| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN572061 |
Definition |
Mycobacterium phage Jebeks, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; Mycobacterium virus Jebeks. |
DB of origin |
PVOG |
Length |
45580 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
67.25 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVD98083.1 | JN572061_p45 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31528 | 31680 |
| AVD98090.1 | JN572061_p52 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 35670 | 35948 |
| AVD98045.1 | JN572061_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6243 | 6590 |
| AVD98096.1 | JN572061_p58 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 38554 | 38700 |
| AVD98112.1 | JN572061_p74 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 44736 | 44984 |
| AVD98080.1 | JN572061_p42 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 31066 | 31245 |
| AVD98108.1 | JN572061_p70 | hypothetical protein | phrog_10254 | unknown function | unknown function | 1 | 43354 | 43545 |
| AVD98052.1 | JN572061_p14 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8819 | 9817 |
| AVD98072.1 | JN572061_p34 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27924 | 28790 |
| AVD98100.1 | JN572061_p62 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 39208 | 40206 |
| AVD98089.1 | JN572061_p51 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 35431 | 35673 |
| AVD98107.1 | JN572061_p69 | hypothetical protein | phrog_4550 | unknown function | unknown function | 1 | 43184 | 43357 |
| AVD98067.1 | JN572061_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25470 | 25829 |
| AVD98085.1 | JN572061_p47 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32603 | 33595 |
| AVD98095.1 | JN572061_p57 | hypothetical protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37968 | 38561 |
| AVD98068.1 | JN572061_p30 | integrase | phrog_1 | integrase | integration and excision | -1 | 25903 | 26796 |
| AVD98099.1 | JN572061_p61 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 39070 | 39204 |
| AVD98064.1 | JN572061_p26 | lysin A | phrog_6707 | endolysin | lysis | 1 | 23105 | 24040 |
| AVD98092.1 | JN572061_p54 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 37214 | 37303 |
| AVD98093.1 | JN572061_p55 | hypothetical protein | phrog_8769 | methyltransferase | other | 1 | 37326 | 37529 |
| AVD98073.1 | JN572061_p35 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28787 | 29086 |
| AVD98057.1 | JN572061_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16370 | 18106 |
| AVD98063.1 | JN572061_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22864 | 23034 |
| AVD98043.1 | JN572061_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4896 | 5261 |
| AVD98088.1 | JN572061_p50 | RusA | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34934 | 35437 |
| AVD98059.1 | JN572061_p21 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19023 | 21284 |
| AVD98055.1 | JN572061_p17 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10858 | 14628 |
| AVD98106.1 | JN572061_p68 | hypothetical protein | phrog_2202 | unknown function | unknown function | 1 | 42861 | 43187 |
| AVD98042.1 | JN572061_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3560 | 4894 |
| AVD98039.1 | JN572061_p1 | small terminase subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 55 | 444 |
| AVD98070.1 | JN572061_p32 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 27461 | 27694 |
| AVD98046.1 | JN572061_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6594 | 6956 |
| AVD98097.1 | JN572061_p59 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 38700 | 38804 |
| AVD98062.1 | JN572061_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22502 | 22864 |
| AVD98058.1 | JN572061_p20 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 18129 | 19022 |
| AVD98041.1 | JN572061_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2106 | 3569 |
| AVD98084.1 | JN572061_p46 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31677 | 32606 |
| AVD98105.1 | JN572061_p67 | hypothetical protein | phrog_7429 | unknown function | unknown function | 1 | 42585 | 42797 |
| AVD98098.1 | JN572061_p60 | hypothetical protein | phrog_11096 | unknown function | unknown function | 1 | 38801 | 39073 |
| AVD98079.1 | JN572061_p41 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 30797 | 31069 |
| AVD98065.1 | JN572061_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 24037 | 25203 |
| AVD98109.1 | JN572061_p71 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 43554 | 43727 |
| AVD98094.1 | JN572061_p56 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 37603 | 37971 |
| AVD98071.1 | JN572061_p33 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 27691 | 27927 |
| AVD98101.1 | JN572061_p63 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 40203 | 40733 |
| AVD98040.1 | JN572061_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 413 | 2089 |
| AVD98103.1 | JN572061_p65 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 40993 | 41895 |
| AVD98056.1 | JN572061_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14625 | 16370 |
| AVD98049.1 | JN572061_p11 | hypothetical protein | phrog_4307 | unknown function | unknown function | 1 | 7644 | 7913 |
| AVD98081.1 | JN572061_p43 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 31242 | 31373 |
| AVD98076.1 | JN572061_p38 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29792 | 30295 |
| AVD98082.1 | JN572061_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31370 | 31531 |
| AVD98102.1 | JN572061_p64 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 40730 | 40996 |
| AVD98060.1 | JN572061_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21284 | 22321 |
| AVD98048.1 | JN572061_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7321 | 7644 |
| AVD98078.1 | JN572061_p40 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 30525 | 30800 |
| AVD98047.1 | JN572061_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6956 | 7306 |
| AVD98111.1 | JN572061_p73 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 44381 | 44749 |
| AVD98044.1 | JN572061_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5299 | 6243 |
| AVD98069.1 | JN572061_p31 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 26931 | 27332 |
| AVD98075.1 | JN572061_p37 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 29328 | 29729 |
| AVD98054.1 | JN572061_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9926 | 10516 |
| AVD98054.1 | JN572061_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 10518 | 10844 |
| AVD98113.1 | JN572061_p75 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44989 | 45372 |
| AVD98077.1 | JN572061_p39 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 30295 | 30528 |
| AVD98104.1 | JN572061_p66 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 42009 | 42509 |
| AVD98066.1 | JN572061_p28 | hypothetical protein | phrog_443 | holin | lysis | 1 | 25225 | 25473 |
| AVD98061.1 | JN572061_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22336 | 22485 |
| AVD98050.1 | JN572061_p12 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7913 | 8290 |
| AVD98051.1 | JN572061_p13 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 8287 | 8724 |
| AVD98074.1 | JN572061_p36 | hypothetical protein | phrog_9041 | unknown function | unknown function | 1 | 29083 | 29331 |
| AVD98087.1 | JN572061_p49 | FtsK | phrog_6152 | unknown function | unknown function | 1 | 33870 | 34937 |
| AVD98053.1 | JN572061_p16 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9926 | 10525 |
| AVD98110.1 | JN572061_p72 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 43926 | 44384 |
| AVD98091.1 | JN572061_p53 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 35945 | 37138 |
| AVD98086.1 | JN572061_p48 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33592 | 33873 |