Genomic map of Mycobacterium virus Mrgordo (JN020140)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN020140
Definition
Mycobacterium virus MrGordo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
PVOG
Length
50988
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
63.75
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEJ92951.1 JN020140_p66 hypothetical protein phrog_2864 unknown function unknown function -1 42450 42620
AEJ92912.1 JN020140_p24 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16064 18535
AEJ92964.1 JN020140_p52 hypothetical protein phrog_1503 unknown function unknown function -1 37932 38105
AEJ92938.1 JN020140_p79 hypothetical protein phrog_1720 unknown function unknown function -1 46579 46848
AEJ92920.1 JN020140_p32 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 25662 27152
AEJ92890.1 JN020140_p2 hypothetical protein phrog_22409 unknown function unknown function 1 1035 1211
AEJ92941.1 JN020140_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45314 45826
AEJ92919.1 JN020140_p31 structural protein phrog_346 minor tail protein tail 1 23816 25669
AEJ92923.1 JN020140_p35 structural protein phrog_754 minor tail protein tail 1 27763 28566
AEJ92933.1 JN020140_p84 hypothetical protein phrog_2093 unknown function unknown function -1 47573 47701
AEJ92904.1 JN020140_p16 structural protein phrog_1857 head-tail connector protein connector 1 12395 12631
AEJ92971.1 JN020140_p45 hypothetical protein phrog_1781 unknown function unknown function -1 34053 34283
AEJ92917.1 JN020140_p29 hypothetical protein phrog_981 minor tail protein tail 1 23100 23447
AEJ92958.1 JN020140_p59 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39790 40260
AEJ92970.1 JN020140_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34314 34805
AEJ92915.1 JN020140_p27 structural protein phrog_110 minor tail protein tail 1 20817 22619
AEJ92907.1 JN020140_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13442 13837
AEJ92955.1 JN020140_p62 HNH endonuclease phrog_722 unknown function unknown function -1 40590 40946
AEJ92900.1 JN020140_p12 portal protein phrog_104 portal protein head and packaging 1 8414 9856
AEJ92935.1 JN020140_p82 hypothetical protein phrog_1155 unknown function unknown function -1 47221 47409
AEJ92959.1 JN020140_p58 hypothetical protein phrog_397 unknown function unknown function -1 39659 39793
AEJ92895.1 JN020140_p7 structural protein phrog_1718 tail protein tail 1 3814 4074
AEJ92977.1 JN020140_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31022 31201
AEJ92921.1 JN020140_p33 hypothetical protein phrog_644 unknown function unknown function 1 27242 27565
AEJ92929.1 JN020140_p89 hypothetical protein phrog_2985 unknown function unknown function -1 49306 49461
AEJ92896.1 JN020140_p8 hypothetical protein phrog_747 unknown function unknown function 1 4082 4339
AEJ92952.1 JN020140_p65 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41635 42456
AEJ92966.1 JN020140_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36072 36212
AEJ92946.1 JN020140_p71 hypothetical protein phrog_5961 unknown function unknown function -1 43385 43543
AEJ92916.1 JN020140_p28 hypothetical protein phrog_352 minor tail protein tail 1 22657 23103
AEJ92905.1 JN020140_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12631 13080
AEJ92950.1 JN020140_p67 hypothetical protein phrog_2507 unknown function unknown function -1 42620 42793
AEJ92957.1 JN020140_p60 hypothetical protein phrog_1019 unknown function unknown function -1 40247 40333
AEJ92973.1 JN020140_p43 hypothetical protein phrog_4371 unknown function unknown function -1 31915 32193
AEJ92909.1 JN020140_p21 hypothetical protein phrog_117 major tail protein tail 1 14296 15144
AEJ92899.1 JN020140_p11 terminase phrog_9 terminase large subunit head and packaging 1 6729 8417
AEJ92918.1 JN020140_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23444 23791
AEJ92936.1 JN020140_p81 hypothetical protein phrog_1387 unknown function unknown function -1 47024 47224
AEJ92910.1 JN020140_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15253 15630
AEJ92928.1 JN020140_p90 hypothetical protein singleton unknown function unknown function -1 49625 49834
AEJ92963.1 JN020140_p53 hypothetical protein phrog_474 phosphofructokinase other -1 38102 38500
AEJ92948.1 JN020140_p69 hypothetical protein phrog_520 unknown function unknown function -1 42909 43202
AEJ92960.1 JN020140_p57 hypothetical protein phrog_13342 unknown function unknown function -1 39525 39662
AEJ92956.1 JN020140_p61 hypothetical protein phrog_3472 unknown function unknown function -1 40330 40593
AEJ92892.1 JN020140_p4 hypothetical protein phrog_7087 unknown function unknown function 1 1713 2015
AEJ92962.1 JN020140_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38497 39144
AEJ92901.1 JN020140_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9853 10734
AEJ92902.1 JN020140_p14 scaffold protein phrog_233 head scaffolding protein head and packaging 1 10793 11305
AEJ92953.1 JN020140_p64 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41360 41635
AEJ92947.1 JN020140_p70 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43206 43388
AEJ92908.1 JN020140_p20 hypothetical protein phrog_123 tail terminator connector 1 13841 14287
AEJ92903.1 JN020140_p15 major capsid protein phrog_10 major head protein head and packaging 1 11315 12316
AEJ92968.1 JN020140_p48 hypothetical protein phrog_499 unknown function unknown function -1 35139 35297
AEJ92926.1 JN020140_p92 hypothetical protein phrog_828 unknown function unknown function -1 50400 50603
AEJ92911.1 JN020140_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15253 16052
AEJ92976.1 JN020140_p40 hypothetical protein phrog_1860 unknown function unknown function -1 31189 31284
AEJ92980.1 JN020140_p85 hypothetical protein phrog_18314 unknown function unknown function -1 47698 47880
AEJ92944.1 JN020140_p73 hypothetical protein phrog_6489 unknown function unknown function -1 44417 44566
AEJ92894.1 JN020140_p6 structural protein phrog_553 minor tail protein tail 1 3113 3805
AEJ92913.1 JN020140_p25 structural protein phrog_106 minor tail protein tail 1 18559 20616
AEJ92937.1 JN020140_p80 hypothetical protein phrog_6510 unknown function unknown function -1 46845 47027
AEJ92934.1 JN020140_p83 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47409 47576
AEJ92967.1 JN020140_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35294 36079
AEJ92974.1 JN020140_p42 hypothetical protein phrog_383 unknown function unknown function -1 31550 31915
AEJ92961.1 JN020140_p56 hypothetical protein phrog_1783 unknown function unknown function -1 39361 39525
AEJ92925.1 JN020140_p37 integrase phrog_95 integrase integration and excision 1 29130 30632
AEJ92932.1 JN020140_p86 hypothetical protein phrog_2974 unknown function unknown function -1 47877 48098
AEJ92965.1 JN020140_p51 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36217 37935
AEJ92897.1 JN020140_p9 lysin A phrog_317 endolysin lysis 1 4339 5751
AEJ92898.1 JN020140_p10 lysin B phrog_102 endolysin lysis 1 5741 6709
AEJ92943.1 JN020140_p74 hypothetical protein phrog_1584 unknown function unknown function -1 44566 44880
AEJ92914.1 JN020140_p26 hypothetical protein phrog_1543 minor tail protein tail 1 20635 20817
AEJ92889.1 JN020140_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 570 905
AEJ92927.1 JN020140_p91 hypothetical protein phrog_5015 unknown function unknown function -1 49841 50305
AEJ92978.1 JN020140_p38 hypothetical protein phrog_1966 unknown function unknown function -1 30753 31025
AEJ92930.1 JN020140_p88 DNA methylase phrog_363 DNA methyltransferase other -1 48553 49233
AEJ92922.1 JN020140_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27575 27766
AEJ92891.1 JN020140_p3 tail protein phrog_226 minor tail protein tail 1 1225 1665
AEJ92949.1 JN020140_p68 hypothetical protein phrog_1705 unknown function unknown function -1 42790 42912
AEJ92931.1 JN020140_p87 hypothetical protein phrog_932 unknown function unknown function -1 48124 48276
AEJ92939.1 JN020140_p78 hypothetical protein singleton unknown function unknown function -1 46411 46545
AEJ92942.1 JN020140_p75 hypothetical protein phrog_1809 unknown function unknown function -1 44877 45272
AEJ92979.1 JN020140_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38972 39382
AEJ92969.1 JN020140_p47 hypothetical protein phrog_2831 unknown function unknown function -1 34802 35149
AEJ92906.1 JN020140_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13080 13442
AEJ92893.1 JN020140_p5 structural protein phrog_1197 tail protein tail 1 2032 3102
AEJ92940.1 JN020140_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46088 46387
AEJ92954.1 JN020140_p63 hypothetical protein phrog_647 unknown function unknown function -1 40939 41253
AEJ92975.1 JN020140_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31281 31553
AEJ92924.1 JN020140_p36 hypothetical protein phrog_411 unknown function unknown function 1 28687 28983
AEJ92945.1 JN020140_p72 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43573 44403
AEJ92972.1 JN020140_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32190 34016