Genomic map of Mycobacterium phage Hedgerow (JN698991)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN698991
Definition
Mycobacterium phage Hedgerow, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; Mycobacterium virus Rosebush.
DB of origin
PVOG
Length
67451
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
68.95
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AER47256.1 JN698991_p24 hypothetical protein phrog_783 head-tail adaptor connector 1 19232 20017
AER47322.1 JN698991_p92 hypothetical protein phrog_7435 unknown function unknown function -1 66532 67287
AER47300.1 JN698991_p69 hypothetical protein phrog_928 unknown function unknown function 1 57774 58487
AER47292.1 JN698991_p61 hypothetical protein phrog_982 unknown function unknown function -1 54168 54470
AER47317.1 JN698991_p87 hypothetical protein phrog_7689 unknown function unknown function -1 65277 65423
AER47310.1 JN698991_p79 hypothetical protein phrog_7479 unknown function unknown function -1 61510 61941
AER47278.1 JN698991_p47 lysin A phrog_317 endolysin lysis 1 40909 42408
AER47253.1 JN698991_p21 major tail subunit phrog_792 major tail protein tail 1 17678 18757
AER47261.1 JN698991_p29 tapemeasure protein phrog_934 tail length tape measure protein tail 1 21931 27579
AER47290.1 JN698991_p59 hypothetical protein phrog_993 unknown function unknown function -1 52990 53478
AER47234.1 JN698991_p2 hypothetical protein phrog_7068 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 789 1928
AER47295.1 JN698991_p64 hypothetical protein phrog_1016 unknown function unknown function 1 55555 55815
AER47308.1 JN698991_p77 hypothetical protein phrog_8341 unknown function unknown function -1 60802 61047
AER47266.1 JN698991_p34 hypothetical protein phrog_240 head protein head and packaging 1 33990 34379
AER47282.1 JN698991_p51 type III restriction helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 44979 46694
AER47318.1 JN698991_p88 hypothetical protein phrog_8227 unknown function unknown function -1 65420 65557
AER47249.1 JN698991_p17 hypothetical protein phrog_970 unknown function unknown function 1 15452 16201
AER47281.1 JN698991_p50 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43615 44982
AER47291.1 JN698991_p60 hypothetical protein phrog_3835 unknown function unknown function -1 53475 53915
AER47236.1 JN698991_p4 6-pyruvoyl tetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 2629 3060
AER47298.1 JN698991_p67 hypothetical protein phrog_1031 unknown function unknown function 1 56820 57353
AER47264.1 JN698991_p32 minor tail protein phrog_346 minor tail protein tail 1 30073 32793
AER47307.1 JN698991_p76 hypothetical protein phrog_7367 unknown function unknown function -1 60428 60739
AER47302.1 JN698991_p71 hypothetical protein phrog_4461 unknown function unknown function -1 59007 59111
AER47233.1 JN698991_p1 transcriptional regulator phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 792
AER47263.1 JN698991_p31 minor tail protein phrog_837 minor tail protein tail 1 29027 30076
AER47285.1 JN698991_p54 hypothetical protein phrog_1371 unknown function unknown function -1 47263 47754
AER47301.1 JN698991_p70 hypothetical protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 58718 59020
AER47294.1 JN698991_p63 hypothetical protein phrog_996 unknown function unknown function 1 54844 55545
AER47313.1 JN698991_p83 hypothetical protein phrog_7394 unknown function unknown function -1 62864 63085
AER47289.1 JN698991_p58 hypothetical protein phrog_3025 unknown function unknown function -1 52613 52996
AER47270.1 JN698991_p39 hypothetical protein phrog_3329 unknown function unknown function 1 36175 37488
AER47306.1 JN698991_p75 hypothetical protein phrog_7463 unknown function unknown function -1 60123 60431
AER47241.1 JN698991_p9 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6573 7148
AER47257.1 JN698991_p25 hypothetical protein phrog_810 unknown function unknown function 1 20014 20574
AER47275.1 JN698991_p44 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39336 39542
AER47265.1 JN698991_p33 minor tail protein phrog_416 minor tail protein tail 1 32796 33959
AER47255.1 JN698991_p23 hypothetical protein phrog_1318 unknown function unknown function -1 18930 19121
AER47304.1 JN698991_p73 hypothetical protein phrog_7876 unknown function unknown function -1 59329 59823
AER47312.1 JN698991_p82 hypothetical protein phrog_6719 unknown function unknown function -1 62303 62797
AER47280.1 JN698991_p49 hypothetical protein phrog_870 unknown function unknown function -1 43061 43600
AER47286.1 JN698991_p55 primase/helicase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 47819 50575
AER47262.1 JN698991_p30 minor tail protein phrog_838 unknown function unknown function 1 27588 29024
AER47239.1 JN698991_p7 terminase phrog_38 terminase large subunit head and packaging 1 4329 6023
AER47321.1 JN698991_p91 hypothetical protein phrog_6718 unknown function unknown function -1 66245 66436
AER47245.1 JN698991_p13 portal protein phrog_859 portal protein head and packaging 1 9716 12163
AER47305.1 JN698991_p74 hypothetical protein singleton unknown function unknown function -1 59838 60080
AER47274.1 JN698991_p43 structural protein phrog_2804 virion structural protein head and packaging 1 38644 39339
AER47279.1 JN698991_p48 holin phrog_526 holin lysis 1 42408 42944
AER47259.1 JN698991_p27 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 20936 21364
AER47235.1 JN698991_p3 QueC phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover 1 1925 2632
AER47320.1 JN698991_p90 hypothetical protein phrog_9162 unknown function unknown function -1 65883 66242
AER47244.1 JN698991_p12 hypothetical protein phrog_776 portal protein head and packaging 1 7827 9716
AER47252.1 JN698991_p20 hypothetical protein phrog_2525 unknown function unknown function 1 17256 17588
AER47324.1 JN698991_p80 hypothetical protein phrog_8500 unknown function unknown function -1 61931 62092
AER47296.1 JN698991_p65 hypothetical protein phrog_7544 unknown function unknown function 1 55827 56168
AER47260.1 JN698991_p28 tail assembly chaperone phrog_6941 unknown function unknown function 1 21420 21905
AER47272.1 JN698991_p41 hypothetical protein phrog_941 unknown function unknown function 1 37836 38201
AER47277.1 JN698991_p46 hypothetical protein phrog_636 unknown function unknown function -1 40037 40801
AER47284.1 JN698991_p53 hypothetical protein phrog_3892 unknown function unknown function -1 46928 47263
AER47258.1 JN698991_p26 hypothetical protein phrog_901 unknown function unknown function 1 20583 20936
AER47271.1 JN698991_p40 hypothetical protein phrog_915 unknown function unknown function 1 37519 37875
AER47243.1 JN698991_p11 hypothetical protein phrog_781 unknown function unknown function 1 7462 7800
AER47251.1 JN698991_p19 hypothetical protein phrog_2344 unknown function unknown function 1 16777 17259
AER47250.1 JN698991_p18 hypothetical protein phrog_2272 unknown function unknown function 1 16238 16780
AER47323.1 JN698991_p37 hypothetical protein singleton unknown function unknown function 1 35457 35582
AER47254.1 JN698991_p22 hypothetical protein phrog_7051 unknown function unknown function -1 18817 18930
AER47315.1 JN698991_p85 hypothetical protein phrog_1221 unknown function unknown function -1 63802 64872
AER47288.1 JN698991_p57 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50787 52616
AER47267.1 JN698991_p35 hypothetical protein phrog_948 unknown function unknown function 1 34388 34777
AER47299.1 JN698991_p68 hypothetical protein phrog_7186 unknown function unknown function 1 57394 57777
AER47287.1 JN698991_p56 hypothetical protein phrog_2526 unknown function unknown function -1 50620 50784
AER47303.1 JN698991_p72 hypothetical protein phrog_2089 unknown function unknown function -1 59108 59353
AER47276.1 JN698991_p45 hypothetical protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39573 39962
AER47309.1 JN698991_p78 hypothetical protein phrog_7525 unknown function unknown function -1 61145 61462
AER47238.1 JN698991_p6 FolE phrog_2197 GTP cyclohydrolase other 1 3770 4345
AER47316.1 JN698991_p86 hypothetical protein phrog_2972 unknown function unknown function -1 64947 65240
AER47297.1 JN698991_p66 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 56165 56818
AER47269.1 JN698991_p38 hypothetical protein phrog_282 unknown function unknown function 1 35579 36178
AER47242.1 JN698991_p10 hypothetical protein phrog_7710 unknown function unknown function 1 7145 7465
AER47314.1 JN698991_p84 hypothetical protein phrog_1010 unknown function unknown function -1 63195 63791
AER47240.1 JN698991_p8 hypothetical protein phrog_5935 unknown function unknown function -1 6020 6490
AER47248.1 JN698991_p16 hypothetical protein phrog_779 unknown function unknown function 1 14634 15452
AER47246.1 JN698991_p14 hypothetical protein phrog_2069 unknown function unknown function 1 12163 12336
AER47319.1 JN698991_p89 hypothetical protein phrog_7256 unknown function unknown function -1 65554 65886
AER47283.1 JN698991_p52 hypothetical protein phrog_7912 unknown function unknown function -1 46765 46926
AER47247.1 JN698991_p15 major capsid protein phrog_777 major head protein head and packaging 1 12510 14540
AER47311.1 JN698991_p81 hypothetical protein phrog_1933 unknown function unknown function -1 62094 62306
AER47237.1 JN698991_p5 QueU phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 3057 3770
AER47293.1 JN698991_p62 hypothetical protein phrog_8754 unknown function unknown function 1 54588 54857
AER47273.1 JN698991_p42 structural protein phrog_892 tail fiber protein tail 1 38227 38643
AER47268.1 JN698991_p36 hypothetical protein phrog_282 unknown function unknown function 1 34789 35433