| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN699014 |
Definition |
Mycobacterium phage Nova, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dclasvirinae; Plotvirus; Mycobacterium virus Plot. |
DB of origin |
PVOG |
Length |
65108 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
88 |
%GC |
59.67 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AER49814.1 | JN699014_p61 | hypothetical protein | phrog_8720 | unknown function | unknown function | 1 | 46935 | 47738 |
| AER49835.1 | JN699014_p82 | hypothetical protein | phrog_10449 | unknown function | unknown function | 1 | 59657 | 59965 |
| AER49830.1 | JN699014_p77 | RDF protein | phrog_10149 | unknown function | unknown function | 1 | 57741 | 58310 |
| AER49776.1 | JN699014_p23 | hypothetical protein | phrog_5278 | unknown function | unknown function | 1 | 14799 | 14999 |
| AER49820.1 | JN699014_p67 | hypothetical protein | phrog_10638 | unknown function | unknown function | 1 | 53546 | 54067 |
| AER49766.1 | JN699014_p13 | minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 9215 | 10120 |
| AER49754.1 | JN699014_p1 | hypothetical protein | phrog_5460 | unknown function | unknown function | 1 | 1 | 309 |
| AER49777.1 | JN699014_p24 | major tail subunit | phrog_4971 | major tail protein | tail | 1 | 14989 | 15831 |
| AER49800.1 | JN699014_p47 | HNH protein | phrog_13277 | unknown function | unknown function | 1 | 38630 | 38737 |
| AER49760.1 | JN699014_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4250 | 5014 |
| AER49837.1 | JN699014_p84 | HNH protein | phrog_780 | unknown function | unknown function | 1 | 60248 | 60664 |
| AER49784.1 | JN699014_p31 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 27013 | 29061 |
| AER49757.1 | JN699014_p4 | hypothetical protein | phrog_10761 | unknown function | unknown function | 1 | 1781 | 1945 |
| AER49759.1 | JN699014_p6 | hypothetical protein | phrog_11599 | unknown function | unknown function | 1 | 2145 | 4253 |
| AER49806.1 | JN699014_p53 | hypothetical protein | phrog_10722 | unknown function | unknown function | 1 | 42123 | 42404 |
| AER49831.1 | JN699014_p78 | hypothetical protein | phrog_10814 | unknown function | unknown function | 1 | 58327 | 58848 |
| AER49769.1 | JN699014_p16 | capsid protein | phrog_3990 | major head protein | head and packaging | 1 | 11308 | 12519 |
| AER49802.1 | JN699014_p49 | hypothetical protein | phrog_5307 | unknown function | unknown function | 1 | 38970 | 39560 |
| AER49810.1 | JN699014_p57 | hypothetical protein | phrog_8491 | unknown function | unknown function | 1 | 44743 | 44931 |
| AER49819.1 | JN699014_p66 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 50242 | 53544 |
| AER49775.1 | JN699014_p22 | hypothetical protein | phrog_10150 | unknown function | unknown function | 1 | 14431 | 14787 |
| AER49772.1 | JN699014_p19 | hypothetical protein | phrog_4904 | unknown function | unknown function | 1 | 13216 | 13623 |
| AER49781.1 | JN699014_p28 | hypothetical protein | phrog_7161 | minor tail protein | tail | 1 | 21571 | 23091 |
| AER49825.1 | JN699014_p72 | hypothetical protein | phrog_10832 | unknown function | unknown function | 1 | 56219 | 56503 |
| AER49793.1 | JN699014_p40 | hypothetical protein | phrog_11465 | unknown function | unknown function | 1 | 34450 | 35031 |
| AER49838.1 | JN699014_p85 | HNH protein | phrog_11488 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60661 | 61200 |
| AER49808.1 | JN699014_p55 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 43178 | 43558 |
| AER49833.1 | JN699014_p80 | hypothetical protein | phrog_8685 | unknown function | unknown function | 1 | 59159 | 59407 |
| AER49771.1 | JN699014_p18 | hypothetical protein | phrog_5274 | unknown function | unknown function | 1 | 12887 | 13219 |
| AER49773.1 | JN699014_p20 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 13616 | 13978 |
| AER49758.1 | JN699014_p5 | hypothetical protein | phrog_12064 | unknown function | unknown function | 1 | 1955 | 2134 |
| AER49821.1 | JN699014_p68 | ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 54095 | 55195 |
| AER49797.1 | JN699014_p44 | hypothetical protein | phrog_9402 | unknown function | unknown function | 1 | 36901 | 37182 |
| AER49795.1 | JN699014_p42 | hypothetical protein | phrog_11944 | unknown function | unknown function | -1 | 36002 | 36232 |
| AER49785.1 | JN699014_p32 | structural protein | phrog_553 | minor tail protein | tail | 1 | 29061 | 29927 |
| AER49826.1 | JN699014_p73 | hypothetical protein | phrog_10494 | unknown function | unknown function | 1 | 56515 | 56775 |
| AER49839.1 | JN699014_p86 | hypothetical protein | phrog_10882 | unknown function | unknown function | 1 | 61250 | 61561 |
| AER49794.1 | JN699014_p41 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 35037 | 35918 |
| AER49829.1 | JN699014_p76 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 57289 | 57729 |
| AER49780.1 | JN699014_p27 | tapemeasure protein | phrog_6435 | tail length tape measure protein | tail | 1 | 16809 | 21581 |
| AER49818.1 | JN699014_p65 | FabG-like protein | phrog_3142 | FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase | moron, auxiliary metabolic gene and host takeover | 1 | 49406 | 50131 |
| AER49828.1 | JN699014_p75 | hypothetical protein | phrog_10394 | unknown function | unknown function | 1 | 57070 | 57285 |
| AER49778.1 | JN699014_p25 | tail assembly chaperone | phrog_4336 | tail assembly chaperone | tail | 1 | 15913 | 16566 |
| AER49813.1 | JN699014_p60 | hypothetical protein | phrog_27898 | unknown function | unknown function | 1 | 46822 | 46938 |
| AER49756.1 | JN699014_p3 | hypothetical protein | phrog_10843 | unknown function | unknown function | 1 | 1577 | 1771 |
| AER49782.1 | JN699014_p29 | hypothetical protein | phrog_1885 | minor tail protein | tail | 1 | 23088 | 24743 |
| AER49767.1 | JN699014_p14 | hypothetical protein | phrog_4866 | head scaffolding protein | head and packaging | 1 | 10153 | 10860 |
| AER49755.1 | JN699014_p2 | hypothetical protein | phrog_7407 | unknown function | unknown function | 1 | 421 | 1533 |
| AER49817.1 | JN699014_p64 | hypothetical protein | phrog_10271 | unknown function | unknown function | 1 | 48886 | 49401 |
| AER49809.1 | JN699014_p56 | hypothetical protein | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43563 | 44741 |
| AER49801.1 | JN699014_p48 | hypothetical protein | phrog_11235 | unknown function | unknown function | 1 | 38730 | 38906 |
| AER49789.1 | JN699014_p36 | hypothetical protein | phrog_9801 | unknown function | unknown function | 1 | 31677 | 31931 |
| AER49786.1 | JN699014_p33 | hypothetical protein | phrog_6443 | unknown function | unknown function | 1 | 29937 | 30257 |
| AER49799.1 | JN699014_p46 | hypothetical protein | phrog_421 | unknown function | unknown function | 1 | 37524 | 38633 |
| AER49770.1 | JN699014_p17 | hypothetical protein | phrog_5318 | unknown function | unknown function | 1 | 12516 | 12884 |
| AER49764.1 | JN699014_p11 | JAB/MPN domain protein | phrog_5556 | tail protein | tail | 1 | 8618 | 9079 |
| AER49805.1 | JN699014_p52 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 40183 | 42126 |
| AER49824.1 | JN699014_p71 | hypothetical protein | phrog_2507 | unknown function | unknown function | 1 | 55986 | 56222 |
| AER49823.1 | JN699014_p70 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 55349 | 56020 |
| AER49798.1 | JN699014_p45 | hypothetical protein | phrog_7969 | unknown function | unknown function | 1 | 37223 | 37522 |
| AER49791.1 | JN699014_p38 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32724 | 33179 |
| AER49816.1 | JN699014_p63 | methyltransferase | phrog_6636 | methyltransferase | other | 1 | 48359 | 48889 |
| AER49811.1 | JN699014_p58 | nucleotide binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44945 | 45805 |
| AER49787.1 | JN699014_p34 | hypothetical protein | phrog_3758 | virion structural protein | head and packaging | 1 | 30260 | 30688 |
| AER49804.1 | JN699014_p51 | hypothetical protein | phrog_10201 | unknown function | unknown function | 1 | 39935 | 40186 |
| AER49790.1 | JN699014_p37 | holin | phrog_8515 | unknown function | unknown function | 1 | 32201 | 32740 |
| AER49840.1 | JN699014_p87 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 61568 | 61681 |
| AER49788.1 | JN699014_p35 | lysin A | phrog_1512 | endolysin | lysis | 1 | 30697 | 31680 |
| AER49792.1 | JN699014_p39 | lysin B | phrog_102 | endolysin | lysis | 1 | 33181 | 34440 |
| AER49812.1 | JN699014_p59 | CDC45-like protein | phrog_10064 | unknown function | unknown function | 1 | 45806 | 46720 |
| AER49765.1 | JN699014_p12 | hypothetical protein | phrog_2864 | unknown function | unknown function | 1 | 9054 | 9218 |
| AER49763.1 | JN699014_p10 | hypothetical protein | phrog_1375 | unknown function | unknown function | 1 | 8409 | 8621 |
| AER49761.1 | JN699014_p8 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 5024 | 6793 |
| AER49762.1 | JN699014_p9 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 6815 | 8398 |
| AER49807.1 | JN699014_p54 | hypothetical protein | phrog_10024 | unknown function | unknown function | 1 | 42509 | 42997 |
| AER49783.1 | JN699014_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24743 | 27013 |
| AER49796.1 | JN699014_p43 | hypothetical protein | phrog_10424 | unknown function | unknown function | -1 | 36232 | 36717 |
| AER49774.1 | JN699014_p21 | hypothetical protein | phrog_4995 | unknown function | unknown function | 1 | 13975 | 14394 |
| AER49841.1 | JN699014_p88 | primase/polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 61749 | 64682 |
| AER49822.1 | JN699014_p69 | hypothetical protein | phrog_18095 | unknown function | unknown function | 1 | 55192 | 55368 |
| AER49832.1 | JN699014_p79 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 58848 | 59162 |
| AER49836.1 | JN699014_p83 | hypothetical protein | phrog_11872 | unknown function | unknown function | 1 | 59955 | 60251 |
| AER49815.1 | JN699014_p62 | deoxyribonucleotidase | phrog_415 | polynucleotide kinase | other | 1 | 47742 | 48359 |
| AER49834.1 | JN699014_p81 | hypothetical protein | phrog_25303 | unknown function | unknown function | 1 | 59400 | 59660 |
| AER49827.1 | JN699014_p74 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56760 | 57011 |
| AER49779.1 | JN699014_p26 | tail assembly chaperone | phrog_6778 | tail assembly chaperone | tail | 1 | 16535 | 16807 |
| AER49803.1 | JN699014_p50 | hypothetical protein | phrog_11197 | unknown function | unknown function | 1 | 39638 | 39877 |
| AER49768.1 | JN699014_p15 | hypothetical protein | phrog_5042 | unknown function | unknown function | 1 | 10876 | 11298 |