| AEK10579.1 | JF937110_p87 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49414 | 49614 |
| AEK10531.1 | JF937110_p38 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30827 | 31234 |
| AEK10526.1 | JF937110_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27303 | 27626 |
| AEK10510.1 | JF937110_p17 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12728 | 13177 |
| AEK10505.1 | JF937110_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8502 | 9944 |
| AEK10496.1 | JF937110_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 938 | 1378 |
| AEK10569.1 | JF937110_p77 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 46274 | 46474 |
| AEK10567.1 | JF937110_p75 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 45922 | 46188 |
| AEK10540.1 | JF937110_p47 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35243 | 35575 |
| AEK10554.1 | JF937110_p62 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40323 | 40592 |
| AEK10532.1 | JF937110_p39 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31263 | 31358 |
| AEK10521.1 | JF937110_p28 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 22730 | 23176 |
| AEK10576.1 | JF937110_p84 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 47950 | 48621 |
| AEK10549.1 | JF937110_p57 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 39208 | 39282 |
| AEK10560.1 | JF937110_p68 | hypothetical protein | phrog_16650 | unknown function | unknown function | -1 | 42878 | 43093 |
| AEK10530.2 | JF937110_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 29202 | 30704 |
| AEK10574.1 | JF937110_p82 | hypothetical protein | phrog_9318 | unknown function | unknown function | -1 | 47313 | 47483 |
| AEK10547.1 | JF937110_p54 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38189 | 38647 |
| AEK10512.1 | JF937110_p19 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13539 | 13934 |
| AEK10498.1 | JF937110_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 2853 | 3533 |
| AEK10520.1 | JF937110_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20890 | 22692 |
| AEK10533.1 | JF937110_p40 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31355 | 31672 |
| AEK10584.1 | JF937110_p92 | hypothetical protein | phrog_19782 | unknown function | unknown function | -1 | 50776 | 50988 |
| AEK10586.1 | JF937110_p55 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38661 | 39071 |
| AEK10508.1 | JF937110_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11403 | 12413 |
| AEK10503.1 | JF937110_p10 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 6483 | 6797 |
| AEK10513.1 | JF937110_p20 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 13938 | 14384 |
| AEK10562.1 | JF937110_p70 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 43935 | 44261 |
| AEK10566.1 | JF937110_p74 | hypothetical protein | phrog_8497 | unknown function | unknown function | -1 | 45761 | 45925 |
| AEK10525.1 | JF937110_p32 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25735 | 27213 |
| AEK10522.1 | JF937110_p29 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23188 | 23520 |
| AEK10537.1 | JF937110_p44 | hypothetical protein | phrog_6173 | unknown function | unknown function | -1 | 34190 | 34444 |
| AEK10543.1 | JF937110_p50 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36535 | 36675 |
| AEK10509.1 | JF937110_p16 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12492 | 12728 |
| AEK10561.1 | JF937110_p69 | RecB | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43118 | 43942 |
| AEK10571.1 | JF937110_p79 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 46839 | 47027 |
| AEK10568.1 | JF937110_p76 | hypothetical protein | phrog_28275 | unknown function | unknown function | -1 | 46185 | 46277 |
| AEK10558.1 | JF937110_p66 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 41818 | 42009 |
| AEK10516.1 | JF937110_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15350 | 16149 |
| AEK10553.1 | JF937110_p61 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 40240 | 40326 |
| AEK10581.1 | JF937110_p89 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 49979 | 50056 |
| AEK10506.1 | JF937110_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9941 | 10822 |
| AEK10542.1 | JF937110_p49 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35751 | 36542 |
| AEK10548.1 | JF937110_p56 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39050 | 39211 |
| AEK10536.1 | JF937110_p43 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32338 | 34167 |
| AEK10534.1 | JF937110_p41 | hypothetical protein | phrog_9812 | unknown function | unknown function | -1 | 31669 | 31920 |
| AEK10551.1 | JF937110_p59 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39441 | 39920 |
| AEK10578.1 | JF937110_p86 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 48962 | 49246 |
| AEK10515.1 | JF937110_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15350 | 15727 |
| AEK10541.1 | JF937110_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35548 | 35754 |
| AEK10563.1 | JF937110_p71 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 44258 | 44653 |
| AEK10544.1 | JF937110_p51 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 36680 | 37447 |
| AEK10546.1 | JF937110_p53 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37626 | 38192 |
| AEK10577.1 | JF937110_p85 | hypothetical protein | phrog_4958 | unknown function | unknown function | -1 | 48626 | 48910 |
| AEK10565.1 | JF937110_p73 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45469 | 45768 |
| AEK10564.2 | JF937110_p72 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44695 | 45207 |
| AEK10557.1 | JF937110_p65 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41528 | 41821 |
| AEK10582.1 | JF937110_p90 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 50148 | 50492 |
| AEK10552.1 | JF937110_p60 | hypothetical protein | phrog_14414 | unknown function | unknown function | -1 | 39960 | 40160 |
| AEK10545.1 | JF937110_p52 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37444 | 37656 |
| AEK10572.1 | JF937110_p80 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47027 | 47194 |
| AEK10495.1 | JF937110_p1 | hypothetical protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 580 | 903 |
| AEK10527.1 | JF937110_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27636 | 27827 |