Genomic map of Mycobacterium phage Jebeks (JN572061)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN572061
Definition
Mycobacterium phage Jebeks, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; Mycobacterium virus Jebeks.
DB of origin
PVOG
Length
45580
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
67.25
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVD98083.1 JN572061_p45 hypothetical protein phrog_4702 unknown function unknown function 1 31528 31680
AVD98090.1 JN572061_p52 hypothetical protein phrog_3821 unknown function unknown function 1 35670 35948
AVD98045.1 JN572061_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6243 6590
AVD98096.1 JN572061_p58 hypothetical protein phrog_5921 unknown function unknown function 1 38554 38700
AVD98112.1 JN572061_p74 hypothetical protein phrog_7285 unknown function unknown function 1 44736 44984
AVD98080.1 JN572061_p42 hypothetical protein phrog_5559 unknown function unknown function 1 31066 31245
AVD98108.1 JN572061_p70 hypothetical protein phrog_10254 unknown function unknown function 1 43354 43545
AVD98052.1 JN572061_p14 major tail protein phrog_476 major tail protein tail 1 8819 9817
AVD98072.1 JN572061_p34 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 27924 28790
AVD98100.1 JN572061_p62 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 39208 40206
AVD98089.1 JN572061_p51 hypothetical protein phrog_6109 unknown function unknown function 1 35431 35673
AVD98107.1 JN572061_p69 hypothetical protein phrog_4550 unknown function unknown function 1 43184 43357
AVD98067.1 JN572061_p29 hypothetical protein phrog_404 minor tail protein tail 1 25470 25829
AVD98085.1 JN572061_p47 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32603 33595
AVD98095.1 JN572061_p57 hypothetical protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 37968 38561
AVD98068.1 JN572061_p30 integrase phrog_1 integrase integration and excision -1 25903 26796
AVD98099.1 JN572061_p61 hypothetical protein phrog_2451 unknown function unknown function 1 39070 39204
AVD98064.1 JN572061_p26 lysin A phrog_6707 endolysin lysis 1 23105 24040
AVD98092.1 JN572061_p54 hypothetical protein phrog_7789 unknown function unknown function 1 37214 37303
AVD98093.1 JN572061_p55 hypothetical protein phrog_8769 methyltransferase other 1 37326 37529
AVD98073.1 JN572061_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28787 29086
AVD98057.1 JN572061_p19 minor tail protein phrog_110 minor tail protein tail 1 16370 18106
AVD98063.1 JN572061_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22864 23034
AVD98043.1 JN572061_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4896 5261
AVD98088.1 JN572061_p50 RusA phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34934 35437
AVD98059.1 JN572061_p21 minor tail protein phrog_3493 minor tail protein tail 1 19023 21284
AVD98055.1 JN572061_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10858 14628
AVD98106.1 JN572061_p68 hypothetical protein phrog_2202 unknown function unknown function 1 42861 43187
AVD98042.1 JN572061_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3560 4894
AVD98039.1 JN572061_p1 small terminase subunit phrog_1496 terminase small subunit head and packaging 1 55 444
AVD98070.1 JN572061_p32 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27461 27694
AVD98046.1 JN572061_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6594 6956
AVD98097.1 JN572061_p59 hypothetical protein phrog_1311 unknown function unknown function 1 38700 38804
AVD98062.1 JN572061_p24 hypothetical protein phrog_240 head protein head and packaging 1 22502 22864
AVD98058.1 JN572061_p20 minor tail protein phrog_732 minor tail protein tail 1 18129 19022
AVD98041.1 JN572061_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3569
AVD98084.1 JN572061_p46 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31677 32606
AVD98105.1 JN572061_p67 hypothetical protein phrog_7429 unknown function unknown function 1 42585 42797
AVD98098.1 JN572061_p60 hypothetical protein phrog_11096 unknown function unknown function 1 38801 39073
AVD98079.1 JN572061_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30797 31069
AVD98065.1 JN572061_p27 lysin B phrog_102 endolysin lysis 1 24037 25203
AVD98109.1 JN572061_p71 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 43554 43727
AVD98094.1 JN572061_p56 hypothetical protein phrog_2060 DNA methyltransferase other 1 37603 37971
AVD98071.1 JN572061_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27691 27927
AVD98101.1 JN572061_p63 hypothetical protein phrog_3599 unknown function unknown function 1 40203 40733
AVD98040.1 JN572061_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
AVD98103.1 JN572061_p65 hypothetical protein phrog_908 unknown function unknown function 1 40993 41895
AVD98056.1 JN572061_p18 minor tail protein phrog_106 minor tail protein tail 1 14625 16370
AVD98049.1 JN572061_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7644 7913
AVD98081.1 JN572061_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31242 31373
AVD98076.1 JN572061_p38 hypothetical protein phrog_658 unknown function unknown function 1 29792 30295
AVD98082.1 JN572061_p44 hypothetical protein singleton unknown function unknown function 1 31370 31531
AVD98102.1 JN572061_p64 hypothetical protein phrog_7254 unknown function unknown function 1 40730 40996
AVD98060.1 JN572061_p22 minor tail protein phrog_416 minor tail protein tail 1 21284 22321
AVD98048.1 JN572061_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7321 7644
AVD98078.1 JN572061_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30525 30800
AVD98047.1 JN572061_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6956 7306
AVD98111.1 JN572061_p73 hypothetical protein phrog_1186 unknown function unknown function 1 44381 44749
AVD98044.1 JN572061_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5299 6243
AVD98069.1 JN572061_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26931 27332
AVD98075.1 JN572061_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29328 29729
AVD98054.1 JN572061_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9926 10516
AVD98054.1 JN572061_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 10518 10844
AVD98113.1 JN572061_p75 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44989 45372
AVD98077.1 JN572061_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30295 30528
AVD98104.1 JN572061_p66 hypothetical protein phrog_5855 unknown function unknown function 1 42009 42509
AVD98066.1 JN572061_p28 hypothetical protein phrog_443 holin lysis 1 25225 25473
AVD98061.1 JN572061_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22336 22485
AVD98050.1 JN572061_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7913 8290
AVD98051.1 JN572061_p13 hypothetical protein phrog_813 head-tail adaptor connector 1 8287 8724
AVD98074.1 JN572061_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29083 29331
AVD98087.1 JN572061_p49 FtsK phrog_6152 unknown function unknown function 1 33870 34937
AVD98053.1 JN572061_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9926 10525
AVD98110.1 JN572061_p72 hypothetical protein phrog_6617 unknown function unknown function 1 43926 44384
AVD98091.1 JN572061_p53 DNA methylase phrog_67 DNA methyltransferase other 1 35945 37138
AVD98086.1 JN572061_p48 hypothetical protein phrog_4387 unknown function unknown function 1 33592 33873