| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN185608 |
Definition |
Mycobacterium virus JAWS, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus. |
DB of origin |
PVOG |
Length |
59749 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
66.61 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEJ93796.1 | JN185608_p44 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 35387 | 35653 |
| AEJ93839.1 | JN185608_p87 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 56604 | 56765 |
| AEJ93813.1 | JN185608_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42135 | 42329 |
| AEJ93830.1 | JN185608_p78 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52395 | 52871 |
| AEJ93757.1 | JN185608_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 294 | 479 |
| AEJ93781.1 | JN185608_p26 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 20866 | 23298 |
| AEJ93765.1 | JN185608_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7088 | 7273 |
| AEJ93759.1 | JN185608_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 727 | 954 |
| AEJ93791.1 | JN185608_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30175 | 30453 |
| AEJ93826.1 | JN185608_p74 | hypothetical protein | phrog_1006 | unknown function | unknown function | 1 | 50423 | 50884 |
| AEJ93807.1 | JN185608_p55 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39763 | 39960 |
| AEJ93808.1 | JN185608_p56 | DnaQ-like helicase | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39971 | 40525 |
| AEJ93797.1 | JN185608_p45 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35655 | 36005 |
| AEJ93762.1 | JN185608_p7 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1587 | 3008 |
| AEJ93773.1 | JN185608_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11223 | 11660 |
| AEJ93834.1 | JN185608_p82 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 53672 | 53824 |
| AEJ93777.1 | JN185608_p22 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 17142 | 18908 |
| AEJ93760.1 | JN185608_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1180 | 1383 |
| AEJ93828.1 | JN185608_p76 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51371 | 51499 |
| AEJ93794.1 | JN185608_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32469 | 33557 |
| AEJ93845.1 | JN185608_p93 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59206 | 59391 |
| AEJ93761.1 | JN185608_p6 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 1376 | 1603 |
| AEJ93771.1 | JN185608_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9973 | 10398 |
| AEJ93793.1 | JN185608_p38 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 31333 | 31731 |
| AEJ93848.1 | JN185608_p41 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33661 | 34563 |
| AEJ93819.1 | JN185608_p67 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44140 | 44511 |
| AEJ93782.1 | JN185608_p27 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 23310 | 24323 |
| AEJ93784.1 | JN185608_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24796 | 26451 |
| AEJ93809.1 | JN185608_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40525 | 40791 |
| AEJ93814.1 | JN185608_p62 | hypothetical protein | phrog_9435 | unknown function | unknown function | 1 | 42383 | 42871 |
| AEJ93804.1 | JN185608_p52 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38760 | 39110 |
| AEJ93786.1 | JN185608_p31 | hypothetical protein | phrog_565 | holin | lysis | 1 | 27331 | 27771 |
| AEJ93780.1 | JN185608_p25 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 20557 | 20865 |
| AEJ93810.1 | JN185608_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40788 | 41108 |
| AEJ93795.1 | JN185608_p43 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35130 | 35390 |
| AEJ93774.1 | JN185608_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11223 | 12070 |
| AEJ93815.1 | JN185608_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42868 | 43086 |
| AEJ93833.1 | JN185608_p81 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53478 | 53675 |
| AEJ93841.1 | JN185608_p89 | hypothetical protein | phrog_5243 | unknown function | unknown function | 1 | 57580 | 57795 |
| AEJ93805.1 | JN185608_p53 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39107 | 39487 |
| AEJ93831.1 | JN185608_p79 | hypothetical protein | phrog_5794 | unknown function | unknown function | 1 | 52865 | 53149 |
| AEJ93837.1 | JN185608_p85 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55506 | 56045 |
| AEJ93838.1 | JN185608_p86 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56038 | 56607 |
| AEJ93812.1 | JN185608_p60 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41260 | 42138 |
| AEJ93840.1 | JN185608_p88 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 56937 | 57566 |
| AEJ93788.1 | JN185608_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28109 | 28360 |
| AEJ93849.1 | JN185608_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31806 | 32111 |
| AEJ93789.1 | JN185608_p34 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28347 | 29555 |
| AEJ93785.1 | JN185608_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26448 | 27320 |
| AEJ93772.1 | JN185608_p17 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 10498 | 11109 |
| AEJ93816.1 | JN185608_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43083 | 43205 |
| AEJ93798.1 | JN185608_p46 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36184 | 36351 |
| AEJ93766.1 | JN185608_p11 | scaffold protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7310 | 7852 |
| AEJ93790.1 | JN185608_p35 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29747 | 30178 |
| AEJ93842.1 | JN185608_p90 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 57917 | 58132 |
| AEJ93787.1 | JN185608_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27786 | 28112 |
| AEJ93820.1 | JN185608_p68 | hypothetical protein | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44553 | 47171 |
| AEJ93779.1 | JN185608_p24 | minor tail subunit | phrog_1565 | minor tail protein | tail | 1 | 19468 | 20550 |
| AEJ93770.1 | JN185608_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9695 | 9976 |
| AEJ93825.1 | JN185608_p73 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50078 | 50350 |
| AEJ93823.1 | JN185608_p71 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 48855 | 49835 |
| AEJ93835.1 | JN185608_p83 | RtcB | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 53936 | 55123 |
| AEJ93768.1 | JN185608_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9017 | 9361 |
| AEJ93775.1 | JN185608_p20 | tapemeasure protein | phrog_971 | endolysin | lysis | 1 | 12070 | 15903 |
| AEJ93806.1 | JN185608_p54 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39488 | 39766 |
| AEJ93829.1 | JN185608_p77 | regulator | phrog_2342 | unknown function | unknown function | 1 | 51496 | 52398 |
| AEJ93783.1 | JN185608_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24407 | 24778 |
| AEJ93827.1 | JN185608_p75 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51009 | 51284 |
| AEJ93756.1 | JN185608_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 297 |
| AEJ93844.1 | JN185608_p92 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 58982 | 59212 |
| AEJ93763.1 | JN185608_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3020 | 4576 |
| AEJ93824.1 | JN185608_p72 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 49848 | 50081 |
| AEJ93803.1 | JN185608_p51 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38558 | 38728 |
| AEJ93818.1 | JN185608_p66 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43898 | 44140 |
| AEJ93836.1 | JN185608_p84 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55120 | 55506 |
| AEJ93802.1 | JN185608_p50 | thioredoxin | phrog_2781 | unknown function | unknown function | 1 | 37605 | 38546 |
| AEJ93817.1 | JN185608_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43287 | 43796 |
| AEJ93821.1 | JN185608_p69 | hypothetical protein | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47568 | 48278 |
| AEJ93799.1 | JN185608_p47 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36348 | 36560 |
| AEJ93767.1 | JN185608_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7928 | 8863 |
| AEJ93758.1 | JN185608_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 476 | 730 |
| AEJ93846.1 | JN185608_p94 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59388 | 59690 |
| AEJ93801.1 | JN185608_p49 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37345 | 37608 |
| AEJ93764.1 | JN185608_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4521 | 7091 |
| AEJ93769.1 | JN185608_p14 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9358 | 9714 |
| AEJ93822.1 | JN185608_p70 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48271 | 48732 |
| AEJ93776.1 | JN185608_p21 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 16005 | 17141 |
| AEJ93800.1 | JN185608_p48 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 36557 | 37348 |
| AEJ93843.1 | JN185608_p91 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58280 | 58549 |
| AEJ93778.1 | JN185608_p23 | minor tail subunit | phrog_1697 | minor tail protein | tail | 1 | 18908 | 19384 |
| AEJ93811.1 | JN185608_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41105 | 41263 |
| AEJ93792.1 | JN185608_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30529 | 31218 |
| AEJ93832.1 | JN185608_p80 | hypothetical protein | phrog_35284 | unknown function | unknown function | 1 | 53149 | 53484 |
| AEJ93847.1 | JN185608_p42 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34590 | 34970 |