| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN391441 |
Definition |
Mycobacterium phage Elph10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
PVOG |
Length |
74675 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
143 |
%GC |
63 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEL21837.1 | JN391441_p95 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56421 | 56579 |
| AEL21786.1 | JN391441_p28 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24147 | 26987 |
| AEL21799.1 | JN391441_p57 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 39949 | 40086 |
| AEL21868.1 | JN391441_p143 | hypothetical protein | phrog_8627 | unknown function | unknown function | 1 | 74149 | 74562 |
| AEL21802.1 | JN391441_p60 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41073 | 41351 |
| AEL21843.1 | JN391441_p101 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 59692 | 60471 |
| AEL21830.1 | JN391441_p88 | Pnk | phrog_505 | polynucleotide kinase | other | 1 | 52465 | 53406 |
| AEL21816.1 | JN391441_p74 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47174 | 47353 |
| AEL21890.1 | JN391441_p49 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 35705 | 35851 |
| AEL21840.1 | JN391441_p98 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57416 | 57922 |
| AEL21884.1 | JN391441_p125 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 68301 | 68690 |
| AEL21878.1 | JN391441_p131 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 70628 | 70738 |
| AEL21864.1 | JN391441_p122 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 67386 | 67517 |
| AEL21873.1 | JN391441_p136 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 72305 | 72478 |
| AEL21845.1 | JN391441_p103 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60825 | 61115 |
| AEL21854.1 | JN391441_p112 | RecA | phrog_97 | UvsX-like recombinase | other | 1 | 64622 | 65584 |
| AEL21767.1 | JN391441_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2280 | 3950 |
| AEL21831.1 | JN391441_p89 | hypothetical protein | phrog_7164 | unknown function | unknown function | 1 | 53406 | 53603 |
| AEL21847.1 | JN391441_p105 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61484 | 61774 |
| AEL21858.1 | JN391441_p116 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 66064 | 66318 |
| AEL21833.1 | JN391441_p91 | hypothetical protein | phrog_10857 | unknown function | unknown function | 1 | 53695 | 53967 |
| AEL21794.1 | JN391441_p37 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32182 | 32598 |
| AEL21779.1 | JN391441_p21 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11943 | 12404 |
| AEL21874.1 | JN391441_p135 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 71947 | 72300 |
| AEL21813.1 | JN391441_p71 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 45965 | 46435 |
| AEL21856.1 | JN391441_p114 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 65705 | 65878 |
| AEL21836.1 | JN391441_p94 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56144 | 56404 |
| AEL21798.1 | JN391441_p56 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 39854 | 39952 |
| AEL21772.1 | JN391441_p14 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8434 | 8613 |
| AEL21880.1 | JN391441_p129 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 69975 | 70322 |
| AEL21883.1 | JN391441_p126 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 68809 | 69063 |
| AEL21870.1 | JN391441_p139 | hypothetical protein | phrog_8479 | unknown function | unknown function | -1 | 72922 | 73086 |
| AEL21790.1 | JN391441_p33 | lysin A | phrog_317 | endolysin | lysis | 1 | 29111 | 30613 |
| AEL21835.1 | JN391441_p93 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 55326 | 56147 |
| AEL21899.1 | JN391441_p40 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33464 | 33661 |
| AEL21842.1 | JN391441_p100 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59135 | 59575 |
| AEL21766.1 | JN391441_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1152 | 1613 |
| AEL21795.1 | JN391441_p38 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32605 | 32850 |
| AEL21817.1 | JN391441_p75 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47350 | 47583 |
| AEL21820.1 | JN391441_p78 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48297 | 48533 |
| AEL21851.1 | JN391441_p109 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 63100 | 63579 |
| AEL21896.1 | JN391441_p43 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 34379 | 34783 |
| AEL21801.1 | JN391441_p59 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 40930 | 41076 |
| AEL21761.1 | JN391441_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| AEL21891.1 | JN391441_p48 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 35471 | 35686 |
| AEL21791.1 | JN391441_p34 | holin | phrog_526 | holin | lysis | 1 | 30617 | 31000 |
| AEL21834.1 | JN391441_p92 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53964 | 55289 |
| AEL21885.1 | JN391441_p124 | ParBc domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 68041 | 68304 |
| AEL21839.1 | JN391441_p97 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57048 | 57383 |
| AEL21807.1 | JN391441_p65 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 42916 | 43248 |
| AEL21877.1 | JN391441_p132 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 70743 | 70979 |
| AEL21796.1 | JN391441_p52 | integrase | phrog_1 | integrase | integration and excision | 1 | 37092 | 37973 |
| AEL21846.1 | JN391441_p104 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61120 | 61431 |
| AEL21806.1 | JN391441_p64 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 42566 | 42727 |
| AEL21815.1 | JN391441_p73 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46806 | 47174 |
| AEL21887.1 | JN391441_p54 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 38329 | 39102 |
| AEL21879.1 | JN391441_p130 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 70306 | 70623 |
| AEL21764.1 | JN391441_p4 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 739 | 1032 |
| AEL21765.1 | JN391441_p5 | hypothetical protein | phrog_8426 | unknown function | unknown function | 1 | 1010 | 1159 |
| AEL21876.1 | JN391441_p133 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 70995 | 71543 |
| AEL21819.1 | JN391441_p77 | HNH endonuclease domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47990 | 48307 |
| AEL21903.1 | JN391441_p7 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1685 | 1927 |
| AEL21782.1 | JN391441_p24 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 17567 | 19228 |
| AEL21784.1 | JN391441_p26 | minor tail subunit | phrog_732 | minor tail protein | tail | 1 | 20904 | 21737 |
| AEL21762.1 | JN391441_p2 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 267 | 560 |
| AEL21781.1 | JN391441_p23 | tapemeasure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 12807 | 17537 |
| AEL21841.1 | JN391441_p99 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 57919 | 59142 |
| AEL21793.1 | JN391441_p36 | lysin B | phrog_102 | endolysin | lysis | 1 | 31328 | 32185 |
| AEL21861.1 | JN391441_p119 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 66876 | 67076 |
| AEL21900.1 | JN391441_p39 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33030 | 33416 |
| AEL21785.1 | JN391441_p27 | minor tail subunit | phrog_346 | minor tail protein | tail | 1 | 21754 | 24150 |
| AEL21800.1 | JN391441_p58 | pentapeptide repeat family protein | phrog_923 | unknown function | unknown function | 1 | 40083 | 40928 |
| AEL21823.1 | JN391441_p81 | DnaB-like helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 49502 | 50764 |
| AEL21882.1 | JN391441_p127 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 69131 | 69499 |
| AEL21774.1 | JN391441_p16 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 9194 | 9529 |
| AEL21775.1 | JN391441_p17 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 9526 | 9906 |
| AEL21768.1 | JN391441_p10 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3962 | 4183 |
| AEL21811.1 | JN391441_p69 | Erf | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44939 | 45661 |
| AEL21888.1 | JN391441_p51 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 36539 | 36841 |
| AEL21844.1 | JN391441_p102 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 60468 | 60824 |
| AEL21826.1 | JN391441_p84 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51181 | 51402 |
| AEL21869.1 | JN391441_p141 | hypothetical protein | phrog_8080 | unknown function | unknown function | -1 | 73557 | 73775 |
| AEL21789.1 | JN391441_p32 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28753 | 29037 |
| AEL21838.1 | JN391441_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56576 | 57046 |
| AEL21818.1 | JN391441_p76 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 47580 | 47993 |
| AEL21832.1 | JN391441_p90 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 53600 | 53698 |
| AEL21875.1 | JN391441_p134 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 71547 | 71942 |
| AEL21787.1 | JN391441_p29 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 26988 | 27950 |
| AEL21825.1 | JN391441_p83 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 50946 | 51206 |
| AEL21805.1 | JN391441_p63 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42334 | 42633 |
| AEL21797.1 | JN391441_p53 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38112 | 38351 |
| AEL21814.1 | JN391441_p72 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46435 | 46803 |
| AEL21892.1 | JN391441_p47 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35242 | 35478 |
| AEL21849.1 | JN391441_p107 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 62449 | 62712 |
| AEL21771.1 | JN391441_p13 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6818 | 8311 |
| AEL21853.1 | JN391441_p111 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 64372 | 64614 |
| AEL21773.1 | JN391441_p15 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 8613 | 9179 |
| AEL21866.1 | JN391441_p140 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 73151 | 73510 |
| AEL21871.1 | JN391441_p138 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 72715 | 72918 |
| AEL21897.1 | JN391441_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34119 | 34382 |
| AEL21901.1 | JN391441_p31 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28435 | 28620 |
| AEL21852.1 | JN391441_p110 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 63590 | 64375 |
| AEL21867.1 | JN391441_p142 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 73883 | 74104 |
| AEL21788.1 | JN391441_p30 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28020 | 28448 |
| AEL21812.1 | JN391441_p70 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 45654 | 45965 |
| AEL21809.1 | JN391441_p67 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43571 | 44539 |
| AEL21881.1 | JN391441_p128 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 69496 | 69960 |
| AEL21827.1 | JN391441_p85 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51395 | 51760 |
| AEL21810.1 | JN391441_p68 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 44536 | 44946 |
| AEL21828.1 | JN391441_p86 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51757 | 52119 |
| AEL21769.1 | JN391441_p11 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4170 | 5726 |
| AEL21895.1 | JN391441_p44 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 34780 | 34953 |
| AEL21902.1 | JN391441_p8 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1927 | 2235 |
| AEL21898.1 | JN391441_p41 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 33658 | 34122 |
| AEL21777.1 | JN391441_p19 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 10315 | 11289 |
| AEL21889.1 | JN391441_p50 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 35851 | 36252 |
| AEL21776.1 | JN391441_p18 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 9884 | 10288 |
| AEL21862.1 | JN391441_p120 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 67085 | 67210 |
| AEL21783.1 | JN391441_p25 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 19216 | 20895 |
| AEL21822.1 | JN391441_p80 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49162 | 49509 |
| AEL21893.1 | JN391441_p46 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35078 | 35245 |
| AEL21821.1 | JN391441_p79 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 48530 | 49180 |
| AEL21865.1 | JN391441_p123 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 67528 | 67662 |
| AEL21770.1 | JN391441_p12 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 5729 | 6730 |
| AEL21804.1 | JN391441_p62 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42219 | 42326 |
| AEL21824.1 | JN391441_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50761 | 50949 |
| AEL21780.1 | JN391441_p22 | tail assembly chaperone | phrog_15493 | tail assembly chaperone | tail | 1 | 12347 | 12814 |
| AEL21863.1 | JN391441_p121 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 67207 | 67386 |
| AEL21808.1 | JN391441_p66 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43245 | 43574 |
| AEL21763.1 | JN391441_p3 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 557 | 742 |
| AEL21860.1 | JN391441_p118 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 66725 | 66892 |
| AEL21848.1 | JN391441_p106 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62156 | 62452 |
| AEL21894.1 | JN391441_p45 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 34950 | 35078 |
| AEL21886.1 | JN391441_p55 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39197 | 39637 |
| AEL21850.1 | JN391441_p108 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 62723 | 63097 |
| AEL21855.1 | JN391441_p113 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 65581 | 65718 |
| AEL21859.1 | JN391441_p117 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 66315 | 66728 |
| AEL21792.1 | JN391441_p35 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 30993 | 31331 |
| AEL21857.1 | JN391441_p115 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 65871 | 66083 |
| AEL21778.1 | JN391441_p20 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11349 | 11822 |
| AEL21803.1 | JN391441_p61 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 41895 | 42200 |
| AEL21872.1 | JN391441_p137 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 72482 | 72709 |
| AEL21829.1 | JN391441_p87 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52116 | 52310 |