| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN699628 |
Definition |
Mycobacterium phage Bongo, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Bongovirus; Mycobacterium virus Bongo. |
DB of origin |
PVOG |
Length |
80228 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
132 |
%GC |
61.62 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AER26080.1 | JN699628_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 21457 | 22368 |
| AER26113.1 | JN699628_p70 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 46141 | 46485 |
| AER26129.1 | JN699628_p86 | hypothetical protein | phrog_3491 | unknown function | unknown function | 1 | 53176 | 53421 |
| AER26112.1 | JN699628_p69 | DnaB-like helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 44858 | 46144 |
| AER26179.1 | JN699628_p46 | hypothetical protein | phrog_4870 | unknown function | unknown function | -1 | 34808 | 35134 |
| AER26075.1 | JN699628_p22 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 12285 | 12797 |
| AER26134.1 | JN699628_p91 | hypothetical protein | phrog_26843 | unknown function | unknown function | 1 | 57806 | 57967 |
| AER26193.1 | JN699628_p4 | hypothetical protein | phrog_16500 | unknown function | unknown function | -1 | 1951 | 2136 |
| AER26152.1 | JN699628_p132 | hypothetical protein | phrog_2554 | unknown function | unknown function | -1 | 77606 | 78334 |
| AER26086.1 | JN699628_p33 | hypothetical protein | phrog_9635 | unknown function | unknown function | 1 | 28449 | 28769 |
| AER26093.1 | JN699628_p50 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 37258 | 37608 |
| AER26154.1 | JN699628_p130 | hypothetical protein | phrog_23779 | unknown function | unknown function | -1 | 76998 | 77219 |
| AER26146.1 | JN699628_p103 | hypothetical protein | phrog_15548 | unknown function | unknown function | 1 | 65526 | 65708 |
| AER26123.1 | JN699628_p80 | hypothetical protein | phrog_14780 | unknown function | unknown function | 1 | 51056 | 51316 |
| AER26143.1 | JN699628_p100 | hypothetical protein | phrog_1843 | unknown function | unknown function | 1 | 63868 | 64563 |
| AER26124.1 | JN699628_p81 | hypothetical protein | phrog_13413 | unknown function | unknown function | 1 | 51313 | 51528 |
| AER26121.1 | JN699628_p78 | hypothetical protein | phrog_11257 | unknown function | unknown function | 1 | 49591 | 50193 |
| AER26144.1 | JN699628_p101 | hypothetical protein | phrog_15844 | unknown function | unknown function | 1 | 64560 | 64808 |
| AER26098.1 | JN699628_p55 | hypothetical protein | phrog_27643 | unknown function | unknown function | 1 | 39211 | 39369 |
| AER26139.1 | JN699628_p96 | MazG | phrog_229 | MazG-like pyrophosphatase | other | 1 | 62677 | 63024 |
| AER26190.1 | JN699628_p7 | hypothetical protein | phrog_14568 | unknown function | unknown function | -1 | 2572 | 2838 |
| AER26151.1 | JN699628_p108 | hypothetical protein | phrog_18619 | unknown function | unknown function | 1 | 67167 | 67700 |
| AER26109.1 | JN699628_p66 | hypothetical protein | phrog_18152 | unknown function | unknown function | 1 | 43452 | 43856 |
| AER26099.1 | JN699628_p56 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 39492 | 40352 |
| AER26069.1 | JN699628_p16 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 7882 | 9042 |
| AER26172.1 | JN699628_p112 | hypothetical protein | phrog_14728 | unknown function | unknown function | -1 | 70198 | 70428 |
| AER26091.1 | JN699628_p38 | lysin B | phrog_102 | endolysin | lysis | 1 | 31794 | 32765 |
| AER26150.1 | JN699628_p107 | hypothetical protein | phrog_5209 | unknown function | unknown function | 1 | 66842 | 67180 |
| AER26126.1 | JN699628_p83 | PTPc tyrosine phosphatase | phrog_10650 | dual specificity phosphatase | other | 1 | 52135 | 52641 |
| AER26071.1 | JN699628_p18 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 9854 | 11017 |
| AER26128.1 | JN699628_p85 | hypothetical protein | phrog_10666 | unknown function | unknown function | 1 | 52871 | 53179 |
| AER26189.1 | JN699628_p8 | hypothetical protein | phrog_14674 | unknown function | unknown function | -1 | 2826 | 3134 |
| AER26070.1 | JN699628_p17 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 9093 | 9809 |
| AER26079.1 | JN699628_p26 | tape measure | phrog_3547 | tail length tape measure protein | tail | 1 | 14636 | 21457 |
| AER26117.1 | JN699628_p74 | hypothetical protein | phrog_4786 | cysteine dioxygenase | other | 1 | 48202 | 48675 |
| AER26115.1 | JN699628_p72 | WhiB family transcription factor | phrog_10071 | transcriptional regulator WhiB-like | transcription regulation | 1 | 47062 | 47703 |
| AER26072.1 | JN699628_p19 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11031 | 11513 |
| AER26166.1 | JN699628_p118 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 72399 | 72617 |
| AER26159.1 | JN699628_p125 | hypothetical protein | phrog_19715 | unknown function | unknown function | -1 | 75470 | 75598 |
| AER26142.1 | JN699628_p99 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 63430 | 63834 |
| AER26120.1 | JN699628_p77 | endonuclease VII | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 49178 | 49594 |
| AER26181.1 | JN699628_p44 | hypothetical protein | phrog_16604 | unknown function | unknown function | -1 | 34223 | 34537 |
| AER26180.1 | JN699628_p45 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 34515 | 34811 |
| AER26147.1 | JN699628_p104 | phosphoesterase | phrog_547 | phosphoesterase | other | 1 | 65705 | 66364 |
| AER26177.1 | JN699628_p48 | hypothetical protein | phrog_25083 | unknown function | unknown function | -1 | 36007 | 36174 |
| AER26165.1 | JN699628_p119 | hypothetical protein | phrog_27432 | unknown function | unknown function | -1 | 72643 | 72756 |
| AER26155.1 | JN699628_p129 | hypothetical protein | phrog_24102 | unknown function | unknown function | -1 | 76664 | 76915 |
| AER26106.1 | JN699628_p63 | hypothetical protein | phrog_18647 | unknown function | unknown function | 1 | 42747 | 42968 |
| AER26136.1 | JN699628_p93 | NrdG | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 58625 | 59578 |
| AER26131.1 | JN699628_p88 | hypothetical protein | phrog_16036 | unknown function | unknown function | 1 | 53713 | 53904 |
| AER26157.1 | JN699628_p127 | hypothetical protein | phrog_27306 | unknown function | unknown function | -1 | 76024 | 76227 |
| AER26110.1 | JN699628_p67 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 43867 | 44313 |
| AER26092.1 | JN699628_p39 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32762 | 33040 |
| AER26085.1 | JN699628_p32 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 28085 | 28447 |
| AER26137.1 | JN699628_p94 | RtcB | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 60447 | 61679 |
| AER26175.1 | JN699628_p109 | integrase | phrog_95 | integrase | integration and excision | -1 | 67796 | 69256 |
| AER26176.1 | JN699628_p49 | hypothetical protein | phrog_15331 | unknown function | unknown function | -1 | 36171 | 36695 |
| AER26138.1 | JN699628_p95 | band-7 protein | phrog_200 | lipoprotein | other | 1 | 61713 | 62612 |
| AER26145.1 | JN699628_p102 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 65032 | 65529 |
| AER26156.1 | JN699628_p128 | hypothetical protein | phrog_27653 | unknown function | unknown function | -1 | 76325 | 76636 |
| AER26132.1 | JN699628_p89 | HNH endonuclease domain protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 53932 | 54258 |
| AER26118.1 | JN699628_p75 | hypothetical protein | phrog_21107 | unknown function | unknown function | 1 | 48660 | 48935 |
| AER26114.1 | JN699628_p71 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 46680 | 47099 |
| AER26068.1 | JN699628_p15 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 6260 | 7882 |
| AER26104.1 | JN699628_p61 | hypothetical protein | phrog_13460 | unknown function | unknown function | 1 | 41961 | 42296 |
| AER26168.1 | JN699628_p116 | hypothetical protein | phrog_16631 | unknown function | unknown function | -1 | 71496 | 71735 |
| AER26108.1 | JN699628_p65 | hypothetical protein | phrog_24993 | unknown function | unknown function | 1 | 43225 | 43455 |
| AER26149.1 | JN699628_p106 | hypothetical protein | phrog_17078 | unknown function | unknown function | 1 | 66591 | 66845 |
| AER26125.1 | JN699628_p82 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51596 | 52138 |
| AER26074.1 | JN699628_p21 | hypothetical protein | phrog_5210 | neck protein | connector | 1 | 11871 | 12275 |
| AER26192.1 | JN699628_p5 | hypothetical protein | phrog_3641 | unknown function | unknown function | -1 | 2133 | 2366 |
| AER26174.1 | JN699628_p110 | hypothetical protein | phrog_16009 | unknown function | unknown function | -1 | 69391 | 69642 |
| AER26185.1 | JN699628_p40 | hypothetical protein | phrog_15787 | unknown function | unknown function | -1 | 33106 | 33441 |
| AER26196.1 | JN699628_p1 | hypothetical protein | phrog_14498 | unknown function | unknown function | -1 | 238 | 531 |
| AER26164.1 | JN699628_p120 | hypothetical protein | phrog_26607 | unknown function | unknown function | -1 | 72909 | 73259 |
| AER26148.1 | JN699628_p105 | hypothetical protein | phrog_6582 | unknown function | unknown function | 1 | 66361 | 66594 |
| AER26161.1 | JN699628_p123 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 74703 | 75110 |
| AER26078.1 | JN699628_p24 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 13804 | 14633 |
| AER26116.1 | JN699628_p73 | hypothetical protein | phrog_16331 | unknown function | unknown function | 1 | 47961 | 48209 |
| AER26101.1 | JN699628_p58 | ClpP-like protease | phrog_94 | head maturation protease | head and packaging | 1 | 40666 | 41253 |
| AER26111.1 | JN699628_p68 | hypothetical protein | phrog_10293 | unknown function | unknown function | 1 | 44394 | 44951 |
| AER26127.1 | JN699628_p84 | hypothetical protein | phrog_15456 | unknown function | unknown function | 1 | 52638 | 52874 |
| AER26130.1 | JN699628_p87 | hypothetical protein | phrog_25726 | unknown function | unknown function | 1 | 53418 | 53555 |
| AER26082.1 | JN699628_p29 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 24158 | 24616 |
| AER26171.1 | JN699628_p113 | hypothetical protein | phrog_22107 | unknown function | unknown function | -1 | 70425 | 70532 |
| AER26073.1 | JN699628_p20 | hypothetical protein | phrog_10309 | head-tail connector protein | connector | 1 | 11510 | 11878 |
| AER26188.1 | JN699628_p9 | hypothetical protein | phrog_6582 | unknown function | unknown function | -1 | 3131 | 3418 |
| AER26122.1 | JN699628_p79 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 50247 | 51047 |
| AER26090.1 | JN699628_p37 | holin | phrog_16417 | holin | lysis | 1 | 31396 | 31722 |
| AER26119.1 | JN699628_p76 | hypothetical protein | phrog_16095 | unknown function | unknown function | 1 | 48932 | 49177 |
| AER26088.1 | JN699628_p35 | lysin A | phrog_700 | endolysin | lysis | 1 | 29799 | 31166 |
| AER26066.1 | JN699628_p13 | hypothetical protein | phrog_1496 | terminase small subunit | head and packaging | 1 | 4298 | 4693 |
| AER26097.1 | JN699628_p54 | ERF protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 38468 | 39214 |
| AER26160.1 | JN699628_p124 | hypothetical protein | phrog_11479 | unknown function | unknown function | -1 | 75192 | 75470 |
| AER26141.1 | JN699628_p98 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 63284 | 63433 |
| AER26194.1 | JN699628_p3 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 1496 | 1873 |
| AER26183.1 | JN699628_p42 | hypothetical protein | phrog_6624 | unknown function | unknown function | -1 | 33808 | 33999 |
| AER26102.1 | JN699628_p59 | hypothetical protein | phrog_10000 | unknown function | unknown function | 1 | 41250 | 41636 |
| AER26135.1 | JN699628_p92 | hypothetical protein | phrog_15799 | unknown function | unknown function | 1 | 58244 | 58501 |
| AER26158.1 | JN699628_p126 | hypothetical protein | phrog_23751 | unknown function | unknown function | -1 | 75697 | 75924 |
| AER26167.1 | JN699628_p117 | hypothetical protein | phrog_16077 | unknown function | unknown function | -1 | 72025 | 72315 |
| AER26195.1 | JN699628_p2 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 760 | 1191 |
| AER26153.1 | JN699628_p131 | hypothetical protein | phrog_25605 | unknown function | unknown function | -1 | 77298 | 77519 |
| AER26105.1 | JN699628_p62 | hypothetical protein | phrog_13394 | unknown function | unknown function | 1 | 42277 | 42750 |
| AER26107.1 | JN699628_p64 | hypothetical protein | phrog_28738 | unknown function | unknown function | 1 | 42965 | 43228 |
| AER26169.1 | JN699628_p115 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 71296 | 71499 |
| AER26096.1 | JN699628_p53 | hypothetical protein | phrog_1374 | unknown function | unknown function | 1 | 38212 | 38385 |
| AER26095.1 | JN699628_p52 | hypothetical protein | phrog_11487 | unknown function | unknown function | 1 | 37871 | 38215 |
| AER26162.1 | JN699628_p122 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 73514 | 74587 |
| AER26089.1 | JN699628_p36 | hypothetical protein | phrog_16125 | unknown function | unknown function | 1 | 31163 | 31399 |
| AER26184.1 | JN699628_p41 | hypothetical protein | phrog_3236 | unknown function | unknown function | -1 | 33453 | 33797 |
| AER26170.1 | JN699628_p114 | hypothetical protein | phrog_14784 | unknown function | unknown function | -1 | 70662 | 71123 |
| AER26173.1 | JN699628_p111 | hypothetical protein | phrog_733 | excisionase | integration and excision | -1 | 69642 | 70166 |
| AER26182.1 | JN699628_p43 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 33996 | 34226 |
| AER26191.1 | JN699628_p6 | hypothetical protein | phrog_24639 | unknown function | unknown function | -1 | 2363 | 2575 |
| AER26077.1 | JN699628_p25 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 13804 | 14139 |
| AER26081.1 | JN699628_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 22368 | 24104 |
| AER26186.1 | JN699628_p11 | hypothetical protein | phrog_15938 | unknown function | unknown function | -1 | 3645 | 3944 |
| AER26178.1 | JN699628_p47 | NrdC | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 35131 | 35928 |
| AER26067.1 | JN699628_p14 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 4719 | 6263 |
| AER26103.1 | JN699628_p60 | hypothetical protein | phrog_10063 | unknown function | unknown function | 1 | 41636 | 41977 |
| AER26094.1 | JN699628_p51 | hypothetical protein | phrog_15756 | unknown function | unknown function | 1 | 37589 | 37852 |
| AER26084.1 | JN699628_p31 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 26992 | 28047 |
| AER26100.1 | JN699628_p57 | hypothetical protein | phrog_14665 | unknown function | unknown function | 1 | 40349 | 40669 |
| AER26140.1 | JN699628_p97 | hypothetical protein | phrog_20008 | unknown function | unknown function | 1 | 63021 | 63287 |
| AER26163.1 | JN699628_p121 | hypothetical protein | phrog_865 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 73256 | 73417 |
| AER26133.1 | JN699628_p90 | hypothetical protein | phrog_15606 | unknown function | unknown function | 1 | 54347 | 54556 |
| AER26187.1 | JN699628_p10 | hypothetical protein | phrog_6582 | unknown function | unknown function | -1 | 3415 | 3645 |
| AER26076.1 | JN699628_p23 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 12816 | 13715 |
| AER26065.1 | JN699628_p12 | hypothetical protein | phrog_14015 | unknown function | unknown function | 1 | 4042 | 4365 |
| AER26087.1 | JN699628_p34 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 28792 | 29790 |
| AER26083.1 | JN699628_p30 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 24622 | 26973 |