Genomic map of Mycobacterium phage Arbiter (JN618996)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN618996
Definition
Mycobacterium phage Arbiter, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; unclassified Rosebushvirus.
DB of origin
PVOG
Length
67169
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
88
%GC
68.9
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEN79524.1 JN618996_p21 major tail subunit phrog_792 major tail protein tail 1 17666 18742
AEN79535.1 JN618996_p34 hypothetical protein phrog_240 head protein head and packaging 1 33966 34355
AEN79515.1 JN618996_p12 hypothetical protein phrog_776 portal protein head and packaging 1 7818 9707
AEN79505.1 JN618996_p1 transcriptional regulator phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 792
AEN79586.1 JN618996_p48 hypothetical protein phrog_870 unknown function unknown function -1 43037 43576
AEN79555.1 JN618996_p86 hypothetical protein phrog_7256 unknown function unknown function -1 65580 65957
AEN79568.1 JN618996_p73 hypothetical protein phrog_7367 unknown function unknown function -1 60461 60772
AEN79507.1 JN618996_p3 ExsB/QueC-like protein phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover 1 1916 2623
AEN79539.1 JN618996_p38 hypothetical protein phrog_3329 unknown function unknown function 1 36151 37464
AEN79541.1 JN618996_p40 hypothetical protein phrog_941 unknown function unknown function 1 37812 38177
AEN79530.1 JN618996_p29 tapemeasure protein phrog_934 tail length tape measure protein tail 1 21916 27555
AEN79554.1 JN618996_p87 hypothetical protein phrog_6718 unknown function unknown function -1 65960 66151
AEN79536.1 JN618996_p35 hypothetical protein phrog_948 unknown function unknown function 1 34364 34753
AEN79532.1 JN618996_p31 minor tail protein phrog_837 minor tail protein tail 1 29003 30052
AEN79590.1 JN618996_p23 hypothetical protein phrog_1318 unknown function unknown function -1 18915 19106
AEN79581.1 JN618996_p53 hypothetical protein phrog_1371 unknown function unknown function -1 47239 47730
AEN79577.1 JN618996_p57 hypothetical protein phrog_3025 unknown function unknown function -1 52586 52966
AEN79534.1 JN618996_p33 minor tail protein phrog_416 minor tail protein tail 1 32772 33935
AEN79567.1 JN618996_p74 hypothetical protein phrog_8341 unknown function unknown function -1 60835 61080
AEN79588.1 JN618996_p44 HTH DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39549 39938
AEN79511.1 JN618996_p7 terminase phrog_38 terminase large subunit head and packaging 1 4320 6014
AEN79589.1 JN618996_p43 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39312 39491
AEN79540.1 JN618996_p39 hypothetical protein phrog_915 unknown function unknown function 1 37495 37851
AEN79552.1 JN618996_p67 hypothetical protein phrog_928 unknown function unknown function 1 57808 58521
AEN79556.1 JN618996_p85 hypothetical protein phrog_8227 unknown function unknown function -1 65446 65583
AEN79573.1 JN618996_p68 hypothetical protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 58752 59054
AEN79563.1 JN618996_p78 hypothetical protein phrog_1933 unknown function unknown function -1 62121 62333
AEN79564.1 JN618996_p77 hypothetical protein phrog_8500 unknown function unknown function -1 61958 62119
AEN79546.1 JN618996_p61 hypothetical protein phrog_996 unknown function unknown function 1 54813 55559
AEN79506.1 JN618996_p2 hypothetical protein phrog_7068 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 789 1919
AEN79582.1 JN618996_p52 hypothetical protein phrog_3892 unknown function unknown function -1 46904 47239
AEN79512.1 JN618996_p9 RuvC-like protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6447 7139
AEN79517.1 JN618996_p14 hypothetical protein phrog_2069 unknown function unknown function 1 12154 12327
AEN79566.1 JN618996_p75 hypothetical protein phrog_7525 unknown function unknown function -1 61178 61486
AEN79509.1 JN618996_p5 QueE-like protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 3048 3761
AEN79560.1 JN618996_p81 hypothetical protein phrog_1010 unknown function unknown function -1 63221 63817
AEN79513.1 JN618996_p10 hypothetical protein phrog_7710 unknown function unknown function 1 7136 7456
AEN79565.1 JN618996_p76 hypothetical protein phrog_7479 unknown function unknown function -1 61543 61968
AEN79579.1 JN618996_p55 hypothetical protein phrog_2526 unknown function unknown function -1 50593 50757
AEN79557.1 JN618996_p84 hypothetical protein phrog_7689 unknown function unknown function -1 65303 65449
AEN79584.1 JN618996_p50 type III restriction protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 44955 46670
AEN79547.1 JN618996_p62 hypothetical protein phrog_1016 unknown function unknown function 1 55569 55829
AEN79550.1 JN618996_p65 hypothetical protein phrog_1031 unknown function unknown function 1 56863 57387
AEN79553.1 JN618996_p88 hypothetical protein phrog_7435 unknown function unknown function -1 66247 67005
AEN79543.1 JN618996_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38620 39315
AEN79578.1 JN618996_p56 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50760 52589
AEN79587.1 JN618996_p45 hypothetical protein phrog_636 unknown function unknown function -1 40013 40777
AEN79527.1 JN618996_p26 hypothetical protein phrog_901 unknown function unknown function 1 20568 20921
AEN79583.1 JN618996_p51 hypothetical protein phrog_7912 unknown function unknown function -1 46741 46902
AEN79571.1 JN618996_p70 hypothetical protein phrog_7876 unknown function unknown function -1 59369 59863
AEN79522.1 JN618996_p19 hypothetical protein phrog_2344 unknown function unknown function 1 16765 17247
AEN79510.1 JN618996_p6 FolE-like protein phrog_2197 GTP cyclohydrolase other 1 3761 4336
AEN79521.1 JN618996_p18 hypothetical protein phrog_2272 unknown function unknown function 1 16226 16768
AEN79518.1 JN618996_p15 major capsid protein phrog_777 major head protein head and packaging 1 12501 14528
AEN79548.1 JN618996_p63 hypothetical protein phrog_7544 unknown function unknown function 1 55861 56202
AEN79574.1 JN618996_p60 hypothetical protein phrog_982 unknown function unknown function -1 54182 54484
AEN79526.1 JN618996_p25 hypothetical protein phrog_810 unknown function unknown function 1 19999 20559
AEN79558.1 JN618996_p83 hypothetical protein phrog_2972 unknown function unknown function -1 64973 65266
AEN79559.1 JN618996_p82 hypothetical protein phrog_1221 unknown function unknown function -1 63828 64898
AEN79508.1 JN618996_p4 6-pyruvoyl tetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 2620 3051
AEN79549.1 JN618996_p64 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 56199 56852
AEN79538.1 JN618996_p37 hypothetical protein phrog_282 unknown function unknown function 1 35555 36154
AEN79544.1 JN618996_p46 lysin A phrog_317 endolysin lysis 1 40873 42384
AEN79516.1 JN618996_p13 portal protein phrog_859 portal protein head and packaging 1 9707 12154
AEN79529.1 JN618996_p28 hypothetical protein phrog_6941 unknown function unknown function 1 21405 21890
AEN79537.1 JN618996_p36 hypothetical protein phrog_282 unknown function unknown function 1 34765 35409
AEN79561.1 JN618996_p80 hypothetical protein phrog_7394 unknown function unknown function -1 62890 63111
AEN79545.1 JN618996_p47 hypothetical protein phrog_526 holin lysis 1 42384 42920
AEN79523.1 JN618996_p20 hypothetical protein phrog_2525 unknown function unknown function 1 17244 17576
AEN79585.1 JN618996_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43591 44958
AEN79592.1 JN618996_p8 hypothetical protein phrog_5935 unknown function unknown function -1 6011 6481
AEN79570.1 JN618996_p71 hypothetical protein phrog_8177 unknown function unknown function -1 59878 60156
AEN79576.1 JN618996_p58 hypothetical protein phrog_993 unknown function unknown function -1 52963 53454
AEN79572.1 JN618996_p69 hypothetical protein phrog_2089 unknown function unknown function -1 59148 59393
AEN79575.1 JN618996_p59 hypothetical protein phrog_3835 unknown function unknown function -1 53451 53921
AEN79525.1 JN618996_p24 hypothetical protein phrog_783 head-tail adaptor connector 1 19385 20002
AEN79562.1 JN618996_p79 hypothetical protein phrog_6719 unknown function unknown function -1 62330 62824
AEN79542.1 JN618996_p41 hypothetical protein phrog_892 tail fiber protein tail 1 38215 38619
AEN79531.1 JN618996_p30 minor tail protein phrog_838 unknown function unknown function 1 27564 29000
AEN79551.1 JN618996_p66 hypothetical protein phrog_7186 unknown function unknown function 1 57479 57811
AEN79533.1 JN618996_p32 minor tail protein phrog_346 minor tail protein tail 1 30049 32769
AEN79528.1 JN618996_p27 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20921 21349
AEN79591.1 JN618996_p22 hypothetical protein phrog_7051 unknown function unknown function -1 18802 18915
AEN79580.1 JN618996_p54 DNA primase/helicase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 47795 50548
AEN79569.1 JN618996_p72 hypothetical protein phrog_7463 unknown function unknown function -1 60153 60464
AEN79514.1 JN618996_p11 hypothetical protein phrog_781 unknown function unknown function 1 7453 7791
AEN79519.1 JN618996_p16 hypothetical protein phrog_779 unknown function unknown function 1 14622 15440
AEN79520.1 JN618996_p17 hypothetical protein phrog_970 unknown function unknown function 1 15440 16189