| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN699018 |
Definition |
Mycobacterium phage Kamiyu, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus. |
DB of origin |
PVOG |
Length |
68633 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
67.47 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AER50200.1 | JN699018_p69 | hypothetical protein | phrog_6404 | unknown function | unknown function | 1 | 57490 | 57720 |
| AER50168.1 | JN699018_p37 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34899 | 35498 |
| AER50165.1 | JN699018_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33421 | 33804 |
| AER50229.1 | JN699018_p98 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 66994 | 67230 |
| AER50226.1 | JN699018_p95 | hypothetical protein | phrog_6469 | unknown function | unknown function | -1 | 64681 | 65148 |
| AER50217.1 | JN699018_p86 | hypothetical protein | phrog_7541 | unknown function | unknown function | -1 | 62154 | 62486 |
| AER50221.1 | JN699018_p90 | hypothetical protein | phrog_5355 | unknown function | unknown function | -1 | 63258 | 63413 |
| AER50155.1 | JN699018_p24 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 18445 | 18966 |
| AER50169.1 | JN699018_p38 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 35495 | 36844 |
| AER50133.1 | JN699018_p2 | hypothetical protein | phrog_6919 | unknown function | unknown function | 1 | 690 | 854 |
| AER50225.1 | JN699018_p94 | hypothetical protein | phrog_6114 | unknown function | unknown function | -1 | 64505 | 64684 |
| AER50227.1 | JN699018_p96 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 65246 | 65734 |
| AER50176.1 | JN699018_p45 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39479 | 40177 |
| AER50210.1 | JN699018_p79 | hypothetical protein | phrog_6691 | unknown function | unknown function | -1 | 60627 | 60908 |
| AER50209.1 | JN699018_p78 | hypothetical protein | phrog_4974 | unknown function | unknown function | -1 | 60384 | 60572 |
| AER50219.1 | JN699018_p88 | hypothetical protein | phrog_7490 | unknown function | unknown function | -1 | 62767 | 62955 |
| AER50174.1 | JN699018_p43 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38764 | 39000 |
| AER50233.1 | JN699018_p102 | hypothetical protein | phrog_6432 | unknown function | unknown function | 1 | 68062 | 68217 |
| AER50135.1 | JN699018_p4 | QueC | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 1072 | 2154 |
| AER50234.1 | JN699018_p103 | hypothetical protein | phrog_5930 | unknown function | unknown function | 1 | 68282 | 68584 |
| AER50202.1 | JN699018_p71 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 57878 | 58477 |
| AER50142.1 | JN699018_p11 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 6309 | 8213 |
| AER50160.1 | JN699018_p29 | hypothetical protein | phrog_838 | unknown function | unknown function | 1 | 26115 | 27545 |
| AER50208.1 | JN699018_p77 | hypothetical protein | phrog_928 | unknown function | unknown function | 1 | 59844 | 60371 |
| AER50230.1 | JN699018_p99 | hypothetical protein | phrog_4825 | unknown function | unknown function | 1 | 67408 | 67581 |
| AER50147.1 | JN699018_p16 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 13935 | 14540 |
| AER50167.1 | JN699018_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34249 | 34902 |
| AER50148.1 | JN699018_p17 | hypothetical protein | phrog_565 | holin | lysis | 1 | 14537 | 14971 |
| AER50158.1 | JN699018_p27 | tail assembly chaperone | phrog_1118 | tail assembly chaperone | tail | 1 | 19745 | 20338 |
| AER50203.1 | JN699018_p72 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 58500 | 58886 |
| AER50218.1 | JN699018_p87 | hypothetical protein | phrog_7414 | unknown function | unknown function | -1 | 62483 | 62770 |
| AER50194.1 | JN699018_p63 | hypothetical protein | phrog_6735 | unknown function | unknown function | -1 | 54969 | 55088 |
| AER50201.1 | JN699018_p70 | hypothetical protein | phrog_4938 | unknown function | unknown function | 1 | 57717 | 57881 |
| AER50171.1 | JN699018_p40 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37232 | 37555 |
| AER50220.1 | JN699018_p89 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 63049 | 63243 |
| AER50178.1 | JN699018_p47 | lysin B | phrog_102 | endolysin | lysis | 1 | 41505 | 42569 |
| AER50182.1 | JN699018_p51 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 45114 | 45383 |
| AER50179.1 | JN699018_p48 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42639 | 43184 |
| AER50141.1 | JN699018_p10 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 5944 | 6279 |
| AER50145.1 | JN699018_p14 | capsid protein | phrog_777 | major head protein | head and packaging | 1 | 10985 | 13012 |
| AER50144.1 | JN699018_p13 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 10635 | 10841 |
| AER50192.1 | JN699018_p61 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 54050 | 54496 |
| AER50186.1 | JN699018_p55 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47912 | 48385 |
| AER50193.1 | JN699018_p62 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 54493 | 54969 |
| AER50181.1 | JN699018_p50 | hypothetical protein | phrog_7519 | unknown function | unknown function | -1 | 44846 | 45025 |
| AER50215.1 | JN699018_p84 | hypothetical protein | phrog_6338 | unknown function | unknown function | -1 | 61650 | 61808 |
| AER50188.1 | JN699018_p57 | hypothetical protein | phrog_6342 | unknown function | unknown function | -1 | 51069 | 51830 |
| AER50223.1 | JN699018_p92 | hypothetical protein | phrog_6428 | unknown function | unknown function | -1 | 63913 | 64125 |
| AER50138.1 | JN699018_p7 | hypothetical protein | phrog_6317 | unknown function | unknown function | -1 | 4615 | 4866 |
| AER50196.1 | JN699018_p65 | hypothetical protein | phrog_6105 | unknown function | unknown function | -1 | 55352 | 55702 |
| AER50159.1 | JN699018_p28 | tapemeasure protein | phrog_934 | tail length tape measure protein | tail | 1 | 20364 | 26105 |
| AER50187.1 | JN699018_p56 | RepA | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 48428 | 51034 |
| AER50180.1 | JN699018_p49 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43233 | 44846 |
| AER50132.1 | JN699018_p1 | ParB | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 73 | 693 |
| AER50183.1 | JN699018_p52 | type III restriction helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 45429 | 47228 |
| AER50146.1 | JN699018_p15 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 13111 | 13920 |
| AER50149.1 | JN699018_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 14974 | 15435 |
| AER50137.1 | JN699018_p6 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 2699 | 4474 |
| AER50175.1 | JN699018_p44 | hypothetical protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38997 | 39482 |
| AER50222.1 | JN699018_p91 | hypothetical protein | phrog_6199 | unknown function | unknown function | -1 | 63489 | 63848 |
| AER50153.1 | JN699018_p22 | hypothetical protein | phrog_6514 | unknown function | unknown function | -1 | 17467 | 17577 |
| AER50232.1 | JN699018_p101 | hypothetical protein | phrog_6097 | unknown function | unknown function | 1 | 67835 | 68071 |
| AER50231.1 | JN699018_p100 | hypothetical protein | phrog_5733 | unknown function | unknown function | 1 | 67593 | 67838 |
| AER50195.1 | JN699018_p64 | hypothetical protein | phrog_6656 | unknown function | unknown function | -1 | 55125 | 55355 |
| AER50207.1 | JN699018_p76 | hypothetical protein | phrog_6229 | unknown function | unknown function | 1 | 59515 | 59862 |
| AER50197.1 | JN699018_p66 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 55779 | 56048 |
| AER50185.1 | JN699018_p54 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 47586 | 47915 |
| AER50205.1 | JN699018_p74 | hypothetical protein | phrog_1306 | unknown function | unknown function | -1 | 59163 | 59297 |
| AER50211.1 | JN699018_p80 | HNH domain protein | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60905 | 61234 |
| AER50198.1 | JN699018_p67 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 56442 | 57209 |
| AER50166.1 | JN699018_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 33813 | 34238 |
| AER50206.1 | JN699018_p75 | hypothetical protein | phrog_6511 | unknown function | unknown function | 1 | 59352 | 59504 |
| AER50163.1 | JN699018_p32 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 30809 | 32191 |
| AER50140.1 | JN699018_p9 | hypothetical protein | phrog_6276 | unknown function | unknown function | -1 | 5543 | 5839 |
| AER50216.1 | JN699018_p85 | hypothetical protein | phrog_4392 | unknown function | unknown function | -1 | 61801 | 62154 |
| AER50164.1 | JN699018_p33 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 32188 | 33390 |
| AER50170.1 | JN699018_p39 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 36867 | 37235 |
| AER50190.1 | JN699018_p59 | hypothetical protein | phrog_6482 | unknown function | unknown function | -1 | 53644 | 53919 |
| AER50214.1 | JN699018_p83 | hypothetical protein | phrog_6460 | unknown function | unknown function | -1 | 61483 | 61653 |
| AER50151.1 | JN699018_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 15908 | 16240 |
| AER50143.1 | JN699018_p12 | portal protein | phrog_859 | portal protein | head and packaging | 1 | 8203 | 10635 |
| AER50150.1 | JN699018_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 15432 | 15911 |
| AER50173.1 | JN699018_p42 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 37983 | 38708 |
| AER50136.1 | JN699018_p5 | ParB | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 2151 | 2720 |
| AER50184.1 | JN699018_p53 | hypothetical protein | phrog_6400 | unknown function | unknown function | -1 | 47225 | 47575 |
| AER50204.1 | JN699018_p73 | hypothetical protein | phrog_4885 | unknown function | unknown function | 1 | 58893 | 59150 |
| AER50139.1 | JN699018_p8 | RuvC | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 4863 | 5408 |
| AER50134.1 | JN699018_p3 | hypothetical protein | phrog_6307 | unknown function | unknown function | 1 | 851 | 1075 |
| AER50189.1 | JN699018_p58 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 51827 | 53644 |
| AER50154.1 | JN699018_p23 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 17708 | 18448 |
| AER50212.1 | JN699018_p81 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 61227 | 61334 |
| AER50156.1 | JN699018_p25 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 18977 | 19348 |
| AER50199.1 | JN699018_p68 | hypothetical protein | phrog_1016 | unknown function | unknown function | 1 | 57245 | 57493 |
| AER50161.1 | JN699018_p30 | hypothetical protein | phrog_837 | minor tail protein | tail | 1 | 27542 | 28585 |
| AER50228.1 | JN699018_p97 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 65808 | 66920 |
| AER50157.1 | JN699018_p26 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19332 | 19745 |
| AER50162.1 | JN699018_p31 | hypothetical protein | phrog_746 | minor tail protein | tail | 1 | 28582 | 30807 |
| AER50172.1 | JN699018_p41 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 37573 | 37983 |
| AER50224.1 | JN699018_p93 | hypothetical protein | phrog_5411 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64125 | 64508 |
| AER50177.1 | JN699018_p46 | lysin A | phrog_700 | endolysin | lysis | 1 | 40176 | 41504 |
| AER50152.1 | JN699018_p21 | major tail subunit | phrog_792 | major tail protein | tail | 1 | 16328 | 17407 |
| AER50191.1 | JN699018_p60 | hypothetical protein | phrog_6936 | unknown function | unknown function | -1 | 53916 | 54053 |
| AER50213.1 | JN699018_p82 | hypothetical protein | phrog_6304 | unknown function | unknown function | -1 | 61322 | 61486 |