Genomic map of Mycobacterium phage Kamiyu (JN699018)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN699018
Definition
Mycobacterium phage Kamiyu, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
PVOG
Length
68633
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
67.47
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AER50200.1 JN699018_p69 hypothetical protein phrog_6404 unknown function unknown function 1 57490 57720
AER50168.1 JN699018_p37 hypothetical protein phrog_282 unknown function unknown function 1 34899 35498
AER50165.1 JN699018_p34 hypothetical protein phrog_240 head protein head and packaging 1 33421 33804
AER50229.1 JN699018_p98 hypothetical protein phrog_2972 unknown function unknown function -1 66994 67230
AER50226.1 JN699018_p95 hypothetical protein phrog_6469 unknown function unknown function -1 64681 65148
AER50217.1 JN699018_p86 hypothetical protein phrog_7541 unknown function unknown function -1 62154 62486
AER50221.1 JN699018_p90 hypothetical protein phrog_5355 unknown function unknown function -1 63258 63413
AER50155.1 JN699018_p24 hypothetical protein phrog_810 unknown function unknown function 1 18445 18966
AER50169.1 JN699018_p38 hypothetical protein phrog_3329 unknown function unknown function 1 35495 36844
AER50133.1 JN699018_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
AER50225.1 JN699018_p94 hypothetical protein phrog_6114 unknown function unknown function -1 64505 64684
AER50227.1 JN699018_p96 hypothetical protein phrog_1010 unknown function unknown function -1 65246 65734
AER50176.1 JN699018_p45 hypothetical protein phrog_636 unknown function unknown function -1 39479 40177
AER50210.1 JN699018_p79 hypothetical protein phrog_6691 unknown function unknown function -1 60627 60908
AER50209.1 JN699018_p78 hypothetical protein phrog_4974 unknown function unknown function -1 60384 60572
AER50219.1 JN699018_p88 hypothetical protein phrog_7490 unknown function unknown function -1 62767 62955
AER50174.1 JN699018_p43 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38764 39000
AER50233.1 JN699018_p102 hypothetical protein phrog_6432 unknown function unknown function 1 68062 68217
AER50135.1 JN699018_p4 QueC phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1072 2154
AER50234.1 JN699018_p103 hypothetical protein phrog_5930 unknown function unknown function 1 68282 68584
AER50202.1 JN699018_p71 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57878 58477
AER50142.1 JN699018_p11 hypothetical protein phrog_776 portal protein head and packaging 1 6309 8213
AER50160.1 JN699018_p29 hypothetical protein phrog_838 unknown function unknown function 1 26115 27545
AER50208.1 JN699018_p77 hypothetical protein phrog_928 unknown function unknown function 1 59844 60371
AER50230.1 JN699018_p99 hypothetical protein phrog_4825 unknown function unknown function 1 67408 67581
AER50147.1 JN699018_p16 hypothetical protein phrog_970 unknown function unknown function 1 13935 14540
AER50167.1 JN699018_p36 hypothetical protein phrog_282 unknown function unknown function 1 34249 34902
AER50148.1 JN699018_p17 hypothetical protein phrog_565 holin lysis 1 14537 14971
AER50158.1 JN699018_p27 tail assembly chaperone phrog_1118 tail assembly chaperone tail 1 19745 20338
AER50203.1 JN699018_p72 hypothetical protein phrog_1031 unknown function unknown function 1 58500 58886
AER50218.1 JN699018_p87 hypothetical protein phrog_7414 unknown function unknown function -1 62483 62770
AER50194.1 JN699018_p63 hypothetical protein phrog_6735 unknown function unknown function -1 54969 55088
AER50201.1 JN699018_p70 hypothetical protein phrog_4938 unknown function unknown function 1 57717 57881
AER50171.1 JN699018_p40 hypothetical protein phrog_941 unknown function unknown function 1 37232 37555
AER50220.1 JN699018_p89 hypothetical protein phrog_2089 unknown function unknown function -1 63049 63243
AER50178.1 JN699018_p47 lysin B phrog_102 endolysin lysis 1 41505 42569
AER50182.1 JN699018_p51 hypothetical protein phrog_780 unknown function unknown function -1 45114 45383
AER50179.1 JN699018_p48 hypothetical protein phrog_870 unknown function unknown function -1 42639 43184
AER50141.1 JN699018_p10 hypothetical protein phrog_781 unknown function unknown function 1 5944 6279
AER50145.1 JN699018_p14 capsid protein phrog_777 major head protein head and packaging 1 10985 13012
AER50144.1 JN699018_p13 hypothetical protein phrog_2069 unknown function unknown function 1 10635 10841
AER50192.1 JN699018_p61 hypothetical protein phrog_3025 unknown function unknown function -1 54050 54496
AER50186.1 JN699018_p55 hypothetical protein phrog_1371 unknown function unknown function -1 47912 48385
AER50193.1 JN699018_p62 hypothetical protein phrog_993 unknown function unknown function -1 54493 54969
AER50181.1 JN699018_p50 hypothetical protein phrog_7519 unknown function unknown function -1 44846 45025
AER50215.1 JN699018_p84 hypothetical protein phrog_6338 unknown function unknown function -1 61650 61808
AER50188.1 JN699018_p57 hypothetical protein phrog_6342 unknown function unknown function -1 51069 51830
AER50223.1 JN699018_p92 hypothetical protein phrog_6428 unknown function unknown function -1 63913 64125
AER50138.1 JN699018_p7 hypothetical protein phrog_6317 unknown function unknown function -1 4615 4866
AER50196.1 JN699018_p65 hypothetical protein phrog_6105 unknown function unknown function -1 55352 55702
AER50159.1 JN699018_p28 tapemeasure protein phrog_934 tail length tape measure protein tail 1 20364 26105
AER50187.1 JN699018_p56 RepA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 48428 51034
AER50180.1 JN699018_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43233 44846
AER50132.1 JN699018_p1 ParB phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 73 693
AER50183.1 JN699018_p52 type III restriction helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45429 47228
AER50146.1 JN699018_p15 hypothetical protein phrog_779 unknown function unknown function 1 13111 13920
AER50149.1 JN699018_p18 hypothetical protein phrog_2272 unknown function unknown function 1 14974 15435
AER50137.1 JN699018_p6 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2699 4474
AER50175.1 JN699018_p44 hypothetical protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 38997 39482
AER50222.1 JN699018_p91 hypothetical protein phrog_6199 unknown function unknown function -1 63489 63848
AER50153.1 JN699018_p22 hypothetical protein phrog_6514 unknown function unknown function -1 17467 17577
AER50232.1 JN699018_p101 hypothetical protein phrog_6097 unknown function unknown function 1 67835 68071
AER50231.1 JN699018_p100 hypothetical protein phrog_5733 unknown function unknown function 1 67593 67838
AER50195.1 JN699018_p64 hypothetical protein phrog_6656 unknown function unknown function -1 55125 55355
AER50207.1 JN699018_p76 hypothetical protein phrog_6229 unknown function unknown function 1 59515 59862
AER50197.1 JN699018_p66 hypothetical protein phrog_982 unknown function unknown function -1 55779 56048
AER50185.1 JN699018_p54 hypothetical protein phrog_3892 unknown function unknown function -1 47586 47915
AER50205.1 JN699018_p74 hypothetical protein phrog_1306 unknown function unknown function -1 59163 59297
AER50211.1 JN699018_p80 HNH domain protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60905 61234
AER50198.1 JN699018_p67 hypothetical protein phrog_996 unknown function unknown function 1 56442 57209
AER50166.1 JN699018_p35 hypothetical protein phrog_948 unknown function unknown function 1 33813 34238
AER50206.1 JN699018_p75 hypothetical protein phrog_6511 unknown function unknown function 1 59352 59504
AER50163.1 JN699018_p32 hypothetical protein phrog_356 minor tail protein tail 1 30809 32191
AER50140.1 JN699018_p9 hypothetical protein phrog_6276 unknown function unknown function -1 5543 5839
AER50216.1 JN699018_p85 hypothetical protein phrog_4392 unknown function unknown function -1 61801 62154
AER50164.1 JN699018_p33 hypothetical protein phrog_416 minor tail protein tail 1 32188 33390
AER50170.1 JN699018_p39 hypothetical protein phrog_915 unknown function unknown function 1 36867 37235
AER50190.1 JN699018_p59 hypothetical protein phrog_6482 unknown function unknown function -1 53644 53919
AER50214.1 JN699018_p83 hypothetical protein phrog_6460 unknown function unknown function -1 61483 61653
AER50151.1 JN699018_p20 hypothetical protein phrog_2525 unknown function unknown function 1 15908 16240
AER50143.1 JN699018_p12 portal protein phrog_859 portal protein head and packaging 1 8203 10635
AER50150.1 JN699018_p19 hypothetical protein phrog_2344 unknown function unknown function 1 15432 15911
AER50173.1 JN699018_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 37983 38708
AER50136.1 JN699018_p5 ParB phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2151 2720
AER50184.1 JN699018_p53 hypothetical protein phrog_6400 unknown function unknown function -1 47225 47575
AER50204.1 JN699018_p73 hypothetical protein phrog_4885 unknown function unknown function 1 58893 59150
AER50139.1 JN699018_p8 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4863 5408
AER50134.1 JN699018_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1075
AER50189.1 JN699018_p58 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51827 53644
AER50154.1 JN699018_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 17708 18448
AER50212.1 JN699018_p81 hypothetical protein phrog_4461 unknown function unknown function -1 61227 61334
AER50156.1 JN699018_p25 hypothetical protein phrog_901 unknown function unknown function 1 18977 19348
AER50199.1 JN699018_p68 hypothetical protein phrog_1016 unknown function unknown function 1 57245 57493
AER50161.1 JN699018_p30 hypothetical protein phrog_837 minor tail protein tail 1 27542 28585
AER50228.1 JN699018_p97 hypothetical protein phrog_1221 unknown function unknown function -1 65808 66920
AER50157.1 JN699018_p26 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 19332 19745
AER50162.1 JN699018_p31 hypothetical protein phrog_746 minor tail protein tail 1 28582 30807
AER50172.1 JN699018_p41 hypothetical protein phrog_892 tail fiber protein tail 1 37573 37983
AER50224.1 JN699018_p93 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64125 64508
AER50177.1 JN699018_p46 lysin A phrog_700 endolysin lysis 1 40176 41504
AER50152.1 JN699018_p21 major tail subunit phrog_792 major tail protein tail 1 16328 17407
AER50191.1 JN699018_p60 hypothetical protein phrog_6936 unknown function unknown function -1 53916 54053
AER50213.1 JN699018_p82 hypothetical protein phrog_6304 unknown function unknown function -1 61322 61486