| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN020141 |
Definition |
Mycobacterium phage Shauna1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; Mycobacterium virus Shauna1. |
DB of origin |
PVOG |
Length |
59315 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
107 |
%GC |
61.7 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEJ93072.1 | JN020141_p103 | galactosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55810 | 57246 |
| AEJ92993.1 | JN020141_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8578 | 9514 |
| AEJ93083.1 | JN020141_p36 | hypothetical protein | phrog_357 | transcriptional repressor | transcription regulation | -1 | 29771 | 30307 |
| AEJ93073.1 | JN020141_p104 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57243 | 57455 |
| AEJ92992.1 | JN020141_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8578 | 9129 |
| AEJ93014.1 | JN020141_p35 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 29636 | 29728 |
| AEJ93056.1 | JN020141_p87 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51499 | 51678 |
| AEJ93077.1 | JN020141_p63 | HNH endonuclease domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42143 | 42505 |
| AEJ93021.1 | JN020141_p46 | hypothetical protein | phrog_18910 | unknown function | unknown function | 1 | 36280 | 36510 |
| AEJ93020.1 | JN020141_p45 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 36023 | 36283 |
| AEJ93038.1 | JN020141_p64 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 42502 | 42687 |
| AEJ93066.1 | JN020141_p97 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 54358 | 54567 |
| AEJ93003.1 | JN020141_p24 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 24892 | 25038 |
| AEJ93079.1 | JN020141_p69 | hypothetical protein | phrog_8485 | unknown function | unknown function | -1 | 44650 | 45027 |
| AEJ93058.1 | JN020141_p89 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 51812 | 51985 |
| AEJ93017.1 | JN020141_p42 | hypothetical protein | phrog_15279 | unknown function | unknown function | 1 | 33969 | 34913 |
| AEJ92982.1 | JN020141_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| AEJ93037.1 | JN020141_p62 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41568 | 42146 |
| AEJ92983.1 | JN020141_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| AEJ93026.1 | JN020141_p51 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37547 | 37723 |
| AEJ93076.1 | JN020141_p107 | HNH endonuclease domain protein | phrog_1271 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58506 | 59249 |
| AEJ93069.1 | JN020141_p100 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54987 | 55400 |
| AEJ92990.1 | JN020141_p10 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 7097 | 7504 |
| AEJ92987.1 | JN020141_p7 | head-to-tail connector complex protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5883 | 6449 |
| AEJ92996.1 | JN020141_p16 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 14859 | 16568 |
| AEJ93075.1 | JN020141_p106 | HNH endonuclease domain protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58075 | 58419 |
| AEJ93071.1 | JN020141_p102 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55632 | 55793 |
| AEJ93033.1 | JN020141_p58 | HTH DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40565 | 40930 |
| AEJ93062.1 | JN020141_p93 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 52734 | 52811 |
| AEJ93015.1 | JN020141_p38 | integrase | phrog_1 | integrase | integration and excision | 1 | 31056 | 32174 |
| AEJ93032.1 | JN020141_p57 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 40068 | 40568 |
| AEJ93045.1 | JN020141_p74 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 47016 | 47867 |
| AEJ92984.1 | JN020141_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| AEJ93044.1 | JN020141_p73 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 46878 | 47012 |
| AEJ93046.1 | JN020141_p75 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 47864 | 48127 |
| AEJ93087.1 | JN020141_p76 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 48124 | 48327 |
| AEJ92988.1 | JN020141_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6446 | 6778 |
| AEJ93049.1 | JN020141_p80 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 49383 | 49658 |
| AEJ93061.1 | JN020141_p92 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 52474 | 52737 |
| AEJ93086.1 | JN020141_p77 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 48330 | 48518 |
| AEJ92989.1 | JN020141_p9 | head-to-tail connector complex protein | phrog_1929 | head-tail connector protein | connector | 1 | 6781 | 7110 |
| AEJ93013.1 | JN020141_p34 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 29425 | 29643 |
| AEJ93034.1 | JN020141_p59 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40930 | 41085 |
| AEJ93001.1 | JN020141_p21 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 23777 | 24214 |
| AEJ92999.1 | JN020141_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19924 | 22764 |
| AEJ93054.1 | JN020141_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 51018 | 51209 |
| AEJ93053.1 | JN020141_p84 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 50809 | 51021 |
| AEJ93029.1 | JN020141_p54 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 39045 | 39326 |
| AEJ93028.1 | JN020141_p53 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 38212 | 38964 |
| AEJ93082.1 | JN020141_p37 | hypothetical protein | phrog_6842 | unknown function | unknown function | -1 | 30352 | 30843 |
| AEJ93063.1 | JN020141_p94 | GIY-YIG endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52846 | 53373 |
| AEJ93041.1 | JN020141_p67 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 43160 | 44527 |
| AEJ93004.1 | JN020141_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25035 | 25202 |
| AEJ93023.1 | JN020141_p48 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 36782 | 37216 |
| AEJ93068.1 | JN020141_p99 | hypothetical protein | phrog_11849 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 54749 | 54901 |
| AEJ92985.1 | JN020141_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4393 | 5043 |
| AEJ92994.1 | JN020141_p14 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9533 | 13063 |
| AEJ93070.1 | JN020141_p101 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55397 | 55639 |
| AEJ93012.1 | JN020141_p33 | hypothetical protein | phrog_8186 | unknown function | unknown function | 1 | 29322 | 29435 |
| AEJ93074.1 | JN020141_p105 | glucosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57452 | 58075 |
| AEJ93000.1 | JN020141_p20 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 22761 | 23711 |
| AEJ93025.1 | JN020141_p50 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37389 | 37550 |
| AEJ93040.1 | JN020141_p66 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 42813 | 43163 |
| AEJ93080.1 | JN020141_p68 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 44496 | 44657 |
| AEJ93022.1 | JN020141_p47 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 36503 | 36781 |
| AEJ93010.1 | JN020141_p31 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 28297 | 28530 |
| AEJ93009.1 | JN020141_p30 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 27898 | 28272 |
| AEJ92991.1 | JN020141_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7632 | 8441 |
| AEJ93002.1 | JN020141_p23 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 24601 | 24885 |
| AEJ93048.1 | JN020141_p79 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 48880 | 49386 |
| AEJ92986.1 | JN020141_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5062 | 5883 |
| AEJ93084.1 | JN020141_p22 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24250 | 24450 |
| AEJ93042.1 | JN020141_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45399 | 45599 |
| AEJ93052.1 | JN020141_p83 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50441 | 50812 |
| AEJ93005.1 | JN020141_p26 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 25237 | 25509 |
| AEJ93019.1 | JN020141_p44 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 35716 | 35931 |
| AEJ93036.1 | JN020141_p61 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41309 | 41554 |
| AEJ93011.1 | JN020141_p32 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 28517 | 29338 |
| AEJ93059.1 | JN020141_p90 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 52038 | 52196 |
| AEJ93016.1 | JN020141_p41 | HTH DNA binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 33682 | 33951 |
| AEJ93030.1 | JN020141_p55 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39323 | 39670 |
| AEJ93057.1 | JN020141_p88 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 51678 | 51815 |
| AEJ93031.1 | JN020141_p56 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39670 | 40071 |
| AEJ93064.1 | JN020141_p95 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53370 | 54041 |
| AEJ93024.1 | JN020141_p49 | hypothetical protein | phrog_17676 | unknown function | unknown function | 1 | 37213 | 37362 |
| AEJ93078.1 | JN020141_p70 | hypothetical protein | phrog_8611 | unknown function | unknown function | -1 | 45034 | 45366 |
| AEJ93051.1 | JN020141_p82 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 49932 | 50444 |
| AEJ93018.1 | JN020141_p43 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 34910 | 35719 |
| AEJ93043.1 | JN020141_p72 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 45625 | 46881 |
| AEJ92981.1 | JN020141_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| AEJ93067.1 | JN020141_p98 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54567 | 54752 |
| AEJ92995.1 | JN020141_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 13064 | 14773 |
| AEJ93047.1 | JN020141_p78 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 48515 | 48883 |
| AEJ93081.1 | JN020141_p39 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 32273 | 32719 |
| AEJ93006.1 | JN020141_p27 | lysin A | phrog_700 | endolysin | lysis | 1 | 25506 | 26660 |
| AEJ93027.1 | JN020141_p52 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37720 | 38130 |
| AEJ93085.1 | JN020141_p40 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 32982 | 33581 |
| AEJ93055.1 | JN020141_p86 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 51206 | 51502 |
| AEJ92997.1 | JN020141_p17 | minor tail subunit | phrog_732 | minor tail protein | tail | 1 | 16605 | 17453 |
| AEJ93008.1 | JN020141_p29 | holin | phrog_443 | holin | lysis | 1 | 27668 | 27901 |
| AEJ92998.1 | JN020141_p18 | minor tail subunit | phrog_346 | minor tail protein | tail | 1 | 17450 | 19927 |
| AEJ93007.1 | JN020141_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 26660 | 27658 |
| AEJ93060.1 | JN020141_p91 | hypothetical protein | phrog_10123 | unknown function | unknown function | 1 | 52193 | 52477 |
| AEJ93050.1 | JN020141_p81 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 49655 | 49939 |
| AEJ93039.1 | JN020141_p65 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 42665 | 42820 |
| AEJ93035.1 | JN020141_p60 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41082 | 41312 |
| AEJ93065.1 | JN020141_p96 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 54184 | 54351 |