Genomic map of Pseudomonas virus FHA0480 (JN808773)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN808773
Definition
Pseudomonas phage F_HA0480sp/Pa1651, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
DB of origin
PVOG
Length
37374
Host Name
Pseudomonas
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
64.14
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEY99424.1 JN808773_p26 hypothetical protein phrog_8661 unknown function unknown function 1 12342 12461
AEY99420.1 JN808773_p47 hypothetical protein phrog_687 structural protein head and packaging 1 29398 30321
AEY99410.1 JN808773_p24 hypothetical protein phrog_4057 unknown function unknown function 1 11715 11957
AEY99396.1 JN808773_p46 hypothetical protein phrog_687 structural protein head and packaging 1 28440 29396
AEY99415.1 JN808773_p55 hypothetical protein phrog_2623 unknown function unknown function 1 37001 37225
AEY99426.1 JN808773_p5 DNA-binding domain protein phrog_310 transposase integration and excision 1 2054 4123
AEY99421.1 JN808773_p38 major head protein,subunit phrog_371 major head protein head and packaging 1 20663 21577
AEY99401.1 JN808773_p48 hypothetical protein phrog_1082 tail assembly protein tail 1 30321 32024
AEY99393.1 JN808773_p30 hypothetical protein phrog_113 portal protein head and packaging 1 14945 16525
AEY99412.1 JN808773_p19 hypothetical protein phrog_4093 unknown function unknown function 1 9298 9594
AEY99380.1 JN808773_p33 hypothetical protein phrog_20563 unknown function unknown function 1 18391 18645
AEY99381.1 JN808773_p31 protein F-like protein phrog_220 minor head protein and DNA pilot head and packaging 1 16525 17811
AEY99372.1 JN808773_p42 hypothetical protein phrog_3129 unknown function unknown function 1 23122 23307
AEY99374.1 JN808773_p49 hypothetical protein phrog_778 tail assembly protein tail 1 32014 32835
AEY99386.1 JN808773_p40 hypothetical protein phrog_195 head-tail adaptor connector 1 22248 22664
AEY99411.1 JN808773_p10 hypothetical protein phrog_2119 unknown function unknown function 1 6360 6773
AEY99391.1 JN808773_p43 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 23333 24106
AEY99397.1 JN808773_p11 hypothetical protein phrog_2043 unknown function unknown function 1 6736 7047
AEY99404.1 JN808773_p17 hypothetical protein phrog_3223 unknown function unknown function 1 8749 8955
AEY99389.1 JN808773_p32 phage virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 17811 18278
AEY99403.1 JN808773_p39 hypothetical protein singleton unknown function unknown function -1 21628 22233
AEY99385.1 JN808773_p28 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12663 13163
AEY99425.1 JN808773_p29 hypothetical protein phrog_38 terminase large subunit head and packaging 1 13160 14935
AEY99398.1 JN808773_p16 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8466 8747
AEY99390.1 JN808773_p53 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35492 36643
AEY99423.1 JN808773_p44 hypothetical protein phrog_1442 tail assembly chaperone tail 1 24110 24607
AEY99422.1 JN808773_p6 ATPase, AAA family phrog_296 DNA transposition protein integration and excision 1 4138 4890
AEY99395.1 JN808773_p52 hypothetical protein phrog_1101 tail protein tail 1 33288 35495
AEY99388.1 JN808773_p1 peptidase S24-like protein phrog_4 transcriptional repressor transcription regulation -1 176 889
AEY99399.1 JN808773_p45 tape measure domain protein phrog_2335 tail length tape measure protein tail 1 24734 28432
AEY99375.1 JN808773_p51 hypothetical protein phrog_1196 tail assembly chaperone tail 1 33080 33298
AEY99373.1 JN808773_p15 hypothetical protein phrog_7895 unknown function unknown function 1 8243 8464
AEY99402.1 JN808773_p14 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 7963 8241
AEY99417.1 JN808773_p7 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 4887 5552
AEY99378.1 JN808773_p25 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11954 12355
AEY99383.1 JN808773_p41 hypothetical protein phrog_209 portal protein head and packaging 1 22661 23134
AEY99387.1 JN808773_p36 hypothetical protein phrog_10291 unknown function unknown function -1 19438 19563
AEY99376.1 JN808773_p8 hypothetical protein phrog_3190 unknown function unknown function 1 5624 6259
AEY99414.1 JN808773_p18 hypothetical protein phrog_3652 unknown function unknown function 1 8958 9227
AEY99413.1 JN808773_p20 hypothetical protein phrog_286 unknown function unknown function 1 9591 9992
AEY99406.1 JN808773_p35 hypothetical protein phrog_3865 unknown function unknown function 1 19118 19342
AEY99416.1 JN808773_p54 hypothetical protein phrog_2432 unknown function unknown function 1 36640 36927
AEY99400.1 JN808773_p13 hypothetical protein phrog_6755 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7584 7961
AEY99419.1 JN808773_p21 mor transcription activator family protein phrog_836 late transcriptional activator transcription regulation 1 9985 10434
AEY99407.1 JN808773_p34 hypothetical protein phrog_9439 unknown function unknown function 1 18702 19124
AEY99394.1 JN808773_p23 structural protein P5 phrog_873 endolysin head and packaging 1 11299 11715
AEY99418.1 JN808773_p4 hypothetical protein phrog_4468 unknown function unknown function 1 1852 2061
AEY99408.1 JN808773_p12 Gam-like protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7064 7582
AEY99409.1 JN808773_p22 hypothetical protein phrog_1024 unknown function unknown function 1 10829 11299
AEY99379.1 JN808773_p50 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32844 33083
AEY99382.1 JN808773_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1418 1852
AEY99405.1 JN808773_p27 hypothetical protein phrog_1103 unknown function unknown function 1 12466 12654
AEY99392.1 JN808773_p9 hypothetical protein phrog_3765 unknown function unknown function 1 6244 6360
AEY99384.1 JN808773_p37 hypothetical protein phrog_328 head maturation protease head and packaging 1 19562 20659
AEY99377.1 JN808773_p2 transcriptional regulator Ner phrog_769 transcriptional repressor transcription regulation 1 1059 1415