| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JN859129 |
Definition |
Mycobacterium virus DotProduct, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
PVOG |
Length |
55363 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
61.75 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AER14051.1 | JN859129_p4 | head assembly protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3613 | 4368 |
| AER14077.1 | JN859129_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26315 | 27508 |
| AER14099.1 | JN859129_p53 | HTH domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38248 | 38595 |
| AER14074.1 | JN859129_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25719 | 25868 |
| AER14054.1 | JN859129_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5884 | 6450 |
| AER14073.1 | JN859129_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25416 | 25712 |
| AER14065.1 | JN859129_p18 | major tail subunit | phrog_346 | minor tail protein | tail | 1 | 17408 | 19939 |
| AER14066.1 | JN859129_p19 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19936 | 21822 |
| AER14127.1 | JN859129_p84 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 48881 | 49219 |
| AER14116.1 | JN859129_p72 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46308 | 46571 |
| AER14105.1 | JN859129_p61 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 41161 | 41346 |
| AER14056.1 | JN859129_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6782 | 7111 |
| AER14071.1 | JN859129_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24269 | 25078 |
| AER14101.1 | JN859129_p55 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 38942 | 39589 |
| AER14057.1 | JN859129_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7098 | 7505 |
| AER14103.1 | JN859129_p58 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 39968 | 40213 |
| AER14121.1 | JN859129_p77 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 47382 | 47660 |
| AER14089.1 | JN859129_p43 | HTH domain protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 34143 | 34472 |
| AER14123.1 | JN859129_p79 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 47850 | 48053 |
| AER14067.1 | JN859129_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21819 | 22985 |
| AER14081.1 | JN859129_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29152 | 29385 |
| AER14125.1 | JN859129_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 48547 | 48747 |
| AER14095.1 | JN859129_p49 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 36494 | 37054 |
| AER14129.1 | JN859129_p86 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 49561 | 49812 |
| AER14091.1 | JN859129_p45 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 35532 | 35747 |
| AER14049.1 | JN859129_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 588 | 2225 |
| AER14126.1 | JN859129_p83 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 48747 | 48884 |
| AER14075.1 | JN859129_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25865 | 26005 |
| AER14110.1 | JN859129_p66 | hypothetical protein | phrog_8485 | unknown function | unknown function | -1 | 43933 | 44310 |
| AER14053.1 | JN859129_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5063 | 5884 |
| AER14088.1 | JN859129_p42 | hypothetical protein | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 33480 | 34013 |
| AER14048.1 | JN859129_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 110 | 565 |
| AER14134.1 | JN859129_p91 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 51109 | 51300 |
| AER14080.1 | JN859129_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28753 | 29127 |
| AER14104.1 | JN859129_p59 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 40227 | 40805 |
| AER14145.1 | JN859129_p80 | hypothetical protein | phrog_38387 | unknown function | unknown function | 1 | 48127 | 48210 |
| AER14124.1 | JN859129_p81 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 48290 | 48571 |
| AER14084.1 | JN859129_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30491 | 30586 |
| AER14119.1 | JN859129_p75 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 46947 | 47108 |
| AER14120.1 | JN859129_p76 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 47105 | 47389 |
| AER14122.1 | JN859129_p78 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 47657 | 47824 |
| AER14090.1 | JN859129_p44 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 34531 | 35535 |
| AER14118.1 | JN859129_p74 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46756 | 46950 |
| AER14076.1 | JN859129_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26067 | 26318 |
| AER14069.1 | JN859129_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23367 | 23621 |
| AER14082.1 | JN859129_p35 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29372 | 30193 |
| AER14140.1 | JN859129_p97 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 54063 | 54275 |
| AER14059.1 | JN859129_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8578 | 9129 |
| AER14068.1 | JN859129_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23003 | 23344 |
| AER14112.1 | JN859129_p68 | hypothetical protein | phrog_10510 | unknown function | unknown function | 1 | 44633 | 44908 |
| AER14143.1 | JN859129_p56 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 39589 | 39744 |
| AER14108.1 | JN859129_p64 | hypothetical protein | phrog_116 | DNA methyltransferase | other | 1 | 41819 | 43810 |
| AER14113.1 | JN859129_p69 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 44905 | 45054 |
| AER14072.1 | JN859129_p25 | hypothetical protein | phrog_37923 | unknown function | unknown function | 1 | 25162 | 25323 |
| AER14083.1 | JN859129_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30211 | 30501 |
| AER14079.1 | JN859129_p32 | holin | phrog_443 | holin | lysis | 1 | 28523 | 28756 |
| AER14100.1 | JN859129_p54 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38592 | 38945 |
| AER14058.1 | JN859129_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7632 | 8441 |
| AER14128.1 | JN859129_p85 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 49272 | 49568 |
| AER14055.1 | JN859129_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6447 | 6779 |
| AER14060.1 | JN859129_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8578 | 9514 |
| AER14098.1 | JN859129_p52 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 37748 | 38251 |
| AER14135.1 | JN859129_p92 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 51297 | 51698 |
| AER14114.1 | JN859129_p70 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 45051 | 45197 |
| AER14115.1 | JN859129_p71 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45337 | 46311 |
| AER14062.1 | JN859129_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 13022 | 14731 |
| AER14093.1 | JN859129_p47 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 36024 | 36212 |
| AER14052.1 | JN859129_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4394 | 5044 |
| AER14111.1 | JN859129_p67 | hypothetical protein | phrog_8611 | unknown function | unknown function | -1 | 44317 | 44634 |
| AER14097.1 | JN859129_p51 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37410 | 37757 |
| AER14063.1 | JN859129_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 14816 | 16525 |
| AER14130.1 | JN859129_p87 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 49809 | 50453 |
| AER14138.1 | JN859129_p95 | polypeptide N-acetylgalactosaminyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 52108 | 53544 |
| AER14094.1 | JN859129_p48 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 36209 | 36451 |
| AER14106.1 | JN859129_p62 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 41324 | 41479 |
| AER14142.1 | JN859129_p38 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 30688 | 30834 |
| AER14132.1 | JN859129_p89 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 50784 | 50948 |
| AER14141.1 | JN859129_p98 | N-acetylglucosaminyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54272 | 54895 |
| AER14061.1 | JN859129_p14 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9533 | 13021 |
| AER14087.1 | JN859129_p41 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 32762 | 33217 |
| AER14086.1 | JN859129_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 31396 | 32685 |
| AER14137.1 | JN859129_p94 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 51930 | 52091 |
| AER14144.1 | JN859129_p60 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40802 | 41164 |
| AER14133.1 | JN859129_p90 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 50954 | 51112 |
| AER14092.1 | JN859129_p46 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35833 | 36027 |
| AER14050.1 | JN859129_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2256 | 3626 |
| AER14085.1 | JN859129_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 30834 | 31001 |
| AER14107.1 | JN859129_p63 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 41553 | 41822 |
| AER14109.1 | JN859129_p65 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 43779 | 43940 |
| AER14064.1 | JN859129_p17 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 16563 | 17411 |
| AER14139.1 | JN859129_p96 | Ser/Thr kinase | phrog_3297 | kinase | other | 1 | 53549 | 54022 |
| AER14070.1 | JN859129_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23634 | 24272 |
| AER14136.1 | JN859129_p93 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 51695 | 51937 |
| AER14096.1 | JN859129_p50 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 37132 | 37413 |
| AER14102.1 | JN859129_p57 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39741 | 39971 |
| AER14078.1 | JN859129_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27508 | 28509 |
| AER14117.1 | JN859129_p73 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 46568 | 46759 |
| AER14131.1 | JN859129_p88 | MerR-like protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 50563 | 50787 |