Genomic map of Mycobacterium phage Shauna1 (JN020141)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN020141
Definition
Mycobacterium phage Shauna1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; Mycobacterium virus Shauna1.
DB of origin
PVOG
Length
59315
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
107
%GC
61.7
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEJ93072.1 JN020141_p103 galactosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55810 57246
AEJ92993.1 JN020141_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8578 9514
AEJ93083.1 JN020141_p36 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 29771 30307
AEJ93073.1 JN020141_p104 hypothetical protein phrog_1693 unknown function unknown function 1 57243 57455
AEJ92992.1 JN020141_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8578 9129
AEJ93014.1 JN020141_p35 hypothetical protein phrog_1839 unknown function unknown function 1 29636 29728
AEJ93056.1 JN020141_p87 hypothetical protein phrog_1091 unknown function unknown function 1 51499 51678
AEJ93077.1 JN020141_p63 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42143 42505
AEJ93021.1 JN020141_p46 hypothetical protein phrog_18910 unknown function unknown function 1 36280 36510
AEJ93020.1 JN020141_p45 hypothetical protein phrog_1840 excisionase integration and excision 1 36023 36283
AEJ93038.1 JN020141_p64 hypothetical protein phrog_2070 unknown function unknown function 1 42502 42687
AEJ93066.1 JN020141_p97 hypothetical protein phrog_6481 unknown function unknown function 1 54358 54567
AEJ93003.1 JN020141_p24 hypothetical protein phrog_932 unknown function unknown function 1 24892 25038
AEJ93079.1 JN020141_p69 hypothetical protein phrog_8485 unknown function unknown function -1 44650 45027
AEJ93058.1 JN020141_p89 hypothetical protein phrog_5186 unknown function unknown function 1 51812 51985
AEJ93017.1 JN020141_p42 hypothetical protein phrog_15279 unknown function unknown function 1 33969 34913
AEJ92982.1 JN020141_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
AEJ93037.1 JN020141_p62 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41568 42146
AEJ92983.1 JN020141_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
AEJ93026.1 JN020141_p51 hypothetical protein phrog_3381 unknown function unknown function 1 37547 37723
AEJ93076.1 JN020141_p107 HNH endonuclease domain protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58506 59249
AEJ93069.1 JN020141_p100 hypothetical protein phrog_1186 unknown function unknown function 1 54987 55400
AEJ92990.1 JN020141_p10 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 7097 7504
AEJ92987.1 JN020141_p7 head-to-tail connector complex protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
AEJ92996.1 JN020141_p16 minor tail subunit phrog_110 minor tail protein tail 1 14859 16568
AEJ93075.1 JN020141_p106 HNH endonuclease domain protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58075 58419
AEJ93071.1 JN020141_p102 hypothetical protein phrog_2057 unknown function unknown function 1 55632 55793
AEJ93033.1 JN020141_p58 HTH DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40565 40930
AEJ93062.1 JN020141_p93 hypothetical protein phrog_6194 unknown function unknown function 1 52734 52811
AEJ93015.1 JN020141_p38 integrase phrog_1 integrase integration and excision 1 31056 32174
AEJ93032.1 JN020141_p57 hypothetical protein phrog_2096 unknown function unknown function 1 40068 40568
AEJ93045.1 JN020141_p74 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 47016 47867
AEJ92984.1 JN020141_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
AEJ93044.1 JN020141_p73 hypothetical protein phrog_2451 unknown function unknown function 1 46878 47012
AEJ93046.1 JN020141_p75 hypothetical protein phrog_2080 unknown function unknown function 1 47864 48127
AEJ93087.1 JN020141_p76 hypothetical protein phrog_2730 unknown function unknown function 1 48124 48327
AEJ92988.1 JN020141_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6446 6778
AEJ93049.1 JN020141_p80 hypothetical protein phrog_722 unknown function unknown function 1 49383 49658
AEJ93061.1 JN020141_p92 hypothetical protein phrog_2247 unknown function unknown function 1 52474 52737
AEJ93086.1 JN020141_p77 hypothetical protein phrog_1943 unknown function unknown function 1 48330 48518
AEJ92989.1 JN020141_p9 head-to-tail connector complex protein phrog_1929 head-tail connector protein connector 1 6781 7110
AEJ93013.1 JN020141_p34 hypothetical protein phrog_1791 unknown function unknown function 1 29425 29643
AEJ93034.1 JN020141_p59 hypothetical protein phrog_2078 unknown function unknown function 1 40930 41085
AEJ93001.1 JN020141_p21 hypothetical protein phrog_644 unknown function unknown function 1 23777 24214
AEJ92999.1 JN020141_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19924 22764
AEJ93054.1 JN020141_p85 hypothetical protein phrog_1901 unknown function unknown function 1 51018 51209
AEJ93053.1 JN020141_p84 hypothetical protein phrog_2939 unknown function unknown function 1 50809 51021
AEJ93029.1 JN020141_p54 hypothetical protein phrog_1849 unknown function unknown function 1 39045 39326
AEJ93028.1 JN020141_p53 hypothetical protein phrog_3416 unknown function unknown function 1 38212 38964
AEJ93082.1 JN020141_p37 hypothetical protein phrog_6842 unknown function unknown function -1 30352 30843
AEJ93063.1 JN020141_p94 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 52846 53373
AEJ93041.1 JN020141_p67 DNA methylase phrog_116 DNA methyltransferase other 1 43160 44527
AEJ93004.1 JN020141_p25 hypothetical protein phrog_1172 unknown function unknown function 1 25035 25202
AEJ93023.1 JN020141_p48 hypothetical protein phrog_2021 unknown function unknown function 1 36782 37216
AEJ93068.1 JN020141_p99 hypothetical protein phrog_11849 membrane protein moron, auxiliary metabolic gene and host takeover 1 54749 54901
AEJ92985.1 JN020141_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4393 5043
AEJ92994.1 JN020141_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9533 13063
AEJ93070.1 JN020141_p101 hypothetical protein phrog_1385 unknown function unknown function 1 55397 55639
AEJ93012.1 JN020141_p33 hypothetical protein phrog_8186 unknown function unknown function 1 29322 29435
AEJ93074.1 JN020141_p105 glucosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57452 58075
AEJ93000.1 JN020141_p20 hypothetical protein phrog_553 minor tail protein tail 1 22761 23711
AEJ93025.1 JN020141_p50 hypothetical protein phrog_1816 unknown function unknown function 1 37389 37550
AEJ93040.1 JN020141_p66 hypothetical protein phrog_3821 unknown function unknown function 1 42813 43163
AEJ93080.1 JN020141_p68 hypothetical protein phrog_6506 Arc-like repressor transcription regulation -1 44496 44657
AEJ93022.1 JN020141_p47 hypothetical protein phrog_780 unknown function unknown function 1 36503 36781
AEJ93010.1 JN020141_p31 hypothetical protein phrog_2004 unknown function unknown function 1 28297 28530
AEJ93009.1 JN020141_p30 hypothetical protein phrog_404 minor tail protein tail 1 27898 28272
AEJ92991.1 JN020141_p11 major tail subunit phrog_476 major tail protein tail 1 7632 8441
AEJ93002.1 JN020141_p23 hypothetical protein phrog_411 unknown function unknown function 1 24601 24885
AEJ93048.1 JN020141_p79 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism 1 48880 49386
AEJ92986.1 JN020141_p6 major capsid protein phrog_267 major head protein head and packaging 1 5062 5883
AEJ93084.1 JN020141_p22 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 24250 24450
AEJ93042.1 JN020141_p71 hypothetical protein singleton unknown function unknown function 1 45399 45599
AEJ93052.1 JN020141_p83 hypothetical protein phrog_647 unknown function unknown function 1 50441 50812
AEJ93005.1 JN020141_p26 hypothetical protein phrog_747 unknown function unknown function 1 25237 25509
AEJ93019.1 JN020141_p44 hypothetical protein phrog_2025 unknown function unknown function 1 35716 35931
AEJ93036.1 JN020141_p61 hypothetical protein phrog_2632 unknown function unknown function 1 41309 41554
AEJ93011.1 JN020141_p32 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 28517 29338
AEJ93059.1 JN020141_p90 hypothetical protein phrog_2278 unknown function unknown function 1 52038 52196
AEJ93016.1 JN020141_p41 HTH DNA binding domain protein phrog_3 transcriptional repressor transcription regulation 1 33682 33951
AEJ93030.1 JN020141_p55 hypothetical protein phrog_658 unknown function unknown function 1 39323 39670
AEJ93057.1 JN020141_p88 hypothetical protein phrog_1545 unknown function unknown function 1 51678 51815
AEJ93031.1 JN020141_p56 WhiB family transcription factor phrog_1333 unknown function unknown function 1 39670 40071
AEJ93064.1 JN020141_p95 hypothetical protein phrog_1467 unknown function unknown function 1 53370 54041
AEJ93024.1 JN020141_p49 hypothetical protein phrog_17676 unknown function unknown function 1 37213 37362
AEJ93078.1 JN020141_p70 hypothetical protein phrog_8611 unknown function unknown function -1 45034 45366
AEJ93051.1 JN020141_p82 hypothetical protein phrog_722 unknown function unknown function 1 49932 50444
AEJ93018.1 JN020141_p43 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 34910 35719
AEJ93043.1 JN020141_p72 DNA methylase phrog_67 DNA methyltransferase other 1 45625 46881
AEJ92981.1 JN020141_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
AEJ93067.1 JN020141_p98 hypothetical protein phrog_1694 unknown function unknown function 1 54567 54752
AEJ92995.1 JN020141_p15 minor tail subunit phrog_106 minor tail protein tail 1 13064 14773
AEJ93047.1 JN020141_p78 hypothetical protein phrog_1546 unknown function unknown function 1 48515 48883
AEJ93081.1 JN020141_p39 hypothetical protein phrog_1948 unknown function unknown function -1 32273 32719
AEJ93006.1 JN020141_p27 lysin A phrog_700 endolysin lysis 1 25506 26660
AEJ93027.1 JN020141_p52 hypothetical protein phrog_1797 unknown function unknown function 1 37720 38130
AEJ93085.1 JN020141_p40 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 32982 33581
AEJ93055.1 JN020141_p86 hypothetical protein phrog_6540 unknown function unknown function 1 51206 51502
AEJ92997.1 JN020141_p17 minor tail subunit phrog_732 minor tail protein tail 1 16605 17453
AEJ93008.1 JN020141_p29 holin phrog_443 holin lysis 1 27668 27901
AEJ92998.1 JN020141_p18 minor tail subunit phrog_346 minor tail protein tail 1 17450 19927
AEJ93007.1 JN020141_p28 lysin B phrog_102 endolysin lysis 1 26660 27658
AEJ93060.1 JN020141_p91 hypothetical protein phrog_10123 unknown function unknown function 1 52193 52477
AEJ93050.1 JN020141_p81 hypothetical protein phrog_647 unknown function unknown function 1 49655 49939
AEJ93039.1 JN020141_p65 hypothetical protein phrog_1311 unknown function unknown function 1 42665 42820
AEJ93035.1 JN020141_p60 hypothetical protein phrog_1834 unknown function unknown function 1 41082 41312
AEJ93065.1 JN020141_p96 hypothetical protein phrog_1869 unknown function unknown function 1 54184 54351