| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN808773 |
Definition |
Pseudomonas phage F_HA0480sp/Pa1651, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus. |
DB of origin |
PVOG |
Length |
37374 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
64.14 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AEY99424.1 | JN808773_p26 | hypothetical protein | phrog_8661 | unknown function | unknown function | 1 | 12342 | 12461 |
| AEY99420.1 | JN808773_p47 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 29398 | 30321 |
| AEY99410.1 | JN808773_p24 | hypothetical protein | phrog_4057 | unknown function | unknown function | 1 | 11715 | 11957 |
| AEY99396.1 | JN808773_p46 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 28440 | 29396 |
| AEY99415.1 | JN808773_p55 | hypothetical protein | phrog_2623 | unknown function | unknown function | 1 | 37001 | 37225 |
| AEY99426.1 | JN808773_p5 | DNA-binding domain protein | phrog_310 | transposase | integration and excision | 1 | 2054 | 4123 |
| AEY99421.1 | JN808773_p38 | major head protein,subunit | phrog_371 | major head protein | head and packaging | 1 | 20663 | 21577 |
| AEY99401.1 | JN808773_p48 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 30321 | 32024 |
| AEY99393.1 | JN808773_p30 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 14945 | 16525 |
| AEY99412.1 | JN808773_p19 | hypothetical protein | phrog_4093 | unknown function | unknown function | 1 | 9298 | 9594 |
| AEY99380.1 | JN808773_p33 | hypothetical protein | phrog_20563 | unknown function | unknown function | 1 | 18391 | 18645 |
| AEY99381.1 | JN808773_p31 | protein F-like protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 16525 | 17811 |
| AEY99372.1 | JN808773_p42 | hypothetical protein | phrog_3129 | unknown function | unknown function | 1 | 23122 | 23307 |
| AEY99374.1 | JN808773_p49 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 32014 | 32835 |
| AEY99386.1 | JN808773_p40 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 22248 | 22664 |
| AEY99411.1 | JN808773_p10 | hypothetical protein | phrog_2119 | unknown function | unknown function | 1 | 6360 | 6773 |
| AEY99391.1 | JN808773_p43 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 23333 | 24106 |
| AEY99397.1 | JN808773_p11 | hypothetical protein | phrog_2043 | unknown function | unknown function | 1 | 6736 | 7047 |
| AEY99404.1 | JN808773_p17 | hypothetical protein | phrog_3223 | unknown function | unknown function | 1 | 8749 | 8955 |
| AEY99389.1 | JN808773_p32 | phage virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 17811 | 18278 |
| AEY99403.1 | JN808773_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 21628 | 22233 |
| AEY99385.1 | JN808773_p28 | hypothetical protein | phrog_756 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12663 | 13163 |
| AEY99425.1 | JN808773_p29 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 13160 | 14935 |
| AEY99398.1 | JN808773_p16 | hypothetical protein | phrog_1518 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 8466 | 8747 |
| AEY99390.1 | JN808773_p53 | hypothetical protein | phrog_2875 | virion structural protein | head and packaging | 1 | 35492 | 36643 |
| AEY99423.1 | JN808773_p44 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 24110 | 24607 |
| AEY99422.1 | JN808773_p6 | ATPase, AAA family | phrog_296 | DNA transposition protein | integration and excision | 1 | 4138 | 4890 |
| AEY99395.1 | JN808773_p52 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 33288 | 35495 |
| AEY99388.1 | JN808773_p1 | peptidase S24-like protein | phrog_4 | transcriptional repressor | transcription regulation | -1 | 176 | 889 |
| AEY99399.1 | JN808773_p45 | tape measure domain protein | phrog_2335 | tail length tape measure protein | tail | 1 | 24734 | 28432 |
| AEY99375.1 | JN808773_p51 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 33080 | 33298 |
| AEY99373.1 | JN808773_p15 | hypothetical protein | phrog_7895 | unknown function | unknown function | 1 | 8243 | 8464 |
| AEY99402.1 | JN808773_p14 | hypothetical protein | phrog_1518 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 7963 | 8241 |
| AEY99417.1 | JN808773_p7 | hypothetical protein | phrog_2030 | transcriptional regulator | transcription regulation | 1 | 4887 | 5552 |
| AEY99378.1 | JN808773_p25 | hypothetical protein | phrog_2975 | Rz-like spanin | lysis | 1 | 11954 | 12355 |
| AEY99383.1 | JN808773_p41 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 22661 | 23134 |
| AEY99387.1 | JN808773_p36 | hypothetical protein | phrog_10291 | unknown function | unknown function | -1 | 19438 | 19563 |
| AEY99376.1 | JN808773_p8 | hypothetical protein | phrog_3190 | unknown function | unknown function | 1 | 5624 | 6259 |
| AEY99414.1 | JN808773_p18 | hypothetical protein | phrog_3652 | unknown function | unknown function | 1 | 8958 | 9227 |
| AEY99413.1 | JN808773_p20 | hypothetical protein | phrog_286 | unknown function | unknown function | 1 | 9591 | 9992 |
| AEY99406.1 | JN808773_p35 | hypothetical protein | phrog_3865 | unknown function | unknown function | 1 | 19118 | 19342 |
| AEY99416.1 | JN808773_p54 | hypothetical protein | phrog_2432 | unknown function | unknown function | 1 | 36640 | 36927 |
| AEY99400.1 | JN808773_p13 | hypothetical protein | phrog_6755 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7584 | 7961 |
| AEY99419.1 | JN808773_p21 | mor transcription activator family protein | phrog_836 | late transcriptional activator | transcription regulation | 1 | 9985 | 10434 |
| AEY99407.1 | JN808773_p34 | hypothetical protein | phrog_9439 | unknown function | unknown function | 1 | 18702 | 19124 |
| AEY99394.1 | JN808773_p23 | structural protein P5 | phrog_873 | endolysin | head and packaging | 1 | 11299 | 11715 |
| AEY99418.1 | JN808773_p4 | hypothetical protein | phrog_4468 | unknown function | unknown function | 1 | 1852 | 2061 |
| AEY99408.1 | JN808773_p12 | Gam-like protein | phrog_491 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7064 | 7582 |
| AEY99409.1 | JN808773_p22 | hypothetical protein | phrog_1024 | unknown function | unknown function | 1 | 10829 | 11299 |
| AEY99379.1 | JN808773_p50 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 32844 | 33083 |
| AEY99382.1 | JN808773_p3 | hypothetical protein | phrog_2345 | transcriptional regulator | transcription regulation | 1 | 1418 | 1852 |
| AEY99405.1 | JN808773_p27 | hypothetical protein | phrog_1103 | unknown function | unknown function | 1 | 12466 | 12654 |
| AEY99392.1 | JN808773_p9 | hypothetical protein | phrog_3765 | unknown function | unknown function | 1 | 6244 | 6360 |
| AEY99384.1 | JN808773_p37 | hypothetical protein | phrog_328 | head maturation protease | head and packaging | 1 | 19562 | 20659 |
| AEY99377.1 | JN808773_p2 | transcriptional regulator Ner | phrog_769 | transcriptional repressor | transcription regulation | 1 | 1059 | 1415 |