Genomic map of Pseudomonas phage JBD26 (JN811560)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JN811560
Definition
Pseudomonas phage JBD26, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
PVOG
Length
37840
Host Name
Pseudomonas
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
64.11
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AEY99451.1 JN811560_p22 hypothetical protein phrog_3648 unknown function unknown function 1 10751 11098
AEY99456.1 JN811560_p46 hypothetical protein phrog_209 portal protein head and packaging 1 23324 23803
AEY99432.1 JN811560_p2 hypothetical protein phrog_769 transcriptional repressor transcription regulation 1 1046 1390
AGC24046.1 JN811560_p39 hypothetical protein phrog_10291 unknown function unknown function -1 19822 19938
AEY99439.2 JN811560_p38 hypothetical protein phrog_3865 unknown function unknown function 1 19466 19690
AEY99455.1 JN811560_p16 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8680 8961
AEY99477.1 JN811560_p61 hypothetical protein phrog_2623 unknown function unknown function 1 37519 37743
AEY99446.1 JN811560_p54 hypothetical protein phrog_1082 tail assembly protein tail 1 30836 32539
AEY99447.2 JN811560_p44 hypothetical protein phrog_3376 unknown function unknown function 1 22711 22914
AEY99473.1 JN811560_p56 hypothetical protein phrog_1180 tail assembly chaperone tail 1 33359 33598
AEY99483.1 JN811560_p45 hypothetical protein phrog_195 head-tail adaptor connector 1 22911 23327
AEY99433.1 JN811560_p26 hypothetical protein phrog_2975 Rz-like spanin lysis 1 12168 12569
AGC24044.1 JN811560_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1827 2153
AEY99480.1 JN811560_p48 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 24003 24773
AEY99461.1 JN811560_p60 hypothetical protein phrog_2432 unknown function unknown function 1 37161 37445
AEY99479.1 JN811560_p58 hypothetical protein phrog_1101 tail protein tail 1 33803 36010
AEY99484.1 JN811560_p27 hypothetical protein phrog_8661 unknown function unknown function 1 12562 12675
AEY99434.2 JN811560_p51 phage tail tape measure protein phrog_24 tail length tape measure protein tail 1 25387 28947
AEY99458.1 JN811560_p49 hypothetical protein phrog_1442 tail assembly chaperone tail 1 24777 25262
AEY99435.1 JN811560_p34 protein F-like protein phrog_220 minor head protein and DNA pilot head and packaging 1 17117 18403
AEY99470.1 JN811560_p19 hypothetical protein phrog_4093 unknown function unknown function 1 9512 9808
AEY99452.1 JN811560_p53 hypothetical protein phrog_687 structural protein head and packaging 1 29913 30836
AEY99454.1 JN811560_p11 hypothetical protein phrog_2119 unknown function unknown function 1 6862 7275
AEY99448.1 JN811560_p9 hypothetical protein phrog_3190 unknown function unknown function 1 6126 6761
AEY99465.1 JN811560_p35 phage virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 18403 18870
AEY99469.1 JN811560_p10 hypothetical protein phrog_3765 unknown function unknown function 1 6746 6862
AEY99436.1 JN811560_p32 hypothetical protein phrog_38 terminase large subunit head and packaging 1 13864 15519
AEY99471.1 JN811560_p20 hypothetical protein phrog_286 unknown function unknown function 1 9805 10212
AEY99453.1 JN811560_p47 hypothetical protein phrog_3129 unknown function unknown function 1 23791 23970
AEY99431.1 JN811560_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5389 6054
AEY99466.1 JN811560_p12 hypothetical protein phrog_2043 unknown function unknown function 1 7277 7549
AEY99459.1 JN811560_p14 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8086 8367
AEY99474.1 JN811560_p55 hypothetical protein phrog_778 tail assembly protein tail 1 32529 33350
AEY99427.1 JN811560_p43 hypothetical protein phrog_7976 unknown function unknown function 1 22374 22676
AEY99450.1 JN811560_p24 structural protein P5 phrog_873 endolysin head and packaging 1 11513 11929
AEY99478.2 JN811560_p21 mor transcription activator family protein phrog_836 late transcriptional activator transcription regulation 1 10238 10648
AEY99437.1 JN811560_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1387 1827
AEY99445.1 JN811560_p33 hypothetical protein phrog_113 portal protein head and packaging 1 15531 17117
AGC24045.1 JN811560_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2150 2560
AEY99467.1 JN811560_p23 hypothetical protein phrog_1024 unknown function unknown function 1 11091 11513
AEY99444.1 JN811560_p1 peptidase S24-like protein phrog_4 transcriptional repressor transcription regulation -1 174 896
AEY99468.1 JN811560_p25 hypothetical protein phrog_4057 unknown function unknown function 1 11929 12171
AEY99482.1 JN811560_p59 hypothetical protein phrog_2875 virion structural protein head and packaging 1 36007 37158
AEY99449.1 JN811560_p30 hypothetical protein phrog_13614 unknown function unknown function 1 13377 13628
AEY99441.1 JN811560_p41 hypothetical protein phrog_1731 virion structural protein head and packaging 1 21026 21424
AEY99485.1 JN811560_p31 hypothetical protein phrog_14530 unknown function unknown function -1 13582 13833
AEY99462.1 JN811560_p17 hypothetical protein phrog_3223 unknown function unknown function 1 8963 9169
AEY99472.1 JN811560_p18 hypothetical protein phrog_3652 unknown function unknown function 1 9172 9441
AEY99464.1 JN811560_p36 hypothetical protein phrog_8786 type I-E anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 18983 19180
AEY99442.1 JN811560_p37 hypothetical protein phrog_9769 type I-F anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 19177 19479
AEY99438.1 JN811560_p42 major head protein,subunit phrog_371 major head protein head and packaging 1 21452 22360
AEY99481.1 JN811560_p6 DNA-binding domain protein phrog_310 transposase integration and excision 1 2553 4625
AEY99430.1 JN811560_p52 hypothetical protein phrog_687 structural protein head and packaging 1 28955 29911
AEY99429.1 JN811560_p50 hypothetical protein phrog_10839 unknown function unknown function 1 25262 25390
AEY99463.1 JN811560_p28 hypothetical protein phrog_1103 unknown function unknown function 1 12680 12868
AEY99457.1 JN811560_p13 Gam-like protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7566 8084
AEY99460.1 JN811560_p40 hypothetical protein phrog_328 head maturation protease head and packaging 1 19910 21016
AEY99440.1 JN811560_p29 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12877 13377
AEY99475.1 JN811560_p7 ATPase, AAA family phrog_296 DNA transposition protein integration and excision 1 4640 5392
AEY99428.1 JN811560_p15 hypothetical protein phrog_4367 unknown function unknown function 1 8369 8677
AEY99443.1 JN811560_p57 hypothetical protein phrog_1196 tail assembly chaperone tail 1 33595 33813